RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 KRTAP13-4Q3LI77 160 aa2.12□□□□□ -2.07
CD46-211ENST00000464082 SNURFQ9Y675 71 aa2.12□□□□□ -2.07
CD46-211ENST00000464082 K7ERU9 68 aa2.11□□□□□ -2.07
CD46-211ENST00000464082 LINC01554Q52M75 96 aa2.11□□□□□ -2.07
CD46-211ENST00000464082 KRTAP2-3P0C7H8 128 aa2.1□□□□□ -2.07
CD46-211ENST00000464082 SMIM20Q8N5G0 67 aa2.1□□□□□ -2.07
CD46-211ENST00000464082 KRTAP2-4Q9BYR9 128 aa2.1□□□□□ -2.07
CD46-211ENST00000464082 V9GYY9 64 aa2.1□□□□□ -2.07
CD46-211ENST00000464082 SPANXA2-OT1Q8N9U9 137 aa2.09□□□□□ -2.07
CD46-211ENST00000464082 SMIM26A0A096LP01 95 aa2.08□□□□□ -2.08
CD46-211ENST00000464082 PSPHP1O15172 72 aa2.07□□□□□ -2.08
CD46-211ENST00000464082 SERP2Q8N6R1 65 aa2.06□□□□□ -2.08
CD46-211ENST00000464082 CHKB-CPT1BH3BT56 60 aa2.05□□□□□ -2.08
CD46-211ENST00000464082 SPTSSBQ8NFR3 76 aa2.05□□□□□ -2.08
CD46-211ENST00000464082 CYSTM1Q9H1C7 97 aa2.05□□□□□ -2.08
CD46-211ENST00000464082 SPRR2DP22532 72 aa2.04□□□□□ -2.08
CD46-211ENST00000464082 KRTAP2-1Q9BYU5 128 aa2.04□□□□□ -2.08
CD46-211ENST00000464082 KRTAP19-7Q3SYF9 63 aa2.03□□□□□ -2.08
CD46-211ENST00000464082 COA5Q86WW8 74 aa2.03□□□□□ -2.08
CD46-211ENST00000464082 H7BZZ5 65 aa2.01□□□□□ -2.09
CD46-211ENST00000464082 PRO0628Q9UI54 55 aa2.01□□□□□ -2.09
CD46-211ENST00000464082 COX7CP15954 63 aa2□□□□□ -2.09
CD46-211ENST00000464082 MT1EP04732 61 aa1.98□□□□□ -2.09
CD46-211ENST00000464082 KRTAP12-1P59990 96 aa1.98□□□□□ -2.09
CD46-211ENST00000464082 SPATA8Q6RVD6 105 aa1.98□□□□□ -2.09
CD46-211ENST00000464082 A0A0D9SG42 100 aa1.96□□□□□ -2.1
CD46-211ENST00000464082 KRTAP19-3Q7Z4W3 81 aa1.96□□□□□ -2.1
CD46-211ENST00000464082 A0A1B0GU33 70 aa1.95□□□□□ -2.1
CD46-211ENST00000464082 LUZP6Q538Z0 58 aa1.95□□□□□ -2.1
CD46-211ENST00000464082 KRTAP19-5Q3LI72 72 aa1.93□□□□□ -2.1
CD46-211ENST00000464082 SERP1Q9Y6X1 66 aa1.93□□□□□ -2.1
CD46-211ENST00000464082 SPINT4Q6UDR6 99 aa1.92□□□□□ -2.1
CD46-211ENST00000464082 ANAPC13Q9BS18 74 aa1.91□□□□□ -2.1
CD46-211ENST00000464082 CCDC179H3BU77 68 aa1.9□□□□□ -2.11
CD46-211ENST00000464082 C10orf95Q9H7T3 257 aa1.9□□□□□ -2.11
CD46-211ENST00000464082 DSTQ03001 7570 aaKnown RBP1.9□□□□□ -2.11
CD46-211ENST00000464082 MT1GP13640 62 aa1.89□□□□□ -2.11
CD46-211ENST00000464082 MT1MQ8N339 61 aa1.89□□□□□ -2.11
CD46-211ENST00000464082 MT1LQ93083 61 aa1.89□□□□□ -2.11
CD46-211ENST00000464082 A0A1B0GU69 56 aa1.88□□□□□ -2.11
CD46-211ENST00000464082 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
CD46-211ENST00000464082 K7ERS5 55 aa1.87□□□□□ -2.11
CD46-211ENST00000464082 LINC01558Q9Y6Z2 57 aa1.85□□□□□ -2.11
CD46-211ENST00000464082 ATP5EP56381 51 aaPredicted RBP1.83□□□□□ -2.12
CD46-211ENST00000464082 TNP1P09430 55 aa1.82□□□□□ -2.12
CD46-211ENST00000464082 SPRR5A0A1B0GTR4 108 aa1.8□□□□□ -2.12
CD46-211ENST00000464082 MT4P47944 62 aa1.8□□□□□ -2.12
CD46-211ENST00000464082 TMEM258P61165 79 aa1.8□□□□□ -2.12
CD46-211ENST00000464082 KRTAP12-3P60328 96 aa1.79□□□□□ -2.12
CD46-211ENST00000464082 PRR15LQ9BU68 103 aa1.78□□□□□ -2.12
CD46-211ENST00000464082 A6NED7 52 aa1.77□□□□□ -2.13
CD46-211ENST00000464082 UQCR11O14957 56 aa1.76□□□□□ -2.13
CD46-211ENST00000464082 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
CD46-211ENST00000464082 MIR22HGQ0VDD5 57 aa1.73□□□□□ -2.13
CD46-211ENST00000464082 KRTAP25-1Q3LHN0 102 aa1.72□□□□□ -2.13
CD46-211ENST00000464082 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
CD46-211ENST00000464082 KRTAP20-2Q3LI61 65 aa1.71□□□□□ -2.14
CD46-211ENST00000464082 Q1T7F1 81 aa1.7□□□□□ -2.14
CD46-211ENST00000464082 GPR98Q8WXG9 6306 aa1.69□□□□□ -2.14
CD46-211ENST00000464082 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
CD46-211ENST00000464082 PMAIP1Q13794 54 aa1.64□□□□□ -2.15
CD46-211ENST00000464082 SYNE1Q8NF91 8797 aaKnown RBP1.63□□□□□ -2.15
CD46-211ENST00000464082 KRTAP6-1Q3LI64 71 aa1.61□□□□□ -2.15
CD46-211ENST00000464082 MT1AP04731 61 aa1.6□□□□□ -2.15
CD46-211ENST00000464082 ROMO1P60602 79 aa1.58□□□□□ -2.16
CD46-211ENST00000464082 RPS28P62857 69 aaKnown RBP1.58□□□□□ -2.16
CD46-211ENST00000464082 CDC42SE1Q9NRR8 79 aa1.58□□□□□ -2.16
CD46-211ENST00000464082 KRTAP6-2Q3LI66 62 aa1.52□□□□□ -2.17
CD46-211ENST00000464082 KTN1-AS1Q86SY8 53 aa1.51□□□□□ -2.17
CD46-211ENST00000464082 BRK1Q8WUW1 75 aa1.48□□□□□ -2.17
CD46-211ENST00000464082 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
CD46-211ENST00000464082 MUC5ACP98088 5654 aa1.37□□□□□ -2.19
CD46-211ENST00000464082 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
CD46-211ENST00000464082 INE1O15225 51 aa1.14□□□□□ -2.23
CD46-211ENST00000464082 PHGR1C9JFL3 82 aa0.99□□□□□ -2.25
CD46-211ENST00000464082 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
CD46-211ENST00000464082 PRM1P04553 51 aa0.82□□□□□ -2.28
CD46-211ENST00000464082 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms