RNA–Protein interactions for RNA: ENST00000480911.5

CACNA1C-225, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5 BASIC

Gene CACNA1C, Length 6,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-225ENST00000480911 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.12□□□□□ -1.91
CACNA1C-225ENST00000480911 LCE2AQ5TA79 106 aaPredicted RBP3.1□□□□□ -1.91
CACNA1C-225ENST00000480911 MT1LQ93083 61 aa3.1□□□□□ -1.91
CACNA1C-225ENST00000480911 LCE1DQ5T752 114 aa3.09□□□□□ -1.91
CACNA1C-225ENST00000480911 KRTAP19-3Q7Z4W3 81 aa3.06□□□□□ -1.92
CACNA1C-225ENST00000480911 KRTAP2-1Q9BYU5 128 aa3.05□□□□□ -1.92
CACNA1C-225ENST00000480911 FLGP20930 4061 aaPredicted RBP3.05□□□□□ -1.92
CACNA1C-225ENST00000480911 KRTAP4-8A0A0G2JLE6 195 aa3.05□□□□□ -1.92
CACNA1C-225ENST00000480911 KRTAP4-8Q9BYQ9 185 aa3.05□□□□□ -1.92
CACNA1C-225ENST00000480911 MT1EP04732 61 aa3.04□□□□□ -1.92
CACNA1C-225ENST00000480911 RNF213Q63HN8 5207 aa3.03□□□□□ -1.92
CACNA1C-225ENST00000480911 LCE5AQ5TCM9 118 aa3.02□□□□□ -1.93
CACNA1C-225ENST00000480911 HMCN2Q8NDA2 5059 aa2.99□□□□□ -1.93
CACNA1C-225ENST00000480911 KRTAP2-2Q9BYT5 123 aa2.99□□□□□ -1.93
CACNA1C-225ENST00000480911 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
CACNA1C-225ENST00000480911 PRM1P04553 51 aa2.97□□□□□ -1.93
CACNA1C-225ENST00000480911 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
CACNA1C-225ENST00000480911 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
CACNA1C-225ENST00000480911 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
CACNA1C-225ENST00000480911 LCE1AQ5T7P2 110 aa2.95□□□□□ -1.94
CACNA1C-225ENST00000480911 MT3P25713 68 aa2.95□□□□□ -1.94
CACNA1C-225ENST00000480911 KRTAP19-7Q3SYF9 63 aa2.91□□□□□ -1.94
CACNA1C-225ENST00000480911 UBR4Q5T4S7 5183 aa2.89□□□□□ -1.95
CACNA1C-225ENST00000480911 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
CACNA1C-225ENST00000480911 MUC2Q02817 5179 aa2.85□□□□□ -1.95
CACNA1C-225ENST00000480911 MT1MQ8N339 61 aa2.84□□□□□ -1.96
CACNA1C-225ENST00000480911 KRTAP4-7Q9BYR0 210 aa2.84□□□□□ -1.96
CACNA1C-225ENST00000480911 MT1AP04731 61 aa2.8□□□□□ -1.96
CACNA1C-225ENST00000480911 KRTAP4-9Q9BYQ8 210 aa2.8□□□□□ -1.96
CACNA1C-225ENST00000480911 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
CACNA1C-225ENST00000480911 FSIP2Q5CZC0 6907 aa2.71□□□□□ -1.98
CACNA1C-225ENST00000480911 SYNE2Q8WXH0 6885 aaKnown RBP2.71□□□□□ -1.98
CACNA1C-225ENST00000480911 LOC100996750A0A140TA64 210 aa2.67□□□□□ -1.98
CACNA1C-225ENST00000480911 KRTAP4-3Q9BYR4 195 aa2.67□□□□□ -1.98
CACNA1C-225ENST00000480911 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
CACNA1C-225ENST00000480911 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
CACNA1C-225ENST00000480911 USH2AO75445 5202 aa2.56□□□□□ -2
CACNA1C-225ENST00000480911 KRTAP9-4Q9BYQ2 154 aa2.46□□□□□ -2.01
CACNA1C-225ENST00000480911 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
CACNA1C-225ENST00000480911 KMT2DO14686 5537 aa2.44□□□□□ -2.02
CACNA1C-225ENST00000480911 KRTAP5-9P26371 169 aa2.43□□□□□ -2.02
CACNA1C-225ENST00000480911 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
CACNA1C-225ENST00000480911 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
CACNA1C-225ENST00000480911 NEBP20929 6669 aa2.37□□□□□ -2.03
CACNA1C-225ENST00000480911 SSPOA2VEC9 5147 aa2.36□□□□□ -2.03
CACNA1C-225ENST00000480911 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
CACNA1C-225ENST00000480911 MACF1Q9UPN3 7388 aaKnown RBP2.27□□□□□ -2.05
CACNA1C-225ENST00000480911 FCGBPQ9Y6R7 5405 aaPredicted RBP2.27□□□□□ -2.05
CACNA1C-225ENST00000480911 KRTAP4-6Q9BYQ5 205 aa2.24□□□□□ -2.05
CACNA1C-225ENST00000480911 MUC12Q9UKN1 5478 aa2.22□□□□□ -2.05
CACNA1C-225ENST00000480911 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.06
CACNA1C-225ENST00000480911 KRTAP4-11Q9BYQ6 195 aa2.19□□□□□ -2.06
CACNA1C-225ENST00000480911 DSTQ03001 7570 aaKnown RBP2.17□□□□□ -2.06
CACNA1C-225ENST00000480911 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
CACNA1C-225ENST00000480911 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
CACNA1C-225ENST00000480911 KRTAP4-12Q9BQ66 201 aa2.09□□□□□ -2.08
CACNA1C-225ENST00000480911 KRTAP4-2Q9BYR5 136 aa2.09□□□□□ -2.08
CACNA1C-225ENST00000480911 MDN1Q9NU22 5596 aa2.06□□□□□ -2.08
CACNA1C-225ENST00000480911 KRTAP5-3Q6L8H2 238 aa2.03□□□□□ -2.08
CACNA1C-225ENST00000480911 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
CACNA1C-225ENST00000480911 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
CACNA1C-225ENST00000480911 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
CACNA1C-225ENST00000480911 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
CACNA1C-225ENST00000480911 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
CACNA1C-225ENST00000480911 HMCN1Q96RW7 5635 aa1.79□□□□□ -2.12
CACNA1C-225ENST00000480911 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
CACNA1C-225ENST00000480911 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
CACNA1C-225ENST00000480911 AHNAK2Q8IVF2 5795 aa1.71□□□□□ -2.14
CACNA1C-225ENST00000480911 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
CACNA1C-225ENST00000480911 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.63□□□□□ -2.15
CACNA1C-225ENST00000480911 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
CACNA1C-225ENST00000480911 KRTAP5-11Q6L8G4 156 aa1.55□□□□□ -2.16
CACNA1C-225ENST00000480911 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
CACNA1C-225ENST00000480911 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
CACNA1C-225ENST00000480911 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
CACNA1C-225ENST00000480911 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.19
CACNA1C-225ENST00000480911 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 43.7 ms