RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 PCLOQ9Y6V0 5065 aa4.54□□□□□ -1.68
CDH23-207ENST00000442677 LRP2P98164 4655 aa4.52□□□□□ -1.69
CDH23-207ENST00000442677 TNXBP22105 4242 aa4.52□□□□□ -1.69
CDH23-207ENST00000442677 MUC17Q685J3 4493 aa4.51□□□□□ -1.69
CDH23-207ENST00000442677 KRTAP19-2Q3LHN2 52 aa4.51□□□□□ -1.69
CDH23-207ENST00000442677 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
CDH23-207ENST00000442677 KRTAP19-6Q3LI70 58 aa4.45□□□□□ -1.7
CDH23-207ENST00000442677 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
CDH23-207ENST00000442677 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
CDH23-207ENST00000442677 KRTAP2-1Q9BYU5 128 aa4.41□□□□□ -1.7
CDH23-207ENST00000442677 KMT2CQ8NEZ4 4911 aaKnown RBP4.41□□□□□ -1.7
CDH23-207ENST00000442677 KRTAP9-6A0A140TA67 174 aa4.4□□□□□ -1.7
CDH23-207ENST00000442677 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
CDH23-207ENST00000442677 MT1AP04731 61 aa4.35□□□□□ -1.71
CDH23-207ENST00000442677 KRTAP20-1Q3LI63 56 aa4.29□□□□□ -1.72
CDH23-207ENST00000442677 KRTAP19-7Q3SYF9 63 aa4.26□□□□□ -1.73
CDH23-207ENST00000442677 EPPK1P58107 5090 aaKnown RBP4.24□□□□□ -1.73
CDH23-207ENST00000442677 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
CDH23-207ENST00000442677 KRTAP9-7A8MTY7 169 aa4.21□□□□□ -1.74
CDH23-207ENST00000442677 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
CDH23-207ENST00000442677 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
CDH23-207ENST00000442677 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
CDH23-207ENST00000442677 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
CDH23-207ENST00000442677 ABCA13Q86UQ4 5058 aa4.18□□□□□ -1.74
CDH23-207ENST00000442677 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
CDH23-207ENST00000442677 LCE2AQ5TA79 106 aaPredicted RBP4.12□□□□□ -1.75
CDH23-207ENST00000442677 KRTAP9-6A8MVA2 160 aa4.09□□□□□ -1.75
CDH23-207ENST00000442677 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
CDH23-207ENST00000442677 FAT4Q6V0I7 4981 aa4.05□□□□□ -1.76
CDH23-207ENST00000442677 FSIP2Q5CZC0 6907 aa4.04□□□□□ -1.76
CDH23-207ENST00000442677 RNF213Q63HN8 5207 aa4□□□□□ -1.77
CDH23-207ENST00000442677 HMCN2Q8NDA2 5059 aa3.99□□□□□ -1.77
CDH23-207ENST00000442677 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
CDH23-207ENST00000442677 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
CDH23-207ENST00000442677 KRTAP6-3Q3LI67 103 aa3.97□□□□□ -1.77
CDH23-207ENST00000442677 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
CDH23-207ENST00000442677 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.93□□□□□ -1.78
CDH23-207ENST00000442677 MUC2Q02817 5179 aa3.87□□□□□ -1.79
CDH23-207ENST00000442677 UBR4Q5T4S7 5183 aa3.85□□□□□ -1.79
CDH23-207ENST00000442677 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
CDH23-207ENST00000442677 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
CDH23-207ENST00000442677 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
CDH23-207ENST00000442677 KRTAP20-2Q3LI61 65 aa3.48□□□□□ -1.85
CDH23-207ENST00000442677 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
CDH23-207ENST00000442677 USH2AO75445 5202 aa3.36□□□□□ -1.87
CDH23-207ENST00000442677 KRTAP4-6Q9BYQ5 205 aa3.36□□□□□ -1.87
CDH23-207ENST00000442677 NEBP20929 6669 aa3.3□□□□□ -1.88
CDH23-207ENST00000442677 KMT2DO14686 5537 aa3.27□□□□□ -1.89
CDH23-207ENST00000442677 DSTQ03001 7570 aaKnown RBP3.27□□□□□ -1.89
CDH23-207ENST00000442677 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
CDH23-207ENST00000442677 KRTAP4-2Q9BYR5 136 aa3.25□□□□□ -1.89
CDH23-207ENST00000442677 FCGBPQ9Y6R7 5405 aaPredicted RBP3.25□□□□□ -1.89
CDH23-207ENST00000442677 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.9
CDH23-207ENST00000442677 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
CDH23-207ENST00000442677 SSPOA2VEC9 5147 aa3.16□□□□□ -1.9
CDH23-207ENST00000442677 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
CDH23-207ENST00000442677 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
CDH23-207ENST00000442677 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
CDH23-207ENST00000442677 MUC12Q9UKN1 5478 aa2.84□□□□□ -1.96
CDH23-207ENST00000442677 MDN1Q9NU22 5596 aa2.71□□□□□ -1.98
CDH23-207ENST00000442677 GPR98Q8WXG9 6306 aa2.6□□□□□ -1.99
CDH23-207ENST00000442677 KRTAP5-3Q6L8H2 238 aa2.58□□□□□ -2
CDH23-207ENST00000442677 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
CDH23-207ENST00000442677 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
CDH23-207ENST00000442677 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
CDH23-207ENST00000442677 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
CDH23-207ENST00000442677 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
CDH23-207ENST00000442677 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
CDH23-207ENST00000442677 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
CDH23-207ENST00000442677 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
CDH23-207ENST00000442677 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
CDH23-207ENST00000442677 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
CDH23-207ENST00000442677 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
CDH23-207ENST00000442677 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
CDH23-207ENST00000442677 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
CDH23-207ENST00000442677 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
CDH23-207ENST00000442677 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
CDH23-207ENST00000442677 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 53.9 ms