RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 LCE2AQ5TA79 106 aaPredicted RBP5.78□□□□□ -1.48
ATG9A-215ENST00000446716 FLGP20930 4061 aaPredicted RBP5.75□□□□□ -1.49
ATG9A-215ENST00000446716 RNF213Q63HN8 5207 aa5.74□□□□□ -1.49
ATG9A-215ENST00000446716 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
ATG9A-215ENST00000446716 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
ATG9A-215ENST00000446716 TNXBP22105 4242 aa5.7□□□□□ -1.5
ATG9A-215ENST00000446716 MT1MQ8N339 61 aa5.7□□□□□ -1.5
ATG9A-215ENST00000446716 LCE3EQ5T5B0 92 aa5.69□□□□□ -1.5
ATG9A-215ENST00000446716 MT4P47944 62 aa5.67□□□□□ -1.5
ATG9A-215ENST00000446716 MT3P25713 68 aa5.56□□□□□ -1.52
ATG9A-215ENST00000446716 MUC2Q02817 5179 aa5.51□□□□□ -1.53
ATG9A-215ENST00000446716 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
ATG9A-215ENST00000446716 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
ATG9A-215ENST00000446716 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.53
ATG9A-215ENST00000446716 KRTAP19-7Q3SYF9 63 aa5.42□□□□□ -1.54
ATG9A-215ENST00000446716 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
ATG9A-215ENST00000446716 SYNE2Q8WXH0 6885 aaKnown RBP5.38□□□□□ -1.55
ATG9A-215ENST00000446716 KRTAP20-1Q3LI63 56 aa5.35□□□□□ -1.55
ATG9A-215ENST00000446716 LCE1BQ5T7P3 118 aa5.31□□□□□ -1.56
ATG9A-215ENST00000446716 LCE1DQ5T752 114 aa5.31□□□□□ -1.56
ATG9A-215ENST00000446716 KRTAP6-3Q3LI67 103 aa5.29□□□□□ -1.56
ATG9A-215ENST00000446716 MT1AP04731 61 aa5.27□□□□□ -1.57
ATG9A-215ENST00000446716 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
ATG9A-215ENST00000446716 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.2□□□□□ -1.58
ATG9A-215ENST00000446716 KRTAP2-3P0C7H8 128 aa5.15□□□□□ -1.58
ATG9A-215ENST00000446716 KRTAP2-4Q9BYR9 128 aa5.15□□□□□ -1.58
ATG9A-215ENST00000446716 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
ATG9A-215ENST00000446716 PRM1P04553 51 aa5.1□□□□□ -1.59
ATG9A-215ENST00000446716 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.59
ATG9A-215ENST00000446716 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
ATG9A-215ENST00000446716 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
ATG9A-215ENST00000446716 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
ATG9A-215ENST00000446716 LCE4AQ5TA78 99 aa4.96□□□□□ -1.61
ATG9A-215ENST00000446716 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
ATG9A-215ENST00000446716 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.63
ATG9A-215ENST00000446716 USH2AO75445 5202 aa4.86□□□□□ -1.63
ATG9A-215ENST00000446716 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.63
ATG9A-215ENST00000446716 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
ATG9A-215ENST00000446716 DSTQ03001 7570 aaKnown RBP4.79□□□□□ -1.64
ATG9A-215ENST00000446716 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
ATG9A-215ENST00000446716 MACF1Q9UPN3 7388 aaKnown RBP4.72□□□□□ -1.65
ATG9A-215ENST00000446716 KMT2DO14686 5537 aa4.66□□□□□ -1.66
ATG9A-215ENST00000446716 NEBP20929 6669 aa4.56□□□□□ -1.68
ATG9A-215ENST00000446716 LCE1CQ5T751 118 aa4.52□□□□□ -1.69
ATG9A-215ENST00000446716 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
ATG9A-215ENST00000446716 LCE1FQ5T754 118 aa4.52□□□□□ -1.69
ATG9A-215ENST00000446716 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
ATG9A-215ENST00000446716 MDN1Q9NU22 5596 aa4.42□□□□□ -1.7
ATG9A-215ENST00000446716 SSPOA2VEC9 5147 aa4.4□□□□□ -1.7
ATG9A-215ENST00000446716 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
ATG9A-215ENST00000446716 GPR98Q8WXG9 6306 aa4.32□□□□□ -1.72
ATG9A-215ENST00000446716 MUC12Q9UKN1 5478 aa4.27□□□□□ -1.73
ATG9A-215ENST00000446716 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
ATG9A-215ENST00000446716 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
ATG9A-215ENST00000446716 MUC19Q7Z5P9 8384 aa4.16□□□□□ -1.74
ATG9A-215ENST00000446716 KRTAP5-4Q6L8H1 288 aa3.88□□□□□ -1.79
ATG9A-215ENST00000446716 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
ATG9A-215ENST00000446716 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
ATG9A-215ENST00000446716 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
ATG9A-215ENST00000446716 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
ATG9A-215ENST00000446716 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
ATG9A-215ENST00000446716 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
ATG9A-215ENST00000446716 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
ATG9A-215ENST00000446716 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
ATG9A-215ENST00000446716 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.86
ATG9A-215ENST00000446716 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
ATG9A-215ENST00000446716 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
ATG9A-215ENST00000446716 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
ATG9A-215ENST00000446716 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
ATG9A-215ENST00000446716 KRTAP5-10Q6L8G5 202 aa2.86□□□□□ -1.95
ATG9A-215ENST00000446716 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
ATG9A-215ENST00000446716 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
ATG9A-215ENST00000446716 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
ATG9A-215ENST00000446716 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
ATG9A-215ENST00000446716 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
ATG9A-215ENST00000446716 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.35□□□□□ -2.03
ATG9A-215ENST00000446716 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
ATG9A-215ENST00000446716 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms