RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 SMR3BP02814 79 aaPredicted RBP1.27□□□□□ -2.21
HMGB3P8-201ENST00000449709 KRTAP12-3P60328 96 aa1.27□□□□□ -2.21
HMGB3P8-201ENST00000449709 SPRR2GQ9BYE4 73 aa1.27□□□□□ -2.21
HMGB3P8-201ENST00000449709 HYDINQ4G0P3 5121 aa1.25□□□□□ -2.21
HMGB3P8-201ENST00000449709 RYR3Q15413 4870 aa1.25□□□□□ -2.21
HMGB3P8-201ENST00000449709 KRTAP19-5Q3LI72 72 aa1.23□□□□□ -2.21
HMGB3P8-201ENST00000449709 KMT2CQ8NEZ4 4911 aaKnown RBP1.23□□□□□ -2.21
HMGB3P8-201ENST00000449709 MT1HL1P0DM35 61 aa1.2□□□□□ -2.22
HMGB3P8-201ENST00000449709 KRTAP12-4P60329 112 aa1.2□□□□□ -2.22
HMGB3P8-201ENST00000449709 MUC19Q7Z5P9 8384 aa1.2□□□□□ -2.22
HMGB3P8-201ENST00000449709 RYR2Q92736 4967 aa1.19□□□□□ -2.22
HMGB3P8-201ENST00000449709 M0R2T5 61 aa1.19□□□□□ -2.22
HMGB3P8-201ENST00000449709 KRTAP19-8Q3LI54 63 aa1.19□□□□□ -2.22
HMGB3P8-201ENST00000449709 EPPK1P58107 5090 aaKnown RBP1.19□□□□□ -2.22
HMGB3P8-201ENST00000449709 KRTAP5-7Q6L8G8 165 aa1.18□□□□□ -2.22
HMGB3P8-201ENST00000449709 HMCN2Q8NDA2 5059 aa1.18□□□□□ -2.22
HMGB3P8-201ENST00000449709 J3QKU1 62 aa1.17□□□□□ -2.22
HMGB3P8-201ENST00000449709 KRTAP4-1Q9BYQ7 146 aa1.17□□□□□ -2.22
HMGB3P8-201ENST00000449709 HMCN1Q96RW7 5635 aa1.17□□□□□ -2.22
HMGB3P8-201ENST00000449709 RYR1P21817 5038 aa1.16□□□□□ -2.22
HMGB3P8-201ENST00000449709 MT1XP80297 61 aa1.16□□□□□ -2.22
HMGB3P8-201ENST00000449709 BIRC6Q9NR09 4857 aa1.14□□□□□ -2.23
HMGB3P8-201ENST00000449709 MUC2Q02817 5179 aa1.12□□□□□ -2.23
HMGB3P8-201ENST00000449709 ABCA13Q86UQ4 5058 aa1.11□□□□□ -2.23
HMGB3P8-201ENST00000449709 MT1BP07438 61 aa1.11□□□□□ -2.23
HMGB3P8-201ENST00000449709 HERC2O95714 4834 aa1.1□□□□□ -2.23
HMGB3P8-201ENST00000449709 PCLOQ9Y6V0 5065 aa1.1□□□□□ -2.23
HMGB3P8-201ENST00000449709 MT1AP04731 61 aa1.09□□□□□ -2.23
HMGB3P8-201ENST00000449709 UBR4Q5T4S7 5183 aa1.07□□□□□ -2.24
HMGB3P8-201ENST00000449709 MT1EP04732 61 aa1.07□□□□□ -2.24
HMGB3P8-201ENST00000449709 PRM1P04553 51 aa1.06□□□□□ -2.24
HMGB3P8-201ENST00000449709 KRTAP21-3Q3LHN1 58 aa1.05□□□□□ -2.24
HMGB3P8-201ENST00000449709 KRTAP19-7Q3SYF9 63 aa1.05□□□□□ -2.24
HMGB3P8-201ENST00000449709 KIAA1109Q2LD37 5005 aa1.05□□□□□ -2.24
HMGB3P8-201ENST00000449709 KRTAP21-2Q3LI59 83 aa1.04□□□□□ -2.24
HMGB3P8-201ENST00000449709 MT1LQ93083 61 aa1.04□□□□□ -2.24
HMGB3P8-201ENST00000449709 MT2AP02795 61 aa1.03□□□□□ -2.24
HMGB3P8-201ENST00000449709 MT1FP04733 61 aa1.03□□□□□ -2.24
HMGB3P8-201ENST00000449709 SYNE1Q8NF91 8797 aaKnown RBP0.96□□□□□ -2.26
