RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 CHKB-CPT1BH3BT56 60 aa2.67□□□□□ -1.98
PTP4A1-202ENST00000470661 KRTAP13-4Q3LI77 160 aa2.67□□□□□ -1.98
PTP4A1-202ENST00000470661 SMIM20Q8N5G0 67 aa2.65□□□□□ -1.99
PTP4A1-202ENST00000470661 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
PTP4A1-202ENST00000470661 SERP2Q8N6R1 65 aa2.62□□□□□ -1.99
PTP4A1-202ENST00000470661 SPTSSBQ8NFR3 76 aa2.62□□□□□ -1.99
PTP4A1-202ENST00000470661 CYSTM1Q9H1C7 97 aa2.62□□□□□ -1.99
PTP4A1-202ENST00000470661 KRTAP2-3P0C7H8 128 aa2.61□□□□□ -1.99
PTP4A1-202ENST00000470661 KRTAP2-4Q9BYR9 128 aa2.61□□□□□ -1.99
PTP4A1-202ENST00000470661 A0A0D9SG42 100 aa2.6□□□□□ -1.99
PTP4A1-202ENST00000470661 COA5Q86WW8 74 aa2.6□□□□□ -1.99
PTP4A1-202ENST00000470661 SPRR2DP22532 72 aa2.58□□□□□ -2
PTP4A1-202ENST00000470661 SPATA8Q6RVD6 105 aa2.58□□□□□ -2
PTP4A1-202ENST00000470661 SPANXA2-OT1Q8N9U9 137 aa2.58□□□□□ -2
PTP4A1-202ENST00000470661 V9GYY9 64 aa2.56□□□□□ -2
PTP4A1-202ENST00000470661 COX7CP15954 63 aa2.54□□□□□ -2
PTP4A1-202ENST00000470661 H7BZZ5 65 aa2.53□□□□□ -2
PTP4A1-202ENST00000470661 SPINT4Q6UDR6 99 aa2.53□□□□□ -2
PTP4A1-202ENST00000470661 KRTAP2-1Q9BYU5 128 aa2.53□□□□□ -2
PTP4A1-202ENST00000470661 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
PTP4A1-202ENST00000470661 A0A1B0GU33 70 aa2.5□□□□□ -2.01
PTP4A1-202ENST00000470661 SERP1Q9Y6X1 66 aa2.5□□□□□ -2.01
PTP4A1-202ENST00000470661 CCDC179H3BU77 68 aa2.49□□□□□ -2.01
PTP4A1-202ENST00000470661 KRTAP12-1P59990 96 aa2.49□□□□□ -2.01
PTP4A1-202ENST00000470661 KRTAP19-7Q3SYF9 63 aa2.49□□□□□ -2.01
PTP4A1-202ENST00000470661 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
PTP4A1-202ENST00000470661 MT1EP04732 61 aa2.46□□□□□ -2.02
PTP4A1-202ENST00000470661 KRTAP19-5Q3LI72 72 aa2.46□□□□□ -2.02
PTP4A1-202ENST00000470661 ANAPC13Q9BS18 74 aa2.46□□□□□ -2.02
PTP4A1-202ENST00000470661 A0A1B0GU69 56 aa2.43□□□□□ -2.02
PTP4A1-202ENST00000470661 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
PTP4A1-202ENST00000470661 C10orf95Q9H7T3 257 aa2.42□□□□□ -2.02
PTP4A1-202ENST00000470661 DSTQ03001 7570 aaKnown RBP2.41□□□□□ -2.02
PTP4A1-202ENST00000470661 KRTAP12-3P60328 96 aa2.39□□□□□ -2.03
PTP4A1-202ENST00000470661 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
PTP4A1-202ENST00000470661 SMIM26A0A096LP01 95 aa2.37□□□□□ -2.03
PTP4A1-202ENST00000470661 PSPHP1O15172 72 aa2.35□□□□□ -2.03
PTP4A1-202ENST00000470661 MT1MQ8N339 61 aa2.35□□□□□ -2.03
PTP4A1-202ENST00000470661 MT1LQ93083 61 aa2.35□□□□□ -2.03
PTP4A1-202ENST00000470661 MT1GP13640 62 aa2.34□□□□□ -2.03
PTP4A1-202ENST00000470661 PRO0628Q9UI54 55 aa2.33□□□□□ -2.04
PTP4A1-202ENST00000470661 LINC01558Q9Y6Z2 57 aa2.33□□□□□ -2.04
PTP4A1-202ENST00000470661 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
PTP4A1-202ENST00000470661 TNP1P09430 55 aa2.31□□□□□ -2.04
PTP4A1-202ENST00000470661 MT4P47944 62 aa2.31□□□□□ -2.04
PTP4A1-202ENST00000470661 PRR15LQ9BU68 103 aa2.3□□□□□ -2.04
PTP4A1-202ENST00000470661 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
PTP4A1-202ENST00000470661 ATP5EP56381 51 aaPredicted RBP2.28□□□□□ -2.04
PTP4A1-202ENST00000470661 TMEM258P61165 79 aa2.26□□□□□ -2.05
PTP4A1-202ENST00000470661 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
PTP4A1-202ENST00000470661 UQCR11O14957 56 aa2.24□□□□□ -2.05
PTP4A1-202ENST00000470661 MIR22HGQ0VDD5 57 aa2.24□□□□□ -2.05
PTP4A1-202ENST00000470661 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
PTP4A1-202ENST00000470661 LUZP6Q538Z0 58 aa2.18□□□□□ -2.06
PTP4A1-202ENST00000470661 Q1T7F1 81 aa2.15□□□□□ -2.07
PTP4A1-202ENST00000470661 KRTAP25-1Q3LHN0 102 aa2.15□□□□□ -2.07
PTP4A1-202ENST00000470661 SYNE1Q8NF91 8797 aaKnown RBP2.14□□□□□ -2.07
PTP4A1-202ENST00000470661 A6NED7 52 aa2.12□□□□□ -2.07
PTP4A1-202ENST00000470661 K7ERS5 55 aa2.12□□□□□ -2.07
PTP4A1-202ENST00000470661 PMAIP1Q13794 54 aa2.11□□□□□ -2.07
PTP4A1-202ENST00000470661 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
PTP4A1-202ENST00000470661 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
PTP4A1-202ENST00000470661 ROMO1P60602 79 aa2.04□□□□□ -2.08
PTP4A1-202ENST00000470661 CDC42SE1Q9NRR8 79 aa2.04□□□□□ -2.08
PTP4A1-202ENST00000470661 KRTAP6-1Q3LI64 71 aa2.03□□□□□ -2.08
PTP4A1-202ENST00000470661 RPS28P62857 69 aaKnown RBP1.99□□□□□ -2.09
PTP4A1-202ENST00000470661 MT1AP04731 61 aa1.98□□□□□ -2.09
PTP4A1-202ENST00000470661 KRTAP6-2Q3LI66 62 aa1.94□□□□□ -2.1
PTP4A1-202ENST00000470661 KTN1-AS1Q86SY8 53 aa1.88□□□□□ -2.11
PTP4A1-202ENST00000470661 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
PTP4A1-202ENST00000470661 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
PTP4A1-202ENST00000470661 BRK1Q8WUW1 75 aa1.81□□□□□ -2.12
PTP4A1-202ENST00000470661 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
PTP4A1-202ENST00000470661 INE1O15225 51 aa1.46□□□□□ -2.18
PTP4A1-202ENST00000470661 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
PTP4A1-202ENST00000470661 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
PTP4A1-202ENST00000470661 PRM1P04553 51 aa1.09□□□□□ -2.23
PTP4A1-202ENST00000470661 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 57.5 ms