RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 FAT4Q6V0I7 4981 aa1.97□□□□□ -2.09
USP46-201ENST00000441222 KRTAP4-7Q9BYR0 210 aa1.96□□□□□ -2.1
USP46-201ENST00000441222 KMT2CQ8NEZ4 4911 aaKnown RBP1.94□□□□□ -2.1
USP46-201ENST00000441222 TNXBP22105 4242 aa1.94□□□□□ -2.1
USP46-201ENST00000441222 MT1AP04731 61 aa1.92□□□□□ -2.1
USP46-201ENST00000441222 LCE5AQ5TCM9 118 aa1.9□□□□□ -2.1
USP46-201ENST00000441222 KRTAP2-3P0C7H8 128 aa1.89□□□□□ -2.11
USP46-201ENST00000441222 KRTAP9-2Q9BYQ4 174 aa1.89□□□□□ -2.11
USP46-201ENST00000441222 KRTAP2-4Q9BYR9 128 aa1.89□□□□□ -2.11
USP46-201ENST00000441222 KRTAP2-1Q9BYU5 128 aa1.89□□□□□ -2.11
USP46-201ENST00000441222 LPAP08519 4548 aa1.89□□□□□ -2.11
USP46-201ENST00000441222 MUC2Q02817 5179 aa1.89□□□□□ -2.11
USP46-201ENST00000441222 LOC100996750A0A140TA64 210 aa1.88□□□□□ -2.11
USP46-201ENST00000441222 LCE1AQ5T7P2 110 aa1.87□□□□□ -2.11
USP46-201ENST00000441222 KRTAP19-2Q3LHN2 52 aa1.86□□□□□ -2.11
USP46-201ENST00000441222 HERC1Q15751 4861 aa1.86□□□□□ -2.11
USP46-201ENST00000441222 LRP2P98164 4655 aa1.85□□□□□ -2.11
USP46-201ENST00000441222 KRTAP20-1Q3LI63 56 aa1.84□□□□□ -2.11
USP46-201ENST00000441222 KRTAP4-3Q9BYR4 195 aa1.84□□□□□ -2.12
USP46-201ENST00000441222 KRTAP19-7Q3SYF9 63 aa1.82□□□□□ -2.12
USP46-201ENST00000441222 USH2AO75445 5202 aa1.8□□□□□ -2.12
USP46-201ENST00000441222 KRTAP9-6A0A140TA67 174 aa1.8□□□□□ -2.12
USP46-201ENST00000441222 MUC17Q685J3 4493 aa1.79□□□□□ -2.12
USP46-201ENST00000441222 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
USP46-201ENST00000441222 LCE1EQ5T753 118 aa1.78□□□□□ -2.12
USP46-201ENST00000441222 LCE1FQ5T754 118 aa1.78□□□□□ -2.12
USP46-201ENST00000441222 KRTAP6-2Q3LI66 62 aa1.77□□□□□ -2.13
USP46-201ENST00000441222 KRTAP9-4Q9BYQ2 154 aa1.77□□□□□ -2.13
USP46-201ENST00000441222 KRTAP4-9Q9BYQ8 210 aa1.76□□□□□ -2.13
USP46-201ENST00000441222 SYNE1Q8NF91 8797 aaKnown RBP1.76□□□□□ -2.13
USP46-201ENST00000441222 KRTAP6-3Q3LI67 103 aa1.75□□□□□ -2.13
USP46-201ENST00000441222 OBSCNQ5VST9 7968 aa1.74□□□□□ -2.13
USP46-201ENST00000441222 LCE2AQ5TA79 106 aaPredicted RBP1.73□□□□□ -2.13
USP46-201ENST00000441222 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
USP46-201ENST00000441222 KRTAP9-7A8MTY7 169 aa1.73□□□□□ -2.13
USP46-201ENST00000441222 KRTAP6-1Q3LI64 71 aa1.72□□□□□ -2.13
USP46-201ENST00000441222 KRTAP2-2Q9BYT5 123 aa1.71□□□□□ -2.14
USP46-201ENST00000441222 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.14
USP46-201ENST00000441222 SSPOA2VEC9 5147 aa1.7□□□□□ -2.14
