RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 KRTAP20-1Q3LI63 56 aa4.05□□□□□ -1.76
LRCH3-206ENST00000438796 RYR2Q92736 4967 aa4.01□□□□□ -1.77
LRCH3-206ENST00000438796 MUC17Q685J3 4493 aa4.01□□□□□ -1.77
LRCH3-206ENST00000438796 KRTAP19-2Q3LHN2 52 aa3.98□□□□□ -1.77
LRCH3-206ENST00000438796 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
LRCH3-206ENST00000438796 ABCA13Q86UQ4 5058 aa3.94□□□□□ -1.78
LRCH3-206ENST00000438796 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
LRCH3-206ENST00000438796 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
LRCH3-206ENST00000438796 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
LRCH3-206ENST00000438796 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
LRCH3-206ENST00000438796 HERC2O95714 4834 aa3.9□□□□□ -1.78
LRCH3-206ENST00000438796 KMT2CQ8NEZ4 4911 aaKnown RBP3.89□□□□□ -1.79
LRCH3-206ENST00000438796 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
LRCH3-206ENST00000438796 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
LRCH3-206ENST00000438796 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
LRCH3-206ENST00000438796 KRTAP2-1Q9BYU5 128 aa3.87□□□□□ -1.79
LRCH3-206ENST00000438796 PCLOQ9Y6V0 5065 aa3.87□□□□□ -1.79
LRCH3-206ENST00000438796 MT1AP04731 61 aa3.85□□□□□ -1.79
LRCH3-206ENST00000438796 HERC1Q15751 4861 aa3.85□□□□□ -1.79
LRCH3-206ENST00000438796 UBR4Q5T4S7 5183 aa3.83□□□□□ -1.8
LRCH3-206ENST00000438796 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
LRCH3-206ENST00000438796 EPPK1P58107 5090 aaKnown RBP3.79□□□□□ -1.8
LRCH3-206ENST00000438796 KRTAP19-7Q3SYF9 63 aa3.78□□□□□ -1.8
LRCH3-206ENST00000438796 BIRC6Q9NR09 4857 aa3.78□□□□□ -1.8
LRCH3-206ENST00000438796 RNF213Q63HN8 5207 aa3.75□□□□□ -1.81
LRCH3-206ENST00000438796 FSIP2Q5CZC0 6907 aa3.73□□□□□ -1.81
LRCH3-206ENST00000438796 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
LRCH3-206ENST00000438796 LCE2AQ5TA79 106 aaPredicted RBP3.69□□□□□ -1.82
LRCH3-206ENST00000438796 KRTAP9-4Q9BYQ2 154 aa3.65□□□□□ -1.83
LRCH3-206ENST00000438796 HMCN2Q8NDA2 5059 aa3.65□□□□□ -1.83
LRCH3-206ENST00000438796 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
LRCH3-206ENST00000438796 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
LRCH3-206ENST00000438796 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
LRCH3-206ENST00000438796 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
LRCH3-206ENST00000438796 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
LRCH3-206ENST00000438796 FAT4Q6V0I7 4981 aa3.47□□□□□ -1.85
LRCH3-206ENST00000438796 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
LRCH3-206ENST00000438796 MUC2Q02817 5179 aa3.36□□□□□ -1.87
LRCH3-206ENST00000438796 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
LRCH3-206ENST00000438796 KRTAP4-11Q9BYQ6 195 aa3.25□□□□□ -1.89
LRCH3-206ENST00000438796 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
LRCH3-206ENST00000438796 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
LRCH3-206ENST00000438796 USH2AO75445 5202 aa3.22□□□□□ -1.89
LRCH3-206ENST00000438796 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.9
LRCH3-206ENST00000438796 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
LRCH3-206ENST00000438796 SSPOA2VEC9 5147 aa3.12□□□□□ -1.91
LRCH3-206ENST00000438796 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
LRCH3-206ENST00000438796 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
LRCH3-206ENST00000438796 KMT2DO14686 5537 aa3.02□□□□□ -1.93
LRCH3-206ENST00000438796 DSTQ03001 7570 aaKnown RBP2.9□□□□□ -1.95
LRCH3-206ENST00000438796 FCGBPQ9Y6R7 5405 aaPredicted RBP2.88□□□□□ -1.95
LRCH3-206ENST00000438796 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
LRCH3-206ENST00000438796 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
LRCH3-206ENST00000438796 NEBP20929 6669 aa2.79□□□□□ -1.96
LRCH3-206ENST00000438796 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
LRCH3-206ENST00000438796 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
LRCH3-206ENST00000438796 MUC12Q9UKN1 5478 aa2.66□□□□□ -1.98
LRCH3-206ENST00000438796 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
LRCH3-206ENST00000438796 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
LRCH3-206ENST00000438796 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
LRCH3-206ENST00000438796 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
LRCH3-206ENST00000438796 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
LRCH3-206ENST00000438796 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
LRCH3-206ENST00000438796 HMCN1Q96RW7 5635 aa2.19□□□□□ -2.06
LRCH3-206ENST00000438796 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
LRCH3-206ENST00000438796 AHNAK2Q8IVF2 5795 aa2.07□□□□□ -2.08
LRCH3-206ENST00000438796 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
LRCH3-206ENST00000438796 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
LRCH3-206ENST00000438796 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
LRCH3-206ENST00000438796 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
LRCH3-206ENST00000438796 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
LRCH3-206ENST00000438796 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
LRCH3-206ENST00000438796 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
LRCH3-206ENST00000438796 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
LRCH3-206ENST00000438796 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.51□□□□□ -2.17
LRCH3-206ENST00000438796 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
LRCH3-206ENST00000438796 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 9.5 ms