RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 HMCN2Q8NDA2 5059 aa3.74□□□□□ -1.81
CCBE1-202ENST00000439986 RNF213Q63HN8 5207 aa3.74□□□□□ -1.81
CCBE1-202ENST00000439986 MT1LQ93083 61 aa3.74□□□□□ -1.81
CCBE1-202ENST00000439986 FAT4Q6V0I7 4981 aa3.72□□□□□ -1.81
CCBE1-202ENST00000439986 MT1EP04732 61 aa3.69□□□□□ -1.82
CCBE1-202ENST00000439986 LOC100996750A0A140TA64 210 aa3.65□□□□□ -1.82
CCBE1-202ENST00000439986 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
CCBE1-202ENST00000439986 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
CCBE1-202ENST00000439986 FSIP2Q5CZC0 6907 aa3.58□□□□□ -1.84
CCBE1-202ENST00000439986 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
CCBE1-202ENST00000439986 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
CCBE1-202ENST00000439986 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
CCBE1-202ENST00000439986 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
CCBE1-202ENST00000439986 KRTAP2-3P0C7H8 128 aa3.54□□□□□ -1.84
CCBE1-202ENST00000439986 KRTAP2-4Q9BYR9 128 aa3.54□□□□□ -1.84
CCBE1-202ENST00000439986 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
CCBE1-202ENST00000439986 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
CCBE1-202ENST00000439986 MT1MQ8N339 61 aa3.53□□□□□ -1.84
CCBE1-202ENST00000439986 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
CCBE1-202ENST00000439986 KRTAP9-2Q9BYQ4 174 aa3.43□□□□□ -1.86
CCBE1-202ENST00000439986 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
CCBE1-202ENST00000439986 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
CCBE1-202ENST00000439986 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
CCBE1-202ENST00000439986 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
CCBE1-202ENST00000439986 KRTAP9-6A0A140TA67 174 aa3.38□□□□□ -1.87
CCBE1-202ENST00000439986 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
CCBE1-202ENST00000439986 KRTAP20-1Q3LI63 56 aa3.29□□□□□ -1.88
CCBE1-202ENST00000439986 FCGBPQ9Y6R7 5405 aaPredicted RBP3.29□□□□□ -1.88
CCBE1-202ENST00000439986 KRTAP9-7A8MTY7 169 aa3.29□□□□□ -1.88
CCBE1-202ENST00000439986 KMT2DO14686 5537 aa3.28□□□□□ -1.88
CCBE1-202ENST00000439986 USH2AO75445 5202 aa3.26□□□□□ -1.89
CCBE1-202ENST00000439986 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
CCBE1-202ENST00000439986 MT1AP04731 61 aa3.25□□□□□ -1.89
CCBE1-202ENST00000439986 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
CCBE1-202ENST00000439986 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
CCBE1-202ENST00000439986 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
CCBE1-202ENST00000439986 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.89
CCBE1-202ENST00000439986 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
CCBE1-202ENST00000439986 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
CCBE1-202ENST00000439986 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
CCBE1-202ENST00000439986 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
CCBE1-202ENST00000439986 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
CCBE1-202ENST00000439986 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
CCBE1-202ENST00000439986 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
CCBE1-202ENST00000439986 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
CCBE1-202ENST00000439986 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.9□□□□□ -1.95
CCBE1-202ENST00000439986 MACF1Q9UPN3 7388 aaKnown RBP2.84□□□□□ -1.95
CCBE1-202ENST00000439986 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
CCBE1-202ENST00000439986 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
CCBE1-202ENST00000439986 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
CCBE1-202ENST00000439986 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
CCBE1-202ENST00000439986 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
CCBE1-202ENST00000439986 MDN1Q9NU22 5596 aa2.57□□□□□ -2
CCBE1-202ENST00000439986 KRTAP4-6Q9BYQ5 205 aa2.57□□□□□ -2
CCBE1-202ENST00000439986 KRTAP4-12Q9BQ66 201 aa2.54□□□□□ -2
CCBE1-202ENST00000439986 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
CCBE1-202ENST00000439986 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
CCBE1-202ENST00000439986 NEBP20929 6669 aa2.45□□□□□ -2.02
CCBE1-202ENST00000439986 KRTAP5-4Q6L8H1 288 aa2.23□□□□□ -2.05
CCBE1-202ENST00000439986 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
CCBE1-202ENST00000439986 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
CCBE1-202ENST00000439986 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
CCBE1-202ENST00000439986 GPR98Q8WXG9 6306 aa2.01□□□□□ -2.09
CCBE1-202ENST00000439986 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
CCBE1-202ENST00000439986 KRTAP5-3Q6L8H2 238 aa1.92□□□□□ -2.1
CCBE1-202ENST00000439986 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
CCBE1-202ENST00000439986 PHGR1C9JFL3 82 aa1.9□□□□□ -2.1
CCBE1-202ENST00000439986 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
CCBE1-202ENST00000439986 KRTAP5-1Q6L8H4 278 aa1.75□□□□□ -2.13
CCBE1-202ENST00000439986 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
CCBE1-202ENST00000439986 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
CCBE1-202ENST00000439986 MUC5BQ9HC84 5762 aaPredicted RBP1.7□□□□□ -2.14
CCBE1-202ENST00000439986 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
CCBE1-202ENST00000439986 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
CCBE1-202ENST00000439986 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
CCBE1-202ENST00000439986 KRTAP5-7Q6L8G8 165 aa1.58□□□□□ -2.16
CCBE1-202ENST00000439986 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 41.7 ms