RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
SCN4A-201ENST00000435607 EPPK1P58107 5090 aaKnown RBP3.3□□□□□ -1.88
SCN4A-201ENST00000435607 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
SCN4A-201ENST00000435607 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
SCN4A-201ENST00000435607 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
SCN4A-201ENST00000435607 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
SCN4A-201ENST00000435607 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
SCN4A-201ENST00000435607 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
SCN4A-201ENST00000435607 MT1AP04731 61 aa3.23□□□□□ -1.89
SCN4A-201ENST00000435607 KRTAP9-7A8MTY7 169 aa3.23□□□□□ -1.89
SCN4A-201ENST00000435607 MUC17Q685J3 4493 aa3.22□□□□□ -1.89
SCN4A-201ENST00000435607 LOC100996750A0A140TA64 210 aa3.21□□□□□ -1.9
SCN4A-201ENST00000435607 LCE4AQ5TA78 99 aa3.18□□□□□ -1.9
SCN4A-201ENST00000435607 MUC2Q02817 5179 aa3.17□□□□□ -1.9
SCN4A-201ENST00000435607 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
SCN4A-201ENST00000435607 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
SCN4A-201ENST00000435607 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
SCN4A-201ENST00000435607 FSIP2Q5CZC0 6907 aa3.13□□□□□ -1.91
SCN4A-201ENST00000435607 BIRC6Q9NR09 4857 aa3.11□□□□□ -1.91
SCN4A-201ENST00000435607 KRTAP19-2Q3LHN2 52 aa3.11□□□□□ -1.91
SCN4A-201ENST00000435607 HERC1Q15751 4861 aa3.1□□□□□ -1.91
SCN4A-201ENST00000435607 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
SCN4A-201ENST00000435607 ABCA13Q86UQ4 5058 aa3.06□□□□□ -1.92
SCN4A-201ENST00000435607 PCLOQ9Y6V0 5065 aa3.05□□□□□ -1.92
SCN4A-201ENST00000435607 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
SCN4A-201ENST00000435607 SYNE2Q8WXH0 6885 aaKnown RBP2.99□□□□□ -1.93
SCN4A-201ENST00000435607 KRTAP4-9Q9BYQ8 210 aa2.99□□□□□ -1.93
SCN4A-201ENST00000435607 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
SCN4A-201ENST00000435607 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
SCN4A-201ENST00000435607 KRTAP19-7Q3SYF9 63 aa2.97□□□□□ -1.93
SCN4A-201ENST00000435607 HMCN2Q8NDA2 5059 aa2.96□□□□□ -1.93
SCN4A-201ENST00000435607 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.96□□□□□ -1.94
SCN4A-201ENST00000435607 LCE2AQ5TA79 106 aaPredicted RBP2.95□□□□□ -1.94
SCN4A-201ENST00000435607 UBR4Q5T4S7 5183 aa2.94□□□□□ -1.94
SCN4A-201ENST00000435607 SYNE1Q8NF91 8797 aaKnown RBP2.89□□□□□ -1.95
SCN4A-201ENST00000435607 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
SCN4A-201ENST00000435607 FAT4Q6V0I7 4981 aa2.88□□□□□ -1.95
SCN4A-201ENST00000435607 RNF213Q63HN8 5207 aa2.77□□□□□ -1.97
SCN4A-201ENST00000435607 KMT2DO14686 5537 aa2.76□□□□□ -1.97
SCN4A-201ENST00000435607 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
SCN4A-201ENST00000435607 KRTAP20-2Q3LI61 65 aa2.54□□□□□ -2
SCN4A-201ENST00000435607 KRTAP9-6A8MVA2 160 aa2.53□□□□□ -2
SCN4A-201ENST00000435607 USH2AO75445 5202 aa2.53□□□□□ -2
SCN4A-201ENST00000435607 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
SCN4A-201ENST00000435607 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
SCN4A-201ENST00000435607 DSTQ03001 7570 aaKnown RBP2.46□□□□□ -2.02
SCN4A-201ENST00000435607 KRTAP4-6Q9BYQ5 205 aa2.38□□□□□ -2.03
SCN4A-201ENST00000435607 KRTAP5-9P26371 169 aa2.37□□□□□ -2.03
SCN4A-201ENST00000435607 FCGBPQ9Y6R7 5405 aaPredicted RBP2.35□□□□□ -2.03
SCN4A-201ENST00000435607 KRTAP4-12Q9BQ66 201 aa2.31□□□□□ -2.04
SCN4A-201ENST00000435607 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
SCN4A-201ENST00000435607 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
SCN4A-201ENST00000435607 NEBP20929 6669 aa2.3□□□□□ -2.04
SCN4A-201ENST00000435607 MUC12Q9UKN1 5478 aa2.3□□□□□ -2.04
SCN4A-201ENST00000435607 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.05
SCN4A-201ENST00000435607 SSPOA2VEC9 5147 aa2.24□□□□□ -2.05
SCN4A-201ENST00000435607 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
SCN4A-201ENST00000435607 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
SCN4A-201ENST00000435607 KRTAP5-5Q701N2 237 aaPredicted RBP2.01□□□□□ -2.09
SCN4A-201ENST00000435607 MDN1Q9NU22 5596 aa1.99□□□□□ -2.09
SCN4A-201ENST00000435607 KRTAP5-3Q6L8H2 238 aa1.97□□□□□ -2.09
SCN4A-201ENST00000435607 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
SCN4A-201ENST00000435607 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
SCN4A-201ENST00000435607 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
SCN4A-201ENST00000435607 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
SCN4A-201ENST00000435607 KRTAP5-10Q6L8G5 202 aa1.58□□□□□ -2.16
SCN4A-201ENST00000435607 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
SCN4A-201ENST00000435607 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.16
SCN4A-201ENST00000435607 HMCN1Q96RW7 5635 aa1.5□□□□□ -2.17
SCN4A-201ENST00000435607 KRTAP5-2Q701N4 177 aa1.48□□□□□ -2.17
SCN4A-201ENST00000435607 KRTAP5-1Q6L8H4 278 aa1.42□□□□□ -2.18
SCN4A-201ENST00000435607 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.18
SCN4A-201ENST00000435607 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
SCN4A-201ENST00000435607 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.2
SCN4A-201ENST00000435607 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
SCN4A-201ENST00000435607 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.2□□□□□ -2.22
SCN4A-201ENST00000435607 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 56.3 ms