RNA–Protein interactions for RNA: ENST00000440111.6

TSC1-203, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,463 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-203ENST00000440111 KRTAP2-3P0C7H8 128 aa2.43□□□□□ -2.02
TSC1-203ENST00000440111 KRTAP2-4Q9BYR9 128 aa2.43□□□□□ -2.02
TSC1-203ENST00000440111 KRTAP2-1Q9BYU5 128 aa2.43□□□□□ -2.02
TSC1-203ENST00000440111 LPAP08519 4548 aa2.41□□□□□ -2.02
TSC1-203ENST00000440111 KRTAP19-3Q7Z4W3 81 aa2.4□□□□□ -2.02
TSC1-203ENST00000440111 MT4P47944 62 aa2.37□□□□□ -2.03
TSC1-203ENST00000440111 KRTAP19-7Q3SYF9 63 aa2.37□□□□□ -2.03
TSC1-203ENST00000440111 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
TSC1-203ENST00000440111 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
TSC1-203ENST00000440111 USH2AO75445 5202 aa2.35□□□□□ -2.03
TSC1-203ENST00000440111 LCE1DQ5T752 114 aa2.35□□□□□ -2.03
TSC1-203ENST00000440111 KRTAP4-8A0A0G2JLE6 195 aa2.34□□□□□ -2.03
TSC1-203ENST00000440111 KRTAP4-8Q9BYQ9 185 aa2.34□□□□□ -2.03
TSC1-203ENST00000440111 MT1MQ8N339 61 aa2.32□□□□□ -2.04
TSC1-203ENST00000440111 LCE5AQ5TCM9 118 aa2.28□□□□□ -2.04
TSC1-203ENST00000440111 MT1AP04731 61 aa2.27□□□□□ -2.05
TSC1-203ENST00000440111 KRTAP4-7Q9BYR0 210 aa2.26□□□□□ -2.05
TSC1-203ENST00000440111 LCE1AQ5T7P2 110 aa2.25□□□□□ -2.05
TSC1-203ENST00000440111 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
TSC1-203ENST00000440111 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
TSC1-203ENST00000440111 LCE1EQ5T753 118 aa2.22□□□□□ -2.05
TSC1-203ENST00000440111 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
TSC1-203ENST00000440111 FSIP2Q5CZC0 6907 aa2.17□□□□□ -2.06
TSC1-203ENST00000440111 MUC2Q02817 5179 aa2.17□□□□□ -2.06
TSC1-203ENST00000440111 LCE4AQ5TA78 99 aa2.16□□□□□ -2.06
TSC1-203ENST00000440111 KRTAP9-2Q9BYQ4 174 aa2.15□□□□□ -2.07
TSC1-203ENST00000440111 LOC100996750A0A140TA64 210 aa2.14□□□□□ -2.07
TSC1-203ENST00000440111 KRTAP9-6A8MVA2 160 aa2.14□□□□□ -2.07
TSC1-203ENST00000440111 KRTAP4-3Q9BYR4 195 aa2.13□□□□□ -2.07
TSC1-203ENST00000440111 SSPOA2VEC9 5147 aa2.11□□□□□ -2.07
TSC1-203ENST00000440111 OBSCNQ5VST9 7968 aa2.09□□□□□ -2.07
TSC1-203ENST00000440111 SYNE2Q8WXH0 6885 aaKnown RBP2.09□□□□□ -2.07
TSC1-203ENST00000440111 KRTAP4-9Q9BYQ8 210 aa2.08□□□□□ -2.08
TSC1-203ENST00000440111 KRTAP9-9Q9BYP9 154 aa2.07□□□□□ -2.08
TSC1-203ENST00000440111 KRTAP6-3Q3LI67 103 aa2.07□□□□□ -2.08
TSC1-203ENST00000440111 KRTAP9-6A0A140TA67 174 aa2.05□□□□□ -2.08
TSC1-203ENST00000440111 KRTAP5-9P26371 169 aa2.04□□□□□ -2.08
TSC1-203ENST00000440111 KRTAP9-4Q9BYQ2 154 aa2.01□□□□□ -2.09
TSC1-203ENST00000440111 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
