RNA–Protein interactions for RNA: ENST00000475651.5

RBM39-229, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-229ENST00000475651 LRP2P98164 4655 aa1.81□□□□□ -2.12
RBM39-229ENST00000475651 KRTAP10-10P60014 251 aa1.79□□□□□ -2.12
RBM39-229ENST00000475651 LPAP08519 4548 aa1.78□□□□□ -2.12
RBM39-229ENST00000475651 KRTAP19-2Q3LHN2 52 aa1.78□□□□□ -2.12
RBM39-229ENST00000475651 HMCN1Q96RW7 5635 aa1.78□□□□□ -2.12
RBM39-229ENST00000475651 SPRR2GQ9BYE4 73 aa1.76□□□□□ -2.13
RBM39-229ENST00000475651 MUC17Q685J3 4493 aa1.74□□□□□ -2.13
RBM39-229ENST00000475651 PRO2289Q9P1D8 64 aa1.73□□□□□ -2.13
RBM39-229ENST00000475651 EPPK1P58107 5090 aaKnown RBP1.72□□□□□ -2.13
RBM39-229ENST00000475651 MT1HP80294 61 aa1.71□□□□□ -2.14
RBM39-229ENST00000475651 HERC2O95714 4834 aa1.7□□□□□ -2.14
RBM39-229ENST00000475651 ABCA13Q86UQ4 5058 aa1.7□□□□□ -2.14
RBM39-229ENST00000475651 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
RBM39-229ENST00000475651 FLGP20930 4061 aaPredicted RBP1.7□□□□□ -2.14
RBM39-229ENST00000475651 MT2AP02795 61 aa1.69□□□□□ -2.14
RBM39-229ENST00000475651 MT1FP04733 61 aa1.68□□□□□ -2.14
RBM39-229ENST00000475651 SPRR5A0A1B0GTR4 108 aa1.67□□□□□ -2.14
RBM39-229ENST00000475651 KRTAP19-8Q3LI54 63 aa1.67□□□□□ -2.14
RBM39-229ENST00000475651 BIRC6Q9NR09 4857 aa1.66□□□□□ -2.14
RBM39-229ENST00000475651 HERC1Q15751 4861 aa1.65□□□□□ -2.15
RBM39-229ENST00000475651 KRTAP8-1Q8IUC2 63 aa1.65□□□□□ -2.15
RBM39-229ENST00000475651 KRTAP12-3P60328 96 aa1.64□□□□□ -2.15
RBM39-229ENST00000475651 INE1O15225 51 aa1.62□□□□□ -2.15
RBM39-229ENST00000475651 MT1XP80297 61 aa1.61□□□□□ -2.15
RBM39-229ENST00000475651 MT1BP07438 61 aa1.6□□□□□ -2.15
RBM39-229ENST00000475651 HMCN2Q8NDA2 5059 aa1.58□□□□□ -2.16
RBM39-229ENST00000475651 MUC2Q02817 5179 aa1.57□□□□□ -2.16
RBM39-229ENST00000475651 KRTAP19-5Q3LI72 72 aa1.54□□□□□ -2.16
RBM39-229ENST00000475651 PCLOQ9Y6V0 5065 aa1.54□□□□□ -2.16
RBM39-229ENST00000475651 FAT4Q6V0I7 4981 aa1.51□□□□□ -2.17
RBM39-229ENST00000475651 RNF213Q63HN8 5207 aa1.49□□□□□ -2.17
RBM39-229ENST00000475651 CRCT1Q9UGL9 99 aa1.49□□□□□ -2.17
RBM39-229ENST00000475651 UBR4Q5T4S7 5183 aa1.44□□□□□ -2.18
RBM39-229ENST00000475651 KRTAP12-4P60329 112 aa1.42□□□□□ -2.18
RBM39-229ENST00000475651 MT1EP04732 61 aa1.41□□□□□ -2.18
RBM39-229ENST00000475651 KRTAP19-7Q3SYF9 63 aa1.41□□□□□ -2.18
RBM39-229ENST00000475651 MT1LQ93083 61 aa1.41□□□□□ -2.18
RBM39-229ENST00000475651 KRTAP19-6Q3LI70 58 aa1.39□□□□□ -2.19
RBM39-229ENST00000475651 KRTAP2-3P0C7H8 128 aa1.38□□□□□ -2.19
