RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 LPAP08519 4548 aa2.3□□□□□ -2.04
CD46-212ENST00000469535 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
CD46-212ENST00000469535 HECTD4Q9Y4D8 3996 aa2.28□□□□□ -2.04
CD46-212ENST00000469535 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
CD46-212ENST00000469535 LCE1DQ5T752 114 aa2.25□□□□□ -2.05
CD46-212ENST00000469535 MT1LQ93083 61 aa2.25□□□□□ -2.05
CD46-212ENST00000469535 MT1EP04732 61 aa2.24□□□□□ -2.05
CD46-212ENST00000469535 KRTAP19-6Q3LI70 58 aa2.24□□□□□ -2.05
CD46-212ENST00000469535 KRTAP20-1Q3LI63 56 aa2.24□□□□□ -2.05
CD46-212ENST00000469535 LOC100996750A0A140TA64 210 aa2.21□□□□□ -2.06
CD46-212ENST00000469535 MT1MQ8N339 61 aa2.21□□□□□ -2.06
CD46-212ENST00000469535 KRTAP4-3Q9BYR4 195 aa2.19□□□□□ -2.06
CD46-212ENST00000469535 KRTAP9-7A8MTY7 169 aa2.17□□□□□ -2.06
CD46-212ENST00000469535 TNXBP22105 4242 aa2.17□□□□□ -2.06
CD46-212ENST00000469535 LCE5AQ5TCM9 118 aa2.17□□□□□ -2.06
CD46-212ENST00000469535 USH2AO75445 5202 aa2.16□□□□□ -2.06
CD46-212ENST00000469535 PRM1P04553 51 aa2.12□□□□□ -2.07
CD46-212ENST00000469535 KRTAP4-9Q9BYQ8 210 aa2.08□□□□□ -2.08
CD46-212ENST00000469535 KRTAP6-3Q3LI67 103 aa2.08□□□□□ -2.08
CD46-212ENST00000469535 KRTAP2-3P0C7H8 128 aa2.07□□□□□ -2.08
CD46-212ENST00000469535 KRTAP2-4Q9BYR9 128 aa2.07□□□□□ -2.08
CD46-212ENST00000469535 FLGP20930 4061 aaPredicted RBP2.07□□□□□ -2.08
CD46-212ENST00000469535 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.03□□□□□ -2.08
CD46-212ENST00000469535 MT1AP04731 61 aa2.02□□□□□ -2.09
CD46-212ENST00000469535 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
CD46-212ENST00000469535 LCE1EQ5T753 118 aa2.02□□□□□ -2.09
CD46-212ENST00000469535 LCE1FQ5T754 118 aa2.02□□□□□ -2.09
CD46-212ENST00000469535 LCE1AQ5T7P2 110 aa2.02□□□□□ -2.09
CD46-212ENST00000469535 SYNE2Q8WXH0 6885 aaKnown RBP2.02□□□□□ -2.09
CD46-212ENST00000469535 FSIP2Q5CZC0 6907 aa2.01□□□□□ -2.09
CD46-212ENST00000469535 NEBP20929 6669 aa1.99□□□□□ -2.09
CD46-212ENST00000469535 SSPOA2VEC9 5147 aa1.99□□□□□ -2.09
CD46-212ENST00000469535 MUC2Q02817 5179 aa1.98□□□□□ -2.09
CD46-212ENST00000469535 KRTAP2-2Q9BYT5 123 aa1.98□□□□□ -2.09
CD46-212ENST00000469535 KRTAP2-1Q9BYU5 128 aa1.98□□□□□ -2.09
CD46-212ENST00000469535 KRTAP19-7Q3SYF9 63 aa1.97□□□□□ -2.09
CD46-212ENST00000469535 KRTAP6-2Q3LI66 62 aa1.96□□□□□ -2.1
CD46-212ENST00000469535 LCE4AQ5TA78 99 aa1.96□□□□□ -2.1
CD46-212ENST00000469535 SYNE1Q8NF91 8797 aaKnown RBP1.93□□□□□ -2.1
CD46-212ENST00000469535 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
CD46-212ENST00000469535 KRTAP9-4Q9BYQ2 154 aa1.9□□□□□ -2.11
CD46-212ENST00000469535 KRTAP5-9P26371 169 aa1.85□□□□□ -2.11
CD46-212ENST00000469535 KRTAP9-9Q9BYP9 154 aa1.84□□□□□ -2.12
CD46-212ENST00000469535 FCGBPQ9Y6R7 5405 aaPredicted RBP1.82□□□□□ -2.12
CD46-212ENST00000469535 MDN1Q9NU22 5596 aa1.81□□□□□ -2.12
CD46-212ENST00000469535 OBSCNQ5VST9 7968 aa1.77□□□□□ -2.13
CD46-212ENST00000469535 KRTAP9-6A8MVA2 160 aa1.74□□□□□ -2.13
CD46-212ENST00000469535 GPR98Q8WXG9 6306 aa1.74□□□□□ -2.13
CD46-212ENST00000469535 KMT2DO14686 5537 aa1.72□□□□□ -2.13
CD46-212ENST00000469535 MACF1Q9UPN3 7388 aaKnown RBP1.7□□□□□ -2.14
CD46-212ENST00000469535 KRTAP4-6Q9BYQ5 205 aa1.66□□□□□ -2.14
CD46-212ENST00000469535 MUC12Q9UKN1 5478 aa1.66□□□□□ -2.14
CD46-212ENST00000469535 KRTAP20-2Q3LI61 65 aa1.63□□□□□ -2.15
CD46-212ENST00000469535 MUC5BQ9HC84 5762 aaPredicted RBP1.61□□□□□ -2.15
CD46-212ENST00000469535 KRTAP4-12Q9BQ66 201 aa1.6□□□□□ -2.15
CD46-212ENST00000469535 KRTAP4-2Q9BYR5 136 aa1.6□□□□□ -2.15
CD46-212ENST00000469535 AHNAK2Q8IVF2 5795 aa1.6□□□□□ -2.15
CD46-212ENST00000469535 DSTQ03001 7570 aaKnown RBP1.59□□□□□ -2.16
CD46-212ENST00000469535 KRTAP4-11Q9BYQ6 195 aa1.59□□□□□ -2.16
CD46-212ENST00000469535 KRTAP4-4Q9BYR3 166 aa1.58□□□□□ -2.16
CD46-212ENST00000469535 HMCN1Q96RW7 5635 aa1.57□□□□□ -2.16
CD46-212ENST00000469535 KRTAP5-4Q6L8H1 288 aa1.54□□□□□ -2.16
CD46-212ENST00000469535 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
CD46-212ENST00000469535 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
CD46-212ENST00000469535 KRTAP5-5Q701N2 237 aaPredicted RBP1.46□□□□□ -2.18
CD46-212ENST00000469535 KRTAP5-3Q6L8H2 238 aa1.35□□□□□ -2.19
CD46-212ENST00000469535 KRTAP5-2Q701N4 177 aa1.29□□□□□ -2.2
CD46-212ENST00000469535 MUC5ACP98088 5654 aa1.27□□□□□ -2.21
CD46-212ENST00000469535 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
CD46-212ENST00000469535 KRTAP5-8O75690 187 aa1.23□□□□□ -2.21
CD46-212ENST00000469535 KRTAP5-7Q6L8G8 165 aa1.17□□□□□ -2.22
CD46-212ENST00000469535 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
CD46-212ENST00000469535 KRTAP5-1Q6L8H4 278 aa1.1□□□□□ -2.23
CD46-212ENST00000469535 KRTAP5-11Q6L8G4 156 aa1.07□□□□□ -2.24
CD46-212ENST00000469535 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.03□□□□□ -2.24
CD46-212ENST00000469535 KRTAP21-2Q3LI59 83 aa0.94□□□□□ -2.26
CD46-212ENST00000469535 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
CD46-212ENST00000469535 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 49.7 ms