HMGB3P8-201ENST00000449709 SPRR2FQ96RM1 72 aa0.96□□□□□ -2.26
HMGB3P8-201ENST00000449709 RNF213Q63HN8 5207 aa0.95□□□□□ -2.26
HMGB3P8-201ENST00000449709 MT1HP80294 61 aa0.95□□□□□ -2.26
HMGB3P8-201ENST00000449709 KRTAP6-2Q3LI66 62 aa0.95□□□□□ -2.26
HMGB3P8-201ENST00000449709 SPRR2AP35326 72 aa0.92□□□□□ -2.26
HMGB3P8-201ENST00000449709 SPRR2BP35325 72 aa0.91□□□□□ -2.26
HMGB3P8-201ENST00000449709 FAT4Q6V0I7 4981 aa0.91□□□□□ -2.26
HMGB3P8-201ENST00000449709 MT1GP13640 62 aa0.89□□□□□ -2.27
HMGB3P8-201ENST00000449709 MT1MQ8N339 61 aa0.89□□□□□ -2.27
HMGB3P8-201ENST00000449709 CRCT1Q9UGL9 99 aa0.89□□□□□ -2.27
HMGB3P8-201ENST00000449709 SPRR2EP22531 72 aa0.88□□□□□ -2.27
HMGB3P8-201ENST00000449709 SPRR2DP22532 72 aa0.88□□□□□ -2.27
HMGB3P8-201ENST00000449709 USH2AO75445 5202 aa0.87□□□□□ -2.27
HMGB3P8-201ENST00000449709 KRTAP19-3Q7Z4W3 81 aa0.85□□□□□ -2.27
HMGB3P8-201ENST00000449709 KMT2DO14686 5537 aa0.84□□□□□ -2.27
HMGB3P8-201ENST00000449709 KRTAP6-1Q3LI64 71 aa0.84□□□□□ -2.27
HMGB3P8-201ENST00000449709 SSPOA2VEC9 5147 aa0.83□□□□□ -2.28
HMGB3P8-201ENST00000449709 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
HMGB3P8-201ENST00000449709 FCGBPQ9Y6R7 5405 aaPredicted RBP0.79□□□□□ -2.28
HMGB3P8-201ENST00000449709 KRTAP5-10Q6L8G5 202 aa0.75□□□□□ -2.29
HMGB3P8-201ENST00000449709 MDN1Q9NU22 5596 aa0.75□□□□□ -2.29
HMGB3P8-201ENST00000449709 FSIP2Q5CZC0 6907 aa0.73□□□□□ -2.29
HMGB3P8-201ENST00000449709 MUC12Q9UKN1 5478 aa0.73□□□□□ -2.29
HMGB3P8-201ENST00000449709 KRTAP19-6Q3LI70 58 aa0.71□□□□□ -2.3
HMGB3P8-201ENST00000449709 SYNE2Q8WXH0 6885 aaKnown RBP0.7□□□□□ -2.3
HMGB3P8-201ENST00000449709 MUC5ACP98088 5654 aa0.67□□□□□ -2.3
HMGB3P8-201ENST00000449709 NEBP20929 6669 aa0.65□□□□□ -2.31
HMGB3P8-201ENST00000449709 MACF1Q9UPN3 7388 aaKnown RBP0.63□□□□□ -2.31
HMGB3P8-201ENST00000449709 AHNAK2Q8IVF2 5795 aa0.57□□□□□ -2.32
HMGB3P8-201ENST00000449709 GPR98Q8WXG9 6306 aa0.54□□□□□ -2.32
HMGB3P8-201ENST00000449709 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
HMGB3P8-201ENST00000449709 DSTQ03001 7570 aaKnown RBP0.51□□□□□ -2.33
HMGB3P8-201ENST00000449709 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
HMGB3P8-201ENST00000449709 KRTAP20-2Q3LI61 65 aa0.47□□□□□ -2.33
HMGB3P8-201ENST00000449709 KRTAP20-1Q3LI63 56 aa0.45□□□□□ -2.34
HMGB3P8-201ENST00000449709 AHNAKQ09666 5890 aaKnown RBP0.44□□□□□ -2.34
HMGB3P8-201ENST00000449709 MT4P47944 62 aa0.41□□□□□ -2.34
HMGB3P8-201ENST00000449709 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 196.3 ms