RNA–Protein interactions for RNA: ENST00000470589.1

GABRR3-201, Transcript of gamma-aminobutyric acid type A receptor rho3 subunit (gene/pseudogene), humanhuman

TSL 1 (best)

Gene GABRR3, Length 4,826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR3-201ENST00000470589 KRTAP19-2Q3LHN2 52 aa1.35□□□□□ -2.19
GABRR3-201ENST00000470589 LYSTQ99698 3801 aa1.33□□□□□ -2.2
GABRR3-201ENST00000470589 SPRR2EP22531 72 aa1.33□□□□□ -2.2
GABRR3-201ENST00000470589 SPRR2BP35325 72 aa1.33□□□□□ -2.2
GABRR3-201ENST00000470589 SPRR2AP35326 72 aa1.33□□□□□ -2.2
GABRR3-201ENST00000470589 KRTAP5-4Q6L8H1 288 aa1.33□□□□□ -2.2
GABRR3-201ENST00000470589 LCE3DQ9BYE3 92 aa1.33□□□□□ -2.2
GABRR3-201ENST00000470589 KRTAP19-3Q7Z4W3 81 aa1.32□□□□□ -2.2
GABRR3-201ENST00000470589 LCE3EQ5T5B0 92 aa1.32□□□□□ -2.2
GABRR3-201ENST00000470589 KIAA1109Q2LD37 5005 aa1.32□□□□□ -2.2
GABRR3-201ENST00000470589 MT1EP04732 61 aa1.32□□□□□ -2.2
GABRR3-201ENST00000470589 LCE1FQ5T754 118 aa1.31□□□□□ -2.2
GABRR3-201ENST00000470589 FLGP20930 4061 aaPredicted RBP1.31□□□□□ -2.2
GABRR3-201ENST00000470589 TNXBP22105 4242 aa1.29□□□□□ -2.2
GABRR3-201ENST00000470589 BIRC6Q9NR09 4857 aa1.29□□□□□ -2.2
GABRR3-201ENST00000470589 SPRR2DP22532 72 aa1.29□□□□□ -2.2
GABRR3-201ENST00000470589 MUC17Q685J3 4493 aa1.29□□□□□ -2.2
GABRR3-201ENST00000470589 MUC5BQ9HC84 5762 aaPredicted RBP1.28□□□□□ -2.2
GABRR3-201ENST00000470589 KRTAP19-6Q3LI70 58 aa1.27□□□□□ -2.21
GABRR3-201ENST00000470589 HERC2O95714 4834 aa1.26□□□□□ -2.21
GABRR3-201ENST00000470589 KRTAP6-3Q3LI67 103 aa1.26□□□□□ -2.21
GABRR3-201ENST00000470589 MT1MQ8N339 61 aa1.26□□□□□ -2.21
GABRR3-201ENST00000470589 LRP2P98164 4655 aa1.25□□□□□ -2.21
GABRR3-201ENST00000470589 KRTAP2-3P0C7H8 128 aa1.24□□□□□ -2.21
GABRR3-201ENST00000470589 KRTAP2-4Q9BYR9 128 aa1.24□□□□□ -2.21
GABRR3-201ENST00000470589 KRTAP2-1Q9BYU5 128 aa1.24□□□□□ -2.21
GABRR3-201ENST00000470589 HYDINQ4G0P3 5121 aa1.24□□□□□ -2.21
GABRR3-201ENST00000470589 HMCN1Q96RW7 5635 aa1.23□□□□□ -2.21
GABRR3-201ENST00000470589 MUC2Q02817 5179 aa1.22□□□□□ -2.21
GABRR3-201ENST00000470589 KMT2CQ8NEZ4 4911 aaKnown RBP1.21□□□□□ -2.22
GABRR3-201ENST00000470589 KRTAP19-7Q3SYF9 63 aa1.21□□□□□ -2.22
GABRR3-201ENST00000470589 OBSCNQ5VST9 7968 aa1.21□□□□□ -2.22
GABRR3-201ENST00000470589 MT1AP04731 61 aa1.21□□□□□ -2.22
GABRR3-201ENST00000470589 LCE1EQ5T753 118 aa1.21□□□□□ -2.22
GABRR3-201ENST00000470589 PRM1P04553 51 aa1.17□□□□□ -2.22
GABRR3-201ENST00000470589 LPAP08519 4548 aa1.15□□□□□ -2.22
GABRR3-201ENST00000470589 ABCA13Q86UQ4 5058 aa1.15□□□□□ -2.23
GABRR3-201ENST00000470589 KRTAP5-8O75690 187 aa1.15□□□□□ -2.23