USP46-201ENST00000441222 SYNE2Q8WXH0 6885 aaKnown RBP1.66□□□□□ -2.14
USP46-201ENST00000441222 KRTAP9-9Q9BYP9 154 aa1.65□□□□□ -2.15
USP46-201ENST00000441222 FSIP2Q5CZC0 6907 aa1.62□□□□□ -2.15
USP46-201ENST00000441222 KRTAP9-6A8MVA2 160 aa1.61□□□□□ -2.15
USP46-201ENST00000441222 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.61□□□□□ -2.15
USP46-201ENST00000441222 KMT2DO14686 5537 aa1.58□□□□□ -2.16
USP46-201ENST00000441222 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.58□□□□□ -2.16
USP46-201ENST00000441222 GPR98Q8WXG9 6306 aa1.53□□□□□ -2.16
USP46-201ENST00000441222 FCGBPQ9Y6R7 5405 aaPredicted RBP1.48□□□□□ -2.17
USP46-201ENST00000441222 KRTAP4-11Q9BYQ6 195 aa1.47□□□□□ -2.17
USP46-201ENST00000441222 DSTQ03001 7570 aaKnown RBP1.46□□□□□ -2.18
USP46-201ENST00000441222 KRTAP4-6Q9BYQ5 205 aa1.46□□□□□ -2.18
USP46-201ENST00000441222 MUC12Q9UKN1 5478 aa1.43□□□□□ -2.18
USP46-201ENST00000441222 KRTAP5-9P26371 169 aa1.41□□□□□ -2.18
USP46-201ENST00000441222 KRTAP20-2Q3LI61 65 aa1.4□□□□□ -2.19
USP46-201ENST00000441222 AHNAK2Q8IVF2 5795 aa1.35□□□□□ -2.19
USP46-201ENST00000441222 MDN1Q9NU22 5596 aa1.33□□□□□ -2.2
USP46-201ENST00000441222 KRTAP5-4Q6L8H1 288 aa1.32□□□□□ -2.2
USP46-201ENST00000441222 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
USP46-201ENST00000441222 KRTAP4-4Q9BYR3 166 aa1.29□□□□□ -2.2
USP46-201ENST00000441222 HMCN1Q96RW7 5635 aa1.27□□□□□ -2.21
USP46-201ENST00000441222 MACF1Q9UPN3 7388 aaKnown RBP1.27□□□□□ -2.21
USP46-201ENST00000441222 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
USP46-201ENST00000441222 KRTAP4-12Q9BQ66 201 aa1.26□□□□□ -2.21
USP46-201ENST00000441222 KRTAP4-2Q9BYR5 136 aa1.26□□□□□ -2.21
USP46-201ENST00000441222 NEBP20929 6669 aa1.23□□□□□ -2.21
USP46-201ENST00000441222 KRTAP5-5Q701N2 237 aaPredicted RBP1.22□□□□□ -2.21
USP46-201ENST00000441222 MUC5ACP98088 5654 aa1.15□□□□□ -2.23
USP46-201ENST00000441222 KRTAP5-3Q6L8H2 238 aa1.14□□□□□ -2.23
USP46-201ENST00000441222 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
USP46-201ENST00000441222 KRTAP5-10Q6L8G5 202 aa1.02□□□□□ -2.25
USP46-201ENST00000441222 KRTAP5-8O75690 187 aa0.98□□□□□ -2.25
USP46-201ENST00000441222 KRTAP5-11Q6L8G4 156 aa0.95□□□□□ -2.26
USP46-201ENST00000441222 KRTAP5-1Q6L8H4 278 aa0.87□□□□□ -2.27
USP46-201ENST00000441222 KRTAP5-7Q6L8G8 165 aa0.86□□□□□ -2.27
USP46-201ENST00000441222 KRTAP21-2Q3LI59 83 aa0.82□□□□□ -2.28
USP46-201ENST00000441222 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
USP46-201ENST00000441222 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 121.5 ms