TSC1-203ENST00000440111 KRTAP2-2Q9BYT5 123 aa1.97□□□□□ -2.09
TSC1-203ENST00000440111 KRTAP9-7A8MTY7 169 aa1.95□□□□□ -2.1
TSC1-203ENST00000440111 KRTAP6-1Q3LI64 71 aa1.95□□□□□ -2.1
TSC1-203ENST00000440111 KMT2DO14686 5537 aa1.94□□□□□ -2.1
TSC1-203ENST00000440111 NEBP20929 6669 aa1.94□□□□□ -2.1
TSC1-203ENST00000440111 FCGBPQ9Y6R7 5405 aaPredicted RBP1.92□□□□□ -2.1
TSC1-203ENST00000440111 MACF1Q9UPN3 7388 aaKnown RBP1.9□□□□□ -2.1
TSC1-203ENST00000440111 MDN1Q9NU22 5596 aa1.88□□□□□ -2.11
TSC1-203ENST00000440111 MUC12Q9UKN1 5478 aa1.87□□□□□ -2.11
TSC1-203ENST00000440111 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
TSC1-203ENST00000440111 KRTAP5-5Q701N2 237 aaPredicted RBP1.84□□□□□ -2.11
TSC1-203ENST00000440111 DSTQ03001 7570 aaKnown RBP1.84□□□□□ -2.11
TSC1-203ENST00000440111 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.83□□□□□ -2.12
TSC1-203ENST00000440111 KRTAP4-11Q9BYQ6 195 aa1.76□□□□□ -2.13
TSC1-203ENST00000440111 KRTAP5-4Q6L8H1 288 aa1.74□□□□□ -2.13
TSC1-203ENST00000440111 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
TSC1-203ENST00000440111 KRTAP4-6Q9BYQ5 205 aa1.7□□□□□ -2.14
TSC1-203ENST00000440111 KRTAP4-4Q9BYR3 166 aa1.7□□□□□ -2.14
TSC1-203ENST00000440111 KRTAP4-12Q9BQ66 201 aa1.69□□□□□ -2.14
TSC1-203ENST00000440111 KRTAP4-2Q9BYR5 136 aa1.69□□□□□ -2.14
TSC1-203ENST00000440111 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
TSC1-203ENST00000440111 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
TSC1-203ENST00000440111 KRTAP5-2Q701N4 177 aa1.59□□□□□ -2.16
TSC1-203ENST00000440111 GPR98Q8WXG9 6306 aa1.56□□□□□ -2.16
TSC1-203ENST00000440111 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
TSC1-203ENST00000440111 MUC5ACP98088 5654 aa1.5□□□□□ -2.17
TSC1-203ENST00000440111 KRTAP5-3Q6L8H2 238 aa1.48□□□□□ -2.17
TSC1-203ENST00000440111 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
TSC1-203ENST00000440111 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
TSC1-203ENST00000440111 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.41□□□□□ -2.18
TSC1-203ENST00000440111 KRTAP5-10Q6L8G5 202 aa1.39□□□□□ -2.19
TSC1-203ENST00000440111 KRTAP5-1Q6L8H4 278 aa1.34□□□□□ -2.19
TSC1-203ENST00000440111 KRTAP5-7Q6L8G8 165 aa1.33□□□□□ -2.2
TSC1-203ENST00000440111 KRTAP5-11Q6L8G4 156 aa1.32□□□□□ -2.2
TSC1-203ENST00000440111 PHGR1C9JFL3 82 aa1.27□□□□□ -2.21
TSC1-203ENST00000440111 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
TSC1-203ENST00000440111 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
TSC1-203ENST00000440111 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 68.5 ms