RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 KRTAP19-2Q3LHN2 52 aa2.36□□□□□ -2.03
PCGEM1-201ENST00000454040 KRTAP4-1Q9BYQ7 146 aa2.34□□□□□ -2.03
PCGEM1-201ENST00000454040 MUC17Q685J3 4493 aa2.32□□□□□ -2.04
PCGEM1-201ENST00000454040 C10orf95Q9H7T3 257 aa2.31□□□□□ -2.04
PCGEM1-201ENST00000454040 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
PCGEM1-201ENST00000454040 LPAP08519 4548 aa2.29□□□□□ -2.04
PCGEM1-201ENST00000454040 ABCA13Q86UQ4 5058 aa2.29□□□□□ -2.04
PCGEM1-201ENST00000454040 PCLOQ9Y6V0 5065 aa2.27□□□□□ -2.05
PCGEM1-201ENST00000454040 KRTAP10-10P60014 251 aa2.27□□□□□ -2.05
PCGEM1-201ENST00000454040 FLGP20930 4061 aaPredicted RBP2.26□□□□□ -2.05
PCGEM1-201ENST00000454040 HERC2O95714 4834 aa2.25□□□□□ -2.05
PCGEM1-201ENST00000454040 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
PCGEM1-201ENST00000454040 TNP1P09430 55 aa2.21□□□□□ -2.06
PCGEM1-201ENST00000454040 SPRR2GQ9BYE4 73 aa2.21□□□□□ -2.06
PCGEM1-201ENST00000454040 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
PCGEM1-201ENST00000454040 HERC1Q15751 4861 aa2.17□□□□□ -2.06
PCGEM1-201ENST00000454040 MT1HP80294 61 aa2.14□□□□□ -2.07
PCGEM1-201ENST00000454040 M0R2T5 61 aa2.13□□□□□ -2.07
PCGEM1-201ENST00000454040 KRTAP19-8Q3LI54 63 aa2.13□□□□□ -2.07
PCGEM1-201ENST00000454040 UBR4Q5T4S7 5183 aa2.12□□□□□ -2.07
PCGEM1-201ENST00000454040 MT2AP02795 61 aa2.1□□□□□ -2.07
PCGEM1-201ENST00000454040 HMCN2Q8NDA2 5059 aa2.1□□□□□ -2.07
PCGEM1-201ENST00000454040 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
PCGEM1-201ENST00000454040 MT1FP04733 61 aa2.08□□□□□ -2.08
PCGEM1-201ENST00000454040 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
PCGEM1-201ENST00000454040 KRTAP8-1Q8IUC2 63 aa2.05□□□□□ -2.08
PCGEM1-201ENST00000454040 MUC2Q02817 5179 aa2.04□□□□□ -2.08
PCGEM1-201ENST00000454040 MT1BP07438 61 aa2.04□□□□□ -2.08
PCGEM1-201ENST00000454040 MT1XP80297 61 aa2.02□□□□□ -2.09
PCGEM1-201ENST00000454040 RNF213Q63HN8 5207 aa2□□□□□ -2.09
PCGEM1-201ENST00000454040 KRTAP12-3P60328 96 aa1.98□□□□□ -2.09
PCGEM1-201ENST00000454040 FAT4Q6V0I7 4981 aa1.97□□□□□ -2.09
PCGEM1-201ENST00000454040 KRTAP19-5Q3LI72 72 aa1.86□□□□□ -2.11
PCGEM1-201ENST00000454040 KRTAP19-7Q3SYF9 63 aa1.8□□□□□ -2.12
PCGEM1-201ENST00000454040 KRTAP19-6Q3LI70 58 aa1.79□□□□□ -2.12
PCGEM1-201ENST00000454040 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
PCGEM1-201ENST00000454040 MT1EP04732 61 aa1.75□□□□□ -2.13
PCGEM1-201ENST00000454040 MT1LQ93083 61 aa1.75□□□□□ -2.13
PCGEM1-201ENST00000454040 KRTAP2-3P0C7H8 128 aa1.74□□□□□ -2.13
PCGEM1-201ENST00000454040 KRTAP2-4Q9BYR9 128 aa1.74□□□□□ -2.13
PCGEM1-201ENST00000454040 KRTAP2-1Q9BYU5 128 aa1.74□□□□□ -2.13
PCGEM1-201ENST00000454040 FSIP2Q5CZC0 6907 aa1.72□□□□□ -2.13
PCGEM1-201ENST00000454040 USH2AO75445 5202 aa1.71□□□□□ -2.13
PCGEM1-201ENST00000454040 SSPOA2VEC9 5147 aa1.71□□□□□ -2.14
PCGEM1-201ENST00000454040 MT1GP13640 62 aa1.69□□□□□ -2.14
PCGEM1-201ENST00000454040 KRTAP19-3Q7Z4W3 81 aa1.66□□□□□ -2.14
PCGEM1-201ENST00000454040 MT1MQ8N339 61 aa1.64□□□□□ -2.15
PCGEM1-201ENST00000454040 KMT2DO14686 5537 aa1.63□□□□□ -2.15
PCGEM1-201ENST00000454040 SPRR2FQ96RM1 72 aa1.56□□□□□ -2.16
PCGEM1-201ENST00000454040 FCGBPQ9Y6R7 5405 aaPredicted RBP1.55□□□□□ -2.16
PCGEM1-201ENST00000454040 MT1AP04731 61 aa1.54□□□□□ -2.16
PCGEM1-201ENST00000454040 SYNE2Q8WXH0 6885 aaKnown RBP1.52□□□□□ -2.17
PCGEM1-201ENST00000454040 MACF1Q9UPN3 7388 aaKnown RBP1.52□□□□□ -2.17
PCGEM1-201ENST00000454040 MUC12Q9UKN1 5478 aa1.47□□□□□ -2.17
PCGEM1-201ENST00000454040 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
PCGEM1-201ENST00000454040 NEBP20929 6669 aa1.46□□□□□ -2.18
PCGEM1-201ENST00000454040 SPRR2EP22531 72 aa1.44□□□□□ -2.18
PCGEM1-201ENST00000454040 SPRR2BP35325 72 aa1.44□□□□□ -2.18
PCGEM1-201ENST00000454040 SPRR2AP35326 72 aa1.44□□□□□ -2.18
PCGEM1-201ENST00000454040 KRTAP20-1Q3LI63 56 aa1.44□□□□□ -2.18
PCGEM1-201ENST00000454040 SPRR2DP22532 72 aa1.38□□□□□ -2.19
PCGEM1-201ENST00000454040 PRM1P04553 51 aa1.38□□□□□ -2.19
PCGEM1-201ENST00000454040 GPR98Q8WXG9 6306 aa1.37□□□□□ -2.19
PCGEM1-201ENST00000454040 MDN1Q9NU22 5596 aa1.35□□□□□ -2.19
PCGEM1-201ENST00000454040 DSTQ03001 7570 aaKnown RBP1.32□□□□□ -2.2
PCGEM1-201ENST00000454040 KRTAP6-2Q3LI66 62 aa1.31□□□□□ -2.2
PCGEM1-201ENST00000454040 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
PCGEM1-201ENST00000454040 KRTAP20-2Q3LI61 65 aa1.21□□□□□ -2.22
PCGEM1-201ENST00000454040 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
PCGEM1-201ENST00000454040 MUC5BQ9HC84 5762 aaPredicted RBP1.16□□□□□ -2.22
PCGEM1-201ENST00000454040 MT4P47944 62 aa1.16□□□□□ -2.22
PCGEM1-201ENST00000454040 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
PCGEM1-201ENST00000454040 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
PCGEM1-201ENST00000454040 AHNAKQ09666 5890 aaKnown RBP1.05□□□□□ -2.24
PCGEM1-201ENST00000454040 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
PCGEM1-201ENST00000454040 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
PCGEM1-201ENST00000454040 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms