RNA–Protein interactions for RNA: ENST00000436792.6

VPS8-207, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene VPS8, Length 5,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-207ENST00000436792 LCE1DQ5T752 114 aa2.91□□□□□ -1.94
VPS8-207ENST00000436792 SYNE2Q8WXH0 6885 aaKnown RBP2.91□□□□□ -1.94
VPS8-207ENST00000436792 FRAS1Q86XX4 4008 aa2.9□□□□□ -1.95
VPS8-207ENST00000436792 CSMD3Q7Z407 3707 aa2.89□□□□□ -1.95
VPS8-207ENST00000436792 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
VPS8-207ENST00000436792 LCE5AQ5TCM9 118 aa2.86□□□□□ -1.95
VPS8-207ENST00000436792 ABCA13Q86UQ4 5058 aa2.85□□□□□ -1.95
VPS8-207ENST00000436792 PRKDCP78527 4128 aaKnown RBP2.84□□□□□ -1.95
VPS8-207ENST00000436792 KMT2AQ03164 3969 aa2.84□□□□□ -1.95
VPS8-207ENST00000436792 UBR4Q5T4S7 5183 aa2.83□□□□□ -1.96
VPS8-207ENST00000436792 DNAH6Q9C0G6 4158 aa2.82□□□□□ -1.96
VPS8-207ENST00000436792 VPS13BQ7Z7G8 4022 aa2.82□□□□□ -1.96
VPS8-207ENST00000436792 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
VPS8-207ENST00000436792 KRTAP19-2Q3LHN2 52 aa2.8□□□□□ -1.96
VPS8-207ENST00000436792 MT1AP04731 61 aa2.78□□□□□ -1.97
VPS8-207ENST00000436792 HYDINQ4G0P3 5121 aa2.77□□□□□ -1.97
VPS8-207ENST00000436792 PKHD1P08F94 4074 aa2.74□□□□□ -1.97
VPS8-207ENST00000436792 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
VPS8-207ENST00000436792 RNF213Q63HN8 5207 aa2.68□□□□□ -1.98
VPS8-207ENST00000436792 KRTAP4-9Q9BYQ8 210 aa2.67□□□□□ -1.98
VPS8-207ENST00000436792 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
VPS8-207ENST00000436792 LCE1EQ5T753 118 aa2.67□□□□□ -1.98
VPS8-207ENST00000436792 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
VPS8-207ENST00000436792 MACF1Q9UPN3 7388 aaKnown RBP2.65□□□□□ -1.98
VPS8-207ENST00000436792 KRTAP4-7Q9BYR0 210 aa2.61□□□□□ -1.99
VPS8-207ENST00000436792 HMCN2Q8NDA2 5059 aa2.61□□□□□ -1.99
VPS8-207ENST00000436792 FSIP2Q5CZC0 6907 aa2.6□□□□□ -1.99
VPS8-207ENST00000436792 NEBP20929 6669 aa2.58□□□□□ -2
VPS8-207ENST00000436792 MUC2Q02817 5179 aa2.55□□□□□ -2
VPS8-207ENST00000436792 KRTAP19-7Q3SYF9 63 aa2.55□□□□□ -2
VPS8-207ENST00000436792 FAT4Q6V0I7 4981 aa2.54□□□□□ -2
VPS8-207ENST00000436792 MUC17Q685J3 4493 aa2.53□□□□□ -2
VPS8-207ENST00000436792 KRTAP9-4Q9BYQ2 154 aa2.52□□□□□ -2.01
VPS8-207ENST00000436792 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
VPS8-207ENST00000436792 LOC100996750A0A140TA64 210 aa2.48□□□□□ -2.01
VPS8-207ENST00000436792 FLGP20930 4061 aaPredicted RBP2.48□□□□□ -2.01
VPS8-207ENST00000436792 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
VPS8-207ENST00000436792 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
VPS8-207ENST00000436792 PRM1P04553 51 aa2.44□□□□□ -2.02
VPS8-207ENST00000436792 TNXBP22105 4242 aa2.42□□□□□ -2.02
VPS8-207ENST00000436792 KRTAP5-9P26371 169 aa2.41□□□□□ -2.02
VPS8-207ENST00000436792 KRTAP6-1Q3LI64 71 aa2.36□□□□□ -2.03
VPS8-207ENST00000436792 SSPOA2VEC9 5147 aa2.27□□□□□ -2.05
VPS8-207ENST00000436792 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
VPS8-207ENST00000436792 LPAP08519 4548 aa2.25□□□□□ -2.05
VPS8-207ENST00000436792 KMT2DO14686 5537 aa2.25□□□□□ -2.05
VPS8-207ENST00000436792 USH2AO75445 5202 aa2.25□□□□□ -2.05
VPS8-207ENST00000436792 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
VPS8-207ENST00000436792 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
VPS8-207ENST00000436792 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
VPS8-207ENST00000436792 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
VPS8-207ENST00000436792 MUC12Q9UKN1 5478 aa2.15□□□□□ -2.07
VPS8-207ENST00000436792 DSTQ03001 7570 aaKnown RBP2.13□□□□□ -2.07
VPS8-207ENST00000436792 KRTAP4-6Q9BYQ5 205 aa2.13□□□□□ -2.07
VPS8-207ENST00000436792 KRTAP4-11Q9BYQ6 195 aa2.12□□□□□ -2.07
VPS8-207ENST00000436792 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
VPS8-207ENST00000436792 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
VPS8-207ENST00000436792 KRTAP5-3Q6L8H2 238 aa2.02□□□□□ -2.09
VPS8-207ENST00000436792 KRTAP4-12Q9BQ66 201 aa1.93□□□□□ -2.1
VPS8-207ENST00000436792 KRTAP4-2Q9BYR5 136 aa1.93□□□□□ -2.1
VPS8-207ENST00000436792 KRTAP9-6A8MVA2 160 aa1.93□□□□□ -2.1
VPS8-207ENST00000436792 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
VPS8-207ENST00000436792 KRTAP5-5Q701N2 237 aaPredicted RBP1.8□□□□□ -2.12
VPS8-207ENST00000436792 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
VPS8-207ENST00000436792 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
VPS8-207ENST00000436792 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
VPS8-207ENST00000436792 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
VPS8-207ENST00000436792 MUC5BQ9HC84 5762 aaPredicted RBP1.7□□□□□ -2.14
VPS8-207ENST00000436792 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
VPS8-207ENST00000436792 KRTAP5-2Q701N4 177 aa1.47□□□□□ -2.17
VPS8-207ENST00000436792 KRTAP5-11Q6L8G4 156 aa1.46□□□□□ -2.18
VPS8-207ENST00000436792 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
VPS8-207ENST00000436792 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
VPS8-207ENST00000436792 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
VPS8-207ENST00000436792 KRTAP5-1Q6L8H4 278 aa1.28□□□□□ -2.21
VPS8-207ENST00000436792 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.17□□□□□ -2.22
VPS8-207ENST00000436792 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms