RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 ADM2Q7Z4H4 148 aa1.8□□□□□ -2.12
CNN3-204ENST00000461018 SMIM20Q8N5G0 67 aa1.8□□□□□ -2.12
CNN3-204ENST00000461018 PRO2289Q9P1D8 64 aa1.8□□□□□ -2.12
CNN3-204ENST00000461018 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
CNN3-204ENST00000461018 PLAC4Q8WY50 150 aa1.78□□□□□ -2.12
CNN3-204ENST00000461018 R4GN34 69 aa1.78□□□□□ -2.12
CNN3-204ENST00000461018 K7ERU9 68 aa1.77□□□□□ -2.13
CNN3-204ENST00000461018 ACYP2P14621 99 aa1.77□□□□□ -2.13
CNN3-204ENST00000461018 SPTSSBQ8NFR3 76 aa1.77□□□□□ -2.13
CNN3-204ENST00000461018 P0C880 135 aa1.76□□□□□ -2.13
CNN3-204ENST00000461018 MT1XP80297 61 aa1.76□□□□□ -2.13
CNN3-204ENST00000461018 MUC5ACP98088 5654 aa1.76□□□□□ -2.13
CNN3-204ENST00000461018 M0QZ58 72 aa1.75□□□□□ -2.13
CNN3-204ENST00000461018 SPANXA2-OT1Q8N9U9 137 aa1.74□□□□□ -2.13
CNN3-204ENST00000461018 MT-ATP8P03928 68 aa1.73□□□□□ -2.13
CNN3-204ENST00000461018 CHKB-CPT1BH3BT56 60 aa1.71□□□□□ -2.14
CNN3-204ENST00000461018 LINC01554Q52M75 96 aa1.7□□□□□ -2.14
CNN3-204ENST00000461018 SERP2Q8N6R1 65 aa1.7□□□□□ -2.14
CNN3-204ENST00000461018 SNURFQ9Y675 71 aa1.68□□□□□ -2.14
CNN3-204ENST00000461018 SEC61GP60059 68 aa1.65□□□□□ -2.15
CNN3-204ENST00000461018 COX7CP15954 63 aa1.64□□□□□ -2.15
CNN3-204ENST00000461018 COA5Q86WW8 74 aa1.64□□□□□ -2.15
CNN3-204ENST00000461018 SERP1Q9Y6X1 66 aa1.64□□□□□ -2.15
CNN3-204ENST00000461018 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
CNN3-204ENST00000461018 KRTAP20-2Q3LI61 65 aa1.63□□□□□ -2.15
CNN3-204ENST00000461018 KRTAP13-4Q3LI77 160 aa1.63□□□□□ -2.15
CNN3-204ENST00000461018 CAMK2N1Q7Z7J9 78 aa1.63□□□□□ -2.15
CNN3-204ENST00000461018 H7BZZ5 65 aa1.62□□□□□ -2.15
CNN3-204ENST00000461018 KRTAP19-3Q7Z4W3 81 aa1.61□□□□□ -2.15
CNN3-204ENST00000461018 CYSTM1Q9H1C7 97 aa1.61□□□□□ -2.15
CNN3-204ENST00000461018 A0A1B0GU33 70 aa1.6□□□□□ -2.15
CNN3-204ENST00000461018 SMIM26A0A096LP01 95 aa1.58□□□□□ -2.16
CNN3-204ENST00000461018 KRTAP19-7Q3SYF9 63 aa1.58□□□□□ -2.16
CNN3-204ENST00000461018 A0A1B0GU69 56 aa1.57□□□□□ -2.16
CNN3-204ENST00000461018 MT1EP04732 61 aa1.57□□□□□ -2.16
CNN3-204ENST00000461018 ATP5EP56381 51 aaPredicted RBP1.57□□□□□ -2.16
CNN3-204ENST00000461018 KRTAP12-1P59990 96 aa1.57□□□□□ -2.16
CNN3-204ENST00000461018 SPATA8Q6RVD6 105 aa1.57□□□□□ -2.16
CNN3-204ENST00000461018 A0A0D9SG42 100 aa1.56□□□□□ -2.16
CNN3-204ENST00000461018 ANAPC13Q9BS18 74 aa1.56□□□□□ -2.16
CNN3-204ENST00000461018 MT1GP13640 62 aa1.55□□□□□ -2.16
CNN3-204ENST00000461018 SPINT4Q6UDR6 99 aa1.55□□□□□ -2.16
CNN3-204ENST00000461018 PRR15LQ9BU68 103 aa1.55□□□□□ -2.16
CNN3-204ENST00000461018 SYNE1Q8NF91 8797 aaKnown RBP1.55□□□□□ -2.16
CNN3-204ENST00000461018 TNP1P09430 55 aa1.53□□□□□ -2.16
CNN3-204ENST00000461018 MT1MQ8N339 61 aa1.53□□□□□ -2.16
CNN3-204ENST00000461018 KRTAP19-5Q3LI72 72 aa1.51□□□□□ -2.17
CNN3-204ENST00000461018 C10orf95Q9H7T3 257 aa1.51□□□□□ -2.17
CNN3-204ENST00000461018 LINC01558Q9Y6Z2 57 aa1.51□□□□□ -2.17
CNN3-204ENST00000461018 CCDC179H3BU77 68 aa1.5□□□□□ -2.17
CNN3-204ENST00000461018 TMEM258P61165 79 aa1.5□□□□□ -2.17
CNN3-204ENST00000461018 UQCR11O14957 56 aa1.49□□□□□ -2.17
CNN3-204ENST00000461018 MT1LQ93083 61 aa1.49□□□□□ -2.17
CNN3-204ENST00000461018 KRTAP25-1Q3LHN0 102 aa1.45□□□□□ -2.18
CNN3-204ENST00000461018 V9GYY9 64 aa1.45□□□□□ -2.18
CNN3-204ENST00000461018 K7ERS5 55 aa1.44□□□□□ -2.18
CNN3-204ENST00000461018 KRTAP12-3P60328 96 aa1.44□□□□□ -2.18
CNN3-204ENST00000461018 KRTAP12-4P60329 112 aa1.43□□□□□ -2.18
CNN3-204ENST00000461018 MIR22HGQ0VDD5 57 aa1.43□□□□□ -2.18
CNN3-204ENST00000461018 Q1T7F1 81 aa1.42□□□□□ -2.18
CNN3-204ENST00000461018 PSPHP1O15172 72 aa1.37□□□□□ -2.19
CNN3-204ENST00000461018 RPS28P62857 69 aaKnown RBP1.35□□□□□ -2.19
CNN3-204ENST00000461018 CDC42SE1Q9NRR8 79 aa1.35□□□□□ -2.19
CNN3-204ENST00000461018 A6NED7 52 aa1.34□□□□□ -2.19
CNN3-204ENST00000461018 ROMO1P60602 79 aa1.32□□□□□ -2.2
CNN3-204ENST00000461018 MT1AP04731 61 aa1.28□□□□□ -2.2
CNN3-204ENST00000461018 KRTAP6-2Q3LI66 62 aa1.27□□□□□ -2.21
CNN3-204ENST00000461018 KRTAP6-1Q3LI64 71 aa1.26□□□□□ -2.21
CNN3-204ENST00000461018 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
CNN3-204ENST00000461018 BRK1Q8WUW1 75 aa1.13□□□□□ -2.23
CNN3-204ENST00000461018 PMAIP1Q13794 54 aa1.08□□□□□ -2.24
CNN3-204ENST00000461018 PRO0628Q9UI54 55 aa1□□□□□ -2.25
CNN3-204ENST00000461018 KTN1-AS1Q86SY8 53 aa0.95□□□□□ -2.26
CNN3-204ENST00000461018 LUZP6Q538Z0 58 aa0.94□□□□□ -2.26
CNN3-204ENST00000461018 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
CNN3-204ENST00000461018 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
CNN3-204ENST00000461018 PRM1P04553 51 aa0.65□□□□□ -2.31
CNN3-204ENST00000461018 INE1O15225 51 aa0.59□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 254 ms