RNA–Protein interactions for RNA: ENST00000478631.6

SCP2-210, Transcript of sterol carrier protein 2, humanhuman

TSL 2

Gene SCP2, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-210ENST00000478631 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.78
SCP2-210ENST00000478631 HMCN2Q8NDA2 5059 aa3.86□□□□□ -1.79
SCP2-210ENST00000478631 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
SCP2-210ENST00000478631 KRTAP19-6Q3LI70 58 aa3.83□□□□□ -1.8
SCP2-210ENST00000478631 MT1MQ8N339 61 aa3.82□□□□□ -1.8
SCP2-210ENST00000478631 LCE2AQ5TA79 106 aaPredicted RBP3.79□□□□□ -1.8
SCP2-210ENST00000478631 MUC2Q02817 5179 aa3.76□□□□□ -1.81
SCP2-210ENST00000478631 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
SCP2-210ENST00000478631 LOC100996750A0A140TA64 210 aa3.75□□□□□ -1.81
SCP2-210ENST00000478631 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
SCP2-210ENST00000478631 KRTAP9-2Q9BYQ4 174 aa3.68□□□□□ -1.82
SCP2-210ENST00000478631 LCE2DQ5TA82 110 aaPredicted RBP3.67□□□□□ -1.82
SCP2-210ENST00000478631 MT3P25713 68 aa3.64□□□□□ -1.83
SCP2-210ENST00000478631 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
SCP2-210ENST00000478631 MT4P47944 62 aa3.57□□□□□ -1.84
SCP2-210ENST00000478631 PRM1P04553 51 aa3.53□□□□□ -1.84
SCP2-210ENST00000478631 MT1AP04731 61 aa3.53□□□□□ -1.84
SCP2-210ENST00000478631 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
SCP2-210ENST00000478631 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
SCP2-210ENST00000478631 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
SCP2-210ENST00000478631 SYNE2Q8WXH0 6885 aaKnown RBP3.5□□□□□ -1.85
SCP2-210ENST00000478631 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
SCP2-210ENST00000478631 KRTAP4-9Q9BYQ8 210 aa3.49□□□□□ -1.85
SCP2-210ENST00000478631 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
SCP2-210ENST00000478631 USH2AO75445 5202 aa3.42□□□□□ -1.86
SCP2-210ENST00000478631 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
SCP2-210ENST00000478631 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
SCP2-210ENST00000478631 KRTAP9-6A0A140TA67 174 aa3.4□□□□□ -1.87
SCP2-210ENST00000478631 LCE5AQ5TCM9 118 aa3.37□□□□□ -1.87
SCP2-210ENST00000478631 LCE1AQ5T7P2 110 aa3.36□□□□□ -1.87
SCP2-210ENST00000478631 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
SCP2-210ENST00000478631 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
SCP2-210ENST00000478631 KRTAP6-3Q3LI67 103 aa3.28□□□□□ -1.88
SCP2-210ENST00000478631 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
SCP2-210ENST00000478631 KMT2DO14686 5537 aa3.26□□□□□ -1.89
SCP2-210ENST00000478631 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
SCP2-210ENST00000478631 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
SCP2-210ENST00000478631 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.21□□□□□ -1.9
SCP2-210ENST00000478631 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
SCP2-210ENST00000478631 MACF1Q9UPN3 7388 aaKnown RBP3.15□□□□□ -1.91
SCP2-210ENST00000478631 LCE4AQ5TA78 99 aa3.11□□□□□ -1.91
SCP2-210ENST00000478631 MUC12Q9UKN1 5478 aa3.11□□□□□ -1.91
SCP2-210ENST00000478631 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
SCP2-210ENST00000478631 SSPOA2VEC9 5147 aa3.04□□□□□ -1.92
SCP2-210ENST00000478631 MDN1Q9NU22 5596 aa2.98□□□□□ -1.93
SCP2-210ENST00000478631 KRTAP5-9P26371 169 aa2.93□□□□□ -1.94
SCP2-210ENST00000478631 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
SCP2-210ENST00000478631 NEBP20929 6669 aa2.89□□□□□ -1.95
SCP2-210ENST00000478631 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
SCP2-210ENST00000478631 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
SCP2-210ENST00000478631 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
SCP2-210ENST00000478631 KRTAP4-6Q9BYQ5 205 aa2.79□□□□□ -1.96
SCP2-210ENST00000478631 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
SCP2-210ENST00000478631 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
SCP2-210ENST00000478631 KRTAP4-11Q9BYQ6 195 aa2.63□□□□□ -1.99
SCP2-210ENST00000478631 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
SCP2-210ENST00000478631 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
SCP2-210ENST00000478631 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
SCP2-210ENST00000478631 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
SCP2-210ENST00000478631 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
SCP2-210ENST00000478631 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
SCP2-210ENST00000478631 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.03
SCP2-210ENST00000478631 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
SCP2-210ENST00000478631 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
SCP2-210ENST00000478631 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
SCP2-210ENST00000478631 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
SCP2-210ENST00000478631 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
SCP2-210ENST00000478631 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
SCP2-210ENST00000478631 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
SCP2-210ENST00000478631 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
SCP2-210ENST00000478631 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
SCP2-210ENST00000478631 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
SCP2-210ENST00000478631 KRTAP21-2Q3LI59 83 aa1.77□□□□□ -2.13
SCP2-210ENST00000478631 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
SCP2-210ENST00000478631 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
SCP2-210ENST00000478631 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
SCP2-210ENST00000478631 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
SCP2-210ENST00000478631 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms