RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 MT1LQ93083 61 aa3.46□□□□□ -1.86
TRAPPC10-207ENST00000468864 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
TRAPPC10-207ENST00000468864 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
TRAPPC10-207ENST00000468864 MT1EP04732 61 aa3.41□□□□□ -1.86
TRAPPC10-207ENST00000468864 KMT2DO14686 5537 aa3.39□□□□□ -1.87
TRAPPC10-207ENST00000468864 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
TRAPPC10-207ENST00000468864 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
TRAPPC10-207ENST00000468864 USH2AO75445 5202 aa3.38□□□□□ -1.87
TRAPPC10-207ENST00000468864 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
TRAPPC10-207ENST00000468864 KRTAP19-7Q3SYF9 63 aa3.35□□□□□ -1.87
TRAPPC10-207ENST00000468864 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
TRAPPC10-207ENST00000468864 KRTAP19-3Q7Z4W3 81 aa3.32□□□□□ -1.88
TRAPPC10-207ENST00000468864 KRTAP4-9Q9BYQ8 210 aa3.28□□□□□ -1.88
TRAPPC10-207ENST00000468864 KRTAP2-3P0C7H8 128 aa3.28□□□□□ -1.88
TRAPPC10-207ENST00000468864 KRTAP2-4Q9BYR9 128 aa3.28□□□□□ -1.88
TRAPPC10-207ENST00000468864 KRTAP2-1Q9BYU5 128 aa3.28□□□□□ -1.88
TRAPPC10-207ENST00000468864 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
TRAPPC10-207ENST00000468864 MT1MQ8N339 61 aa3.25□□□□□ -1.89
TRAPPC10-207ENST00000468864 PRM1P04553 51 aa3.24□□□□□ -1.89
TRAPPC10-207ENST00000468864 SPRR2EP22531 72 aa3.24□□□□□ -1.89
TRAPPC10-207ENST00000468864 SPRR2BP35325 72 aa3.24□□□□□ -1.89
TRAPPC10-207ENST00000468864 SPRR2AP35326 72 aa3.24□□□□□ -1.89
TRAPPC10-207ENST00000468864 SSPOA2VEC9 5147 aa3.22□□□□□ -1.89
TRAPPC10-207ENST00000468864 KRTAP19-6Q3LI70 58 aa3.14□□□□□ -1.91
TRAPPC10-207ENST00000468864 MUC12Q9UKN1 5478 aa3.11□□□□□ -1.91
TRAPPC10-207ENST00000468864 SPRR2DP22532 72 aa3.09□□□□□ -1.92
TRAPPC10-207ENST00000468864 KRTAP9-7A8MTY7 169 aa2.99□□□□□ -1.93
TRAPPC10-207ENST00000468864 MT3P25713 68 aa2.98□□□□□ -1.93
TRAPPC10-207ENST00000468864 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
TRAPPC10-207ENST00000468864 MT1AP04731 61 aa2.96□□□□□ -1.94
TRAPPC10-207ENST00000468864 KRTAP9-2Q9BYQ4 174 aa2.96□□□□□ -1.94
TRAPPC10-207ENST00000468864 MACF1Q9UPN3 7388 aaKnown RBP2.96□□□□□ -1.94
TRAPPC10-207ENST00000468864 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
TRAPPC10-207ENST00000468864 LCE1AQ5T7P2 110 aa2.91□□□□□ -1.94
TRAPPC10-207ENST00000468864 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.94
TRAPPC10-207ENST00000468864 MT4P47944 62 aa2.88□□□□□ -1.95
TRAPPC10-207ENST00000468864 LCE5AQ5TCM9 118 aa2.86□□□□□ -1.95
TRAPPC10-207ENST00000468864 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
TRAPPC10-207ENST00000468864 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
TRAPPC10-207ENST00000468864 LCE1DQ5T752 114 aa2.84□□□□□ -1.95
TRAPPC10-207ENST00000468864 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
TRAPPC10-207ENST00000468864 KRTAP9-6A0A140TA67 174 aa2.81□□□□□ -1.96
TRAPPC10-207ENST00000468864 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.81□□□□□ -1.96
TRAPPC10-207ENST00000468864 KRTAP6-3Q3LI67 103 aa2.8□□□□□ -1.96
TRAPPC10-207ENST00000468864 KRTAP2-2Q9BYT5 123 aa2.77□□□□□ -1.97
TRAPPC10-207ENST00000468864 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
TRAPPC10-207ENST00000468864 KRTAP9-4Q9BYQ2 154 aa2.72□□□□□ -1.97
TRAPPC10-207ENST00000468864 MDN1Q9NU22 5596 aa2.7□□□□□ -1.98
TRAPPC10-207ENST00000468864 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
TRAPPC10-207ENST00000468864 LCE4AQ5TA78 99 aa2.68□□□□□ -1.98
TRAPPC10-207ENST00000468864 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
TRAPPC10-207ENST00000468864 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
TRAPPC10-207ENST00000468864 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
TRAPPC10-207ENST00000468864 LCE1FQ5T754 118 aa2.47□□□□□ -2.01
TRAPPC10-207ENST00000468864 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
TRAPPC10-207ENST00000468864 NEBP20929 6669 aa2.46□□□□□ -2.02
TRAPPC10-207ENST00000468864 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
TRAPPC10-207ENST00000468864 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
TRAPPC10-207ENST00000468864 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
TRAPPC10-207ENST00000468864 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
TRAPPC10-207ENST00000468864 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
TRAPPC10-207ENST00000468864 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
TRAPPC10-207ENST00000468864 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
TRAPPC10-207ENST00000468864 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
TRAPPC10-207ENST00000468864 KRTAP20-1Q3LI63 56 aa2.19□□□□□ -2.06
TRAPPC10-207ENST00000468864 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC10-207ENST00000468864 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
TRAPPC10-207ENST00000468864 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
TRAPPC10-207ENST00000468864 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
TRAPPC10-207ENST00000468864 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.11
TRAPPC10-207ENST00000468864 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
TRAPPC10-207ENST00000468864 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
TRAPPC10-207ENST00000468864 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC10-207ENST00000468864 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
TRAPPC10-207ENST00000468864 KRTAP5-11Q6L8G4 156 aa1.61□□□□□ -2.15
TRAPPC10-207ENST00000468864 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
TRAPPC10-207ENST00000468864 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
TRAPPC10-207ENST00000468864 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 85.2 ms