RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 KRTAP20-1Q3LI63 56 aa6.03□□□□□ -1.44
SHANK3-203ENST00000445220 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
SHANK3-203ENST00000445220 MT1LQ93083 61 aa5.98□□□□□ -1.45
SHANK3-203ENST00000445220 HMCN2Q8NDA2 5059 aa5.97□□□□□ -1.45
SHANK3-203ENST00000445220 MUC17Q685J3 4493 aa5.97□□□□□ -1.45
SHANK3-203ENST00000445220 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.95□□□□□ -1.46
SHANK3-203ENST00000445220 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
SHANK3-203ENST00000445220 MT1EP04732 61 aa5.94□□□□□ -1.46
SHANK3-203ENST00000445220 FLGP20930 4061 aaPredicted RBP5.91□□□□□ -1.46
SHANK3-203ENST00000445220 SYNE2Q8WXH0 6885 aaKnown RBP5.9□□□□□ -1.47
SHANK3-203ENST00000445220 KRTAP6-3Q3LI67 103 aa5.85□□□□□ -1.47
SHANK3-203ENST00000445220 PRM1P04553 51 aa5.85□□□□□ -1.47
SHANK3-203ENST00000445220 MT4P47944 62 aa5.74□□□□□ -1.49
SHANK3-203ENST00000445220 MT1MQ8N339 61 aa5.74□□□□□ -1.49
SHANK3-203ENST00000445220 KRTAP2-3P0C7H8 128 aa5.72□□□□□ -1.49
SHANK3-203ENST00000445220 KRTAP2-4Q9BYR9 128 aa5.72□□□□□ -1.49
SHANK3-203ENST00000445220 SYNE1Q8NF91 8797 aaKnown RBP5.7□□□□□ -1.5
SHANK3-203ENST00000445220 MUC2Q02817 5179 aa5.68□□□□□ -1.5
SHANK3-203ENST00000445220 MT3P25713 68 aa5.61□□□□□ -1.51
SHANK3-203ENST00000445220 KRTAP2-1Q9BYU5 128 aa5.58□□□□□ -1.52
SHANK3-203ENST00000445220 LOC100996750A0A140TA64 210 aa5.56□□□□□ -1.52
SHANK3-203ENST00000445220 KRTAP19-7Q3SYF9 63 aa5.52□□□□□ -1.53
SHANK3-203ENST00000445220 KRTAP2-2Q9BYT5 123 aa5.51□□□□□ -1.53
SHANK3-203ENST00000445220 KRTAP4-3Q9BYR4 195 aa5.44□□□□□ -1.54
SHANK3-203ENST00000445220 LCE1AQ5T7P2 110 aa5.42□□□□□ -1.54
SHANK3-203ENST00000445220 MT1AP04731 61 aa5.38□□□□□ -1.55
SHANK3-203ENST00000445220 KRTAP4-9Q9BYQ8 210 aa5.3□□□□□ -1.56
SHANK3-203ENST00000445220 LCE1BQ5T7P3 118 aa5.24□□□□□ -1.57
SHANK3-203ENST00000445220 LCE1DQ5T752 114 aa5.21□□□□□ -1.58
SHANK3-203ENST00000445220 KRTAP9-6A8MVA2 160 aa5.17□□□□□ -1.58
SHANK3-203ENST00000445220 LCE4AQ5TA78 99 aa5.17□□□□□ -1.58
SHANK3-203ENST00000445220 NEBP20929 6669 aa5.15□□□□□ -1.59
SHANK3-203ENST00000445220 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
SHANK3-203ENST00000445220 MACF1Q9UPN3 7388 aaKnown RBP5.12□□□□□ -1.59
SHANK3-203ENST00000445220 KRTAP6-2Q3LI66 62 aa5.1□□□□□ -1.59
SHANK3-203ENST00000445220 USH2AO75445 5202 aa5.09□□□□□ -1.6
SHANK3-203ENST00000445220 KMT2DO14686 5537 aa5.06□□□□□ -1.6
SHANK3-203ENST00000445220 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
SHANK3-203ENST00000445220 SSPOA2VEC9 5147 aa4.97□□□□□ -1.61
SHANK3-203ENST00000445220 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.62
SHANK3-203ENST00000445220 GPR98Q8WXG9 6306 aa4.94□□□□□ -1.62
SHANK3-203ENST00000445220 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
SHANK3-203ENST00000445220 FCGBPQ9Y6R7 5405 aaPredicted RBP4.91□□□□□ -1.62
SHANK3-203ENST00000445220 KRTAP5-9P26371 169 aa4.86□□□□□ -1.63
SHANK3-203ENST00000445220 DSTQ03001 7570 aaKnown RBP4.79□□□□□ -1.64
SHANK3-203ENST00000445220 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
SHANK3-203ENST00000445220 KRTAP9-9Q9BYP9 154 aa4.59□□□□□ -1.67
SHANK3-203ENST00000445220 KRTAP4-6Q9BYQ5 205 aa4.39□□□□□ -1.71
SHANK3-203ENST00000445220 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
SHANK3-203ENST00000445220 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
SHANK3-203ENST00000445220 LCE1FQ5T754 118 aa4.38□□□□□ -1.71
SHANK3-203ENST00000445220 MUC12Q9UKN1 5478 aa4.34□□□□□ -1.72
SHANK3-203ENST00000445220 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
SHANK3-203ENST00000445220 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
SHANK3-203ENST00000445220 MUC19Q7Z5P9 8384 aa4.16□□□□□ -1.74
SHANK3-203ENST00000445220 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
SHANK3-203ENST00000445220 KRTAP5-3Q6L8H2 238 aa3.98□□□□□ -1.77
SHANK3-203ENST00000445220 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
SHANK3-203ENST00000445220 AHNAK2Q8IVF2 5795 aa3.95□□□□□ -1.78
SHANK3-203ENST00000445220 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
SHANK3-203ENST00000445220 KRTAP4-12Q9BQ66 201 aa3.71□□□□□ -1.82
SHANK3-203ENST00000445220 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
SHANK3-203ENST00000445220 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
SHANK3-203ENST00000445220 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
SHANK3-203ENST00000445220 KRTAP5-8O75690 187 aa3.52□□□□□ -1.85
SHANK3-203ENST00000445220 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
SHANK3-203ENST00000445220 KRTAP5-10Q6L8G5 202 aa3.2□□□□□ -1.9
SHANK3-203ENST00000445220 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
SHANK3-203ENST00000445220 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
SHANK3-203ENST00000445220 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
SHANK3-203ENST00000445220 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
SHANK3-203ENST00000445220 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.96
SHANK3-203ENST00000445220 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
SHANK3-203ENST00000445220 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
SHANK3-203ENST00000445220 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
SHANK3-203ENST00000445220 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
SHANK3-203ENST00000445220 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 22 ms