RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 SPRR2DP22532 72 aa7.35□□□□□ -1.23
CTDSPL-206ENST00000443503 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
CTDSPL-206ENST00000443503 KRTAP19-6Q3LI70 58 aa7.25□□□□□ -1.25
CTDSPL-206ENST00000443503 MT1MQ8N339 61 aa7.15□□□□□ -1.26
CTDSPL-206ENST00000443503 LCE3DQ9BYE3 92 aa7.14□□□□□ -1.27
CTDSPL-206ENST00000443503 KRTAP19-7Q3SYF9 63 aa7.13□□□□□ -1.27
CTDSPL-206ENST00000443503 KRTAP4-3Q9BYR4 195 aa7.1□□□□□ -1.27
CTDSPL-206ENST00000443503 LOC100996750A0A140TA64 210 aa7.06□□□□□ -1.28
CTDSPL-206ENST00000443503 LCE3EQ5T5B0 92 aa7.02□□□□□ -1.29
CTDSPL-206ENST00000443503 KRTAP9-2Q9BYQ4 174 aa6.95□□□□□ -1.3
CTDSPL-206ENST00000443503 OBSCNQ5VST9 7968 aa6.94□□□□□ -1.3
CTDSPL-206ENST00000443503 LCE2DQ5TA82 110 aaPredicted RBP6.82□□□□□ -1.32
CTDSPL-206ENST00000443503 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
CTDSPL-206ENST00000443503 KRTAP9-6A8MVA2 160 aa6.67□□□□□ -1.34
CTDSPL-206ENST00000443503 MT3P25713 68 aa6.67□□□□□ -1.34
CTDSPL-206ENST00000443503 DSTQ03001 7570 aaKnown RBP6.66□□□□□ -1.34
CTDSPL-206ENST00000443503 SYNE2Q8WXH0 6885 aaKnown RBP6.66□□□□□ -1.34
CTDSPL-206ENST00000443503 KRTAP2-3P0C7H8 128 aa6.63□□□□□ -1.35
CTDSPL-206ENST00000443503 KRTAP2-4Q9BYR9 128 aa6.63□□□□□ -1.35
CTDSPL-206ENST00000443503 KRTAP2-1Q9BYU5 128 aa6.63□□□□□ -1.35
CTDSPL-206ENST00000443503 USH2AO75445 5202 aa6.62□□□□□ -1.35
CTDSPL-206ENST00000443503 MT4P47944 62 aa6.59□□□□□ -1.35
CTDSPL-206ENST00000443503 MT1AP04731 61 aa6.56□□□□□ -1.36
CTDSPL-206ENST00000443503 KRTAP4-9Q9BYQ8 210 aa6.53□□□□□ -1.36
CTDSPL-206ENST00000443503 KMT2DO14686 5537 aa6.48□□□□□ -1.37
CTDSPL-206ENST00000443503 PRM1P04553 51 aa6.46□□□□□ -1.37
CTDSPL-206ENST00000443503 LCE5AQ5TCM9 118 aa6.39□□□□□ -1.39
CTDSPL-206ENST00000443503 KRTAP9-6A0A140TA67 174 aa6.37□□□□□ -1.39
CTDSPL-206ENST00000443503 KRTAP6-1Q3LI64 71 aa6.31□□□□□ -1.4
CTDSPL-206ENST00000443503 LCE1AQ5T7P2 110 aa6.29□□□□□ -1.4
CTDSPL-206ENST00000443503 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
CTDSPL-206ENST00000443503 LCE1BQ5T7P3 118 aa6.22□□□□□ -1.41
CTDSPL-206ENST00000443503 KRTAP6-3Q3LI67 103 aa6.16□□□□□ -1.42
CTDSPL-206ENST00000443503 MUC12Q9UKN1 5478 aa6.15□□□□□ -1.42
CTDSPL-206ENST00000443503 KRTAP9-7A8MTY7 169 aa6.1□□□□□ -1.43
CTDSPL-206ENST00000443503 KRTAP6-2Q3LI66 62 aa6.09□□□□□ -1.43
CTDSPL-206ENST00000443503 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
CTDSPL-206ENST00000443503 SSPOA2VEC9 5147 aa6.07□□□□□ -1.44
CTDSPL-206ENST00000443503 MACF1Q9UPN3 7388 aaKnown RBP6.03□□□□□ -1.44
CTDSPL-206ENST00000443503 KRTAP9-4Q9BYQ2 154 aa6.02□□□□□ -1.45
CTDSPL-206ENST00000443503 KRTAP20-1Q3LI63 56 aa5.87□□□□□ -1.47
CTDSPL-206ENST00000443503 LCE4AQ5TA78 99 aa5.76□□□□□ -1.49
CTDSPL-206ENST00000443503 MDN1Q9NU22 5596 aa5.72□□□□□ -1.49
CTDSPL-206ENST00000443503 KRTAP2-2Q9BYT5 123 aa5.69□□□□□ -1.5
CTDSPL-206ENST00000443503 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
CTDSPL-206ENST00000443503 NEBP20929 6669 aa5.45□□□□□ -1.54
CTDSPL-206ENST00000443503 MUC19Q7Z5P9 8384 aa5.43□□□□□ -1.54
CTDSPL-206ENST00000443503 KRTAP4-6Q9BYQ5 205 aa5.31□□□□□ -1.56
CTDSPL-206ENST00000443503 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
CTDSPL-206ENST00000443503 LCE1CQ5T751 118 aa5.04□□□□□ -1.6
CTDSPL-206ENST00000443503 LCE1EQ5T753 118 aa5.04□□□□□ -1.6
CTDSPL-206ENST00000443503 LCE1FQ5T754 118 aa5.04□□□□□ -1.6
CTDSPL-206ENST00000443503 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
CTDSPL-206ENST00000443503 GPR98Q8WXG9 6306 aa4.87□□□□□ -1.63
CTDSPL-206ENST00000443503 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
CTDSPL-206ENST00000443503 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
CTDSPL-206ENST00000443503 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
CTDSPL-206ENST00000443503 KRTAP5-4Q6L8H1 288 aa4.69□□□□□ -1.66
CTDSPL-206ENST00000443503 HMCN1Q96RW7 5635 aa4.56□□□□□ -1.68
CTDSPL-206ENST00000443503 KRTAP4-4Q9BYR3 166 aa4.52□□□□□ -1.69
CTDSPL-206ENST00000443503 KRTAP4-12Q9BQ66 201 aa4.45□□□□□ -1.7
CTDSPL-206ENST00000443503 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
CTDSPL-206ENST00000443503 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
CTDSPL-206ENST00000443503 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
CTDSPL-206ENST00000443503 KRTAP5-2Q701N4 177 aa4.03□□□□□ -1.76
CTDSPL-206ENST00000443503 KRTAP5-10Q6L8G5 202 aa3.91□□□□□ -1.78
CTDSPL-206ENST00000443503 KRTAP5-8O75690 187 aa3.89□□□□□ -1.79
CTDSPL-206ENST00000443503 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
CTDSPL-206ENST00000443503 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
CTDSPL-206ENST00000443503 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
CTDSPL-206ENST00000443503 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
CTDSPL-206ENST00000443503 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
CTDSPL-206ENST00000443503 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
CTDSPL-206ENST00000443503 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
CTDSPL-206ENST00000443503 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
CTDSPL-206ENST00000443503 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
CTDSPL-206ENST00000443503 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 7.3 ms