GABRR3-201ENST00000470589 KRTAP5-5Q701N2 237 aaPredicted RBP1.15□□□□□ -2.23
GABRR3-201ENST00000470589 RNF213Q63HN8 5207 aa1.14□□□□□ -2.23
GABRR3-201ENST00000470589 EPPK1P58107 5090 aaKnown RBP1.13□□□□□ -2.23
GABRR3-201ENST00000470589 HMCN2Q8NDA2 5059 aa1.12□□□□□ -2.23
GABRR3-201ENST00000470589 KRTAP4-4Q9BYR3 166 aa1.1□□□□□ -2.23
GABRR3-201ENST00000470589 KRTAP4-3Q9BYR4 195 aa1.1□□□□□ -2.23
GABRR3-201ENST00000470589 FAT4Q6V0I7 4981 aa1.1□□□□□ -2.23
GABRR3-201ENST00000470589 KRTAP9-6A8MVA2 160 aa1.09□□□□□ -2.24
GABRR3-201ENST00000470589 AHNAKQ09666 5890 aaKnown RBP1.07□□□□□ -2.24
GABRR3-201ENST00000470589 MT4P47944 62 aa1.07□□□□□ -2.24
GABRR3-201ENST00000470589 KRTAP6-1Q3LI64 71 aa1.06□□□□□ -2.24
GABRR3-201ENST00000470589 SSPOA2VEC9 5147 aa1.05□□□□□ -2.24
GABRR3-201ENST00000470589 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
GABRR3-201ENST00000470589 LCE1BQ5T7P3 118 aa1.05□□□□□ -2.24
GABRR3-201ENST00000470589 UBR4Q5T4S7 5183 aa1.04□□□□□ -2.24
GABRR3-201ENST00000470589 KRTAP20-1Q3LI63 56 aa1.01□□□□□ -2.25
GABRR3-201ENST00000470589 KRTAP5-11Q6L8G4 156 aa1.01□□□□□ -2.25
GABRR3-201ENST00000470589 KRTAP5-1Q6L8H4 278 aa1.01□□□□□ -2.25
GABRR3-201ENST00000470589 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
GABRR3-201ENST00000470589 MACF1Q9UPN3 7388 aaKnown RBP0.98□□□□□ -2.25
GABRR3-201ENST00000470589 FSIP2Q5CZC0 6907 aa0.94□□□□□ -2.26
GABRR3-201ENST00000470589 SYNE2Q8WXH0 6885 aaKnown RBP0.94□□□□□ -2.26
GABRR3-201ENST00000470589 AHNAK2Q8IVF2 5795 aa0.94□□□□□ -2.26
GABRR3-201ENST00000470589 USH2AO75445 5202 aa0.93□□□□□ -2.26
GABRR3-201ENST00000470589 KRTAP5-7Q6L8G8 165 aa0.89□□□□□ -2.27
GABRR3-201ENST00000470589 KRTAP20-2Q3LI61 65 aa0.88□□□□□ -2.27
GABRR3-201ENST00000470589 LCE1CQ5T751 118 aa0.87□□□□□ -2.27
GABRR3-201ENST00000470589 NEBP20929 6669 aa0.86□□□□□ -2.27
GABRR3-201ENST00000470589 KMT2DO14686 5537 aa0.84□□□□□ -2.27
GABRR3-201ENST00000470589 DSTQ03001 7570 aaKnown RBP0.84□□□□□ -2.28
GABRR3-201ENST00000470589 MUC12Q9UKN1 5478 aa0.83□□□□□ -2.28
GABRR3-201ENST00000470589 FCGBPQ9Y6R7 5405 aaPredicted RBP0.83□□□□□ -2.28
GABRR3-201ENST00000470589 MDN1Q9NU22 5596 aa0.8□□□□□ -2.28
GABRR3-201ENST00000470589 MUC19Q7Z5P9 8384 aa0.8□□□□□ -2.28
GABRR3-201ENST00000470589 MUC5ACP98088 5654 aa0.79□□□□□ -2.28
GABRR3-201ENST00000470589 KRTAP5-10Q6L8G5 202 aa0.78□□□□□ -2.28
GABRR3-201ENST00000470589 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
GABRR3-201ENST00000470589 KRTAP21-2Q3LI59 83 aa0.58□□□□□ -2.32
GABRR3-201ENST00000470589 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
GABRR3-201ENST00000470589 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 66.4 ms