RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 SPRR2AP35326 72 aa4.76□□□□□ -1.65
COL20A1-206ENST00000479501 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
COL20A1-206ENST00000479501 KRTAP19-6Q3LI70 58 aa4.74□□□□□ -1.65
COL20A1-206ENST00000479501 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
COL20A1-206ENST00000479501 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
COL20A1-206ENST00000479501 MT1MQ8N339 61 aa4.59□□□□□ -1.67
COL20A1-206ENST00000479501 SPRR2DP22532 72 aa4.58□□□□□ -1.68
COL20A1-206ENST00000479501 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
COL20A1-206ENST00000479501 KRTAP4-3Q9BYR4 195 aa4.52□□□□□ -1.69
COL20A1-206ENST00000479501 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
COL20A1-206ENST00000479501 LCE2DQ5TA82 110 aaPredicted RBP4.49□□□□□ -1.69
COL20A1-206ENST00000479501 KRTAP9-2Q9BYQ4 174 aa4.45□□□□□ -1.7
COL20A1-206ENST00000479501 USH2AO75445 5202 aa4.37□□□□□ -1.71
COL20A1-206ENST00000479501 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
COL20A1-206ENST00000479501 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.71
COL20A1-206ENST00000479501 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.71
COL20A1-206ENST00000479501 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
COL20A1-206ENST00000479501 PRM1P04553 51 aa4.31□□□□□ -1.72
COL20A1-206ENST00000479501 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
COL20A1-206ENST00000479501 KMT2DO14686 5537 aa4.25□□□□□ -1.73
COL20A1-206ENST00000479501 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
COL20A1-206ENST00000479501 MT1AP04731 61 aa4.21□□□□□ -1.74
COL20A1-206ENST00000479501 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
COL20A1-206ENST00000479501 MT3P25713 68 aa4.2□□□□□ -1.74
COL20A1-206ENST00000479501 LCE5AQ5TCM9 118 aa4.19□□□□□ -1.74
COL20A1-206ENST00000479501 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
COL20A1-206ENST00000479501 KRTAP4-9Q9BYQ8 210 aa4.12□□□□□ -1.75
COL20A1-206ENST00000479501 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
COL20A1-206ENST00000479501 KRTAP9-6A0A140TA67 174 aa4.09□□□□□ -1.76
COL20A1-206ENST00000479501 MT4P47944 62 aa4.07□□□□□ -1.76
COL20A1-206ENST00000479501 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
COL20A1-206ENST00000479501 SSPOA2VEC9 5147 aa4.03□□□□□ -1.76
COL20A1-206ENST00000479501 MUC12Q9UKN1 5478 aa4□□□□□ -1.77
COL20A1-206ENST00000479501 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
COL20A1-206ENST00000479501 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
COL20A1-206ENST00000479501 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.91□□□□□ -1.78
COL20A1-206ENST00000479501 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
COL20A1-206ENST00000479501 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
COL20A1-206ENST00000479501 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
COL20A1-206ENST00000479501 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
COL20A1-206ENST00000479501 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
COL20A1-206ENST00000479501 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
COL20A1-206ENST00000479501 KRTAP20-1Q3LI63 56 aa3.73□□□□□ -1.81
COL20A1-206ENST00000479501 LCE4AQ5TA78 99 aa3.69□□□□□ -1.82
COL20A1-206ENST00000479501 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
COL20A1-206ENST00000479501 MDN1Q9NU22 5596 aa3.58□□□□□ -1.84
COL20A1-206ENST00000479501 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
COL20A1-206ENST00000479501 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
COL20A1-206ENST00000479501 KRTAP4-6Q9BYQ5 205 aa3.41□□□□□ -1.86
COL20A1-206ENST00000479501 NEBP20929 6669 aa3.4□□□□□ -1.87
COL20A1-206ENST00000479501 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.88
COL20A1-206ENST00000479501 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
COL20A1-206ENST00000479501 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
COL20A1-206ENST00000479501 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
COL20A1-206ENST00000479501 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
COL20A1-206ENST00000479501 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
COL20A1-206ENST00000479501 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
COL20A1-206ENST00000479501 KRTAP9-9Q9BYP9 154 aa3□□□□□ -1.93
COL20A1-206ENST00000479501 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
COL20A1-206ENST00000479501 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
COL20A1-206ENST00000479501 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
COL20A1-206ENST00000479501 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
COL20A1-206ENST00000479501 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
COL20A1-206ENST00000479501 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
COL20A1-206ENST00000479501 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
COL20A1-206ENST00000479501 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
COL20A1-206ENST00000479501 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
COL20A1-206ENST00000479501 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
COL20A1-206ENST00000479501 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
COL20A1-206ENST00000479501 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
COL20A1-206ENST00000479501 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
COL20A1-206ENST00000479501 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
COL20A1-206ENST00000479501 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
COL20A1-206ENST00000479501 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
COL20A1-206ENST00000479501 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
COL20A1-206ENST00000479501 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
COL20A1-206ENST00000479501 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
COL20A1-206ENST00000479501 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 73.8 ms