RBM39-229ENST00000475651 KRTAP2-4Q9BYR9 128 aa1.38□□□□□ -2.19
RBM39-229ENST00000475651 KRTAP2-1Q9BYU5 128 aa1.38□□□□□ -2.19
RBM39-229ENST00000475651 MT1GP13640 62 aa1.36□□□□□ -2.19
RBM39-229ENST00000475651 KRTAP19-3Q7Z4W3 81 aa1.34□□□□□ -2.19
RBM39-229ENST00000475651 MT1MQ8N339 61 aa1.32□□□□□ -2.2
RBM39-229ENST00000475651 SPRR2FQ96RM1 72 aa1.31□□□□□ -2.2
RBM39-229ENST00000475651 USH2AO75445 5202 aa1.28□□□□□ -2.2
RBM39-229ENST00000475651 SSPOA2VEC9 5147 aa1.26□□□□□ -2.21
RBM39-229ENST00000475651 KMT2DO14686 5537 aa1.26□□□□□ -2.21
RBM39-229ENST00000475651 FCGBPQ9Y6R7 5405 aaPredicted RBP1.25□□□□□ -2.21
RBM39-229ENST00000475651 MT1AP04731 61 aa1.23□□□□□ -2.21
RBM39-229ENST00000475651 SPRR2EP22531 72 aa1.21□□□□□ -2.22
RBM39-229ENST00000475651 SPRR2BP35325 72 aa1.21□□□□□ -2.22
RBM39-229ENST00000475651 SPRR2AP35326 72 aa1.21□□□□□ -2.22
RBM39-229ENST00000475651 KRTAP6-1Q3LI64 71 aa1.18□□□□□ -2.22
RBM39-229ENST00000475651 SPRR2DP22532 72 aa1.17□□□□□ -2.22
RBM39-229ENST00000475651 FSIP2Q5CZC0 6907 aa1.13□□□□□ -2.23
RBM39-229ENST00000475651 PRM1P04553 51 aa1.12□□□□□ -2.23
RBM39-229ENST00000475651 MUC12Q9UKN1 5478 aa1.11□□□□□ -2.23
RBM39-229ENST00000475651 KRTAP6-3Q3LI67 103 aa1.1□□□□□ -2.23
RBM39-229ENST00000475651 KRTAP6-2Q3LI66 62 aa1.08□□□□□ -2.24
RBM39-229ENST00000475651 MACF1Q9UPN3 7388 aaKnown RBP1.08□□□□□ -2.24
RBM39-229ENST00000475651 DSTQ03001 7570 aaKnown RBP1.05□□□□□ -2.24
RBM39-229ENST00000475651 MT4P47944 62 aa1□□□□□ -2.25
RBM39-229ENST00000475651 SYNE1Q8NF91 8797 aaKnown RBP0.99□□□□□ -2.25
RBM39-229ENST00000475651 MDN1Q9NU22 5596 aa0.98□□□□□ -2.25
RBM39-229ENST00000475651 SYNE2Q8WXH0 6885 aaKnown RBP0.96□□□□□ -2.26
RBM39-229ENST00000475651 KRTAP20-2Q3LI61 65 aa0.95□□□□□ -2.26
RBM39-229ENST00000475651 KRTAP20-1Q3LI63 56 aa0.94□□□□□ -2.26
RBM39-229ENST00000475651 NEBP20929 6669 aa0.84□□□□□ -2.27
RBM39-229ENST00000475651 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
RBM39-229ENST00000475651 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
RBM39-229ENST00000475651 MUC5ACP98088 5654 aa0.77□□□□□ -2.29
RBM39-229ENST00000475651 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
RBM39-229ENST00000475651 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
RBM39-229ENST00000475651 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
RBM39-229ENST00000475651 GPR98Q8WXG9 6306 aa0.67□□□□□ -2.3
RBM39-229ENST00000475651 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
RBM39-229ENST00000475651 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 9.9 ms