RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 SYNE2Q8WXH0 6885 aaKnown RBP2.24□□□□□ -2.05
HDAC9-213ENST00000433709 LINC01554Q52M75 96 aa2.23□□□□□ -2.05
HDAC9-213ENST00000433709 KRTAP8-1Q8IUC2 63 aa2.23□□□□□ -2.05
HDAC9-213ENST00000433709 KRTAP2-3P0C7H8 128 aa2.21□□□□□ -2.06
HDAC9-213ENST00000433709 MT1XP80297 61 aa2.21□□□□□ -2.06
HDAC9-213ENST00000433709 SPRR2FQ96RM1 72 aa2.21□□□□□ -2.06
HDAC9-213ENST00000433709 KRTAP2-4Q9BYR9 128 aa2.21□□□□□ -2.06
HDAC9-213ENST00000433709 PSPHP1O15172 72 aa2.2□□□□□ -2.06
HDAC9-213ENST00000433709 SPRR2EP22531 72 aa2.19□□□□□ -2.06
HDAC9-213ENST00000433709 SPRR2BP35325 72 aa2.19□□□□□ -2.06
HDAC9-213ENST00000433709 SPRR2AP35326 72 aa2.19□□□□□ -2.06
HDAC9-213ENST00000433709 PRO0628Q9UI54 55 aa2.19□□□□□ -2.06
HDAC9-213ENST00000433709 SERP2Q8N6R1 65 aa2.17□□□□□ -2.06
HDAC9-213ENST00000433709 ANAPC13Q9BS18 74 aa2.17□□□□□ -2.06
HDAC9-213ENST00000433709 SERP1Q9Y6X1 66 aa2.17□□□□□ -2.06
HDAC9-213ENST00000433709 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
HDAC9-213ENST00000433709 SNURFQ9Y675 71 aa2.15□□□□□ -2.07
HDAC9-213ENST00000433709 KRTAP2-1Q9BYU5 128 aa2.14□□□□□ -2.07
HDAC9-213ENST00000433709 SPRR2DP22532 72 aa2.12□□□□□ -2.07
HDAC9-213ENST00000433709 NEBP20929 6669 aa2.1□□□□□ -2.07
HDAC9-213ENST00000433709 COA5Q86WW8 74 aa2.1□□□□□ -2.07
HDAC9-213ENST00000433709 A0A1B0GU33 70 aa2.09□□□□□ -2.07
HDAC9-213ENST00000433709 COX7CP15954 63 aa2.09□□□□□ -2.07
HDAC9-213ENST00000433709 PMAIP1Q13794 54 aa2.08□□□□□ -2.08
HDAC9-213ENST00000433709 A0A1B0GU69 56 aa2.05□□□□□ -2.08
HDAC9-213ENST00000433709 KRTAP25-1Q3LHN0 102 aa2.05□□□□□ -2.08
HDAC9-213ENST00000433709 KMT2DO14686 5537 aa2.05□□□□□ -2.08
HDAC9-213ENST00000433709 A0A0D9SG42 100 aa2.04□□□□□ -2.08
HDAC9-213ENST00000433709 KRTAP13-4Q3LI77 160 aa2.04□□□□□ -2.08
HDAC9-213ENST00000433709 PRR15LQ9BU68 103 aa2.04□□□□□ -2.08
HDAC9-213ENST00000433709 A6NED7 52 aa2.03□□□□□ -2.08
HDAC9-213ENST00000433709 H7BZZ5 65 aa2.03□□□□□ -2.08
HDAC9-213ENST00000433709 ATP5EP56381 51 aaPredicted RBP2.03□□□□□ -2.08
HDAC9-213ENST00000433709 SPATA8Q6RVD6 105 aa2.01□□□□□ -2.09
HDAC9-213ENST00000433709 MUC12Q9UKN1 5478 aa2□□□□□ -2.09
HDAC9-213ENST00000433709 TNP1P09430 55 aa2□□□□□ -2.09
HDAC9-213ENST00000433709 MT1GP13640 62 aa1.99□□□□□ -2.09
HDAC9-213ENST00000433709 KRTAP12-1P59990 96 aa1.99□□□□□ -2.09
HDAC9-213ENST00000433709 KRTAP19-3Q7Z4W3 81 aa1.99□□□□□ -2.09
HDAC9-213ENST00000433709 K7ERS5 55 aa1.98□□□□□ -2.09
HDAC9-213ENST00000433709 MT1EP04732 61 aa1.97□□□□□ -2.09
HDAC9-213ENST00000433709 KRTAP19-7Q3SYF9 63 aa1.97□□□□□ -2.09
HDAC9-213ENST00000433709 CYSTM1Q9H1C7 97 aa1.97□□□□□ -2.09
HDAC9-213ENST00000433709 C10orf95Q9H7T3 257 aa1.96□□□□□ -2.1
HDAC9-213ENST00000433709 MDN1Q9NU22 5596 aa1.96□□□□□ -2.1
HDAC9-213ENST00000433709 UQCR11O14957 56 aa1.94□□□□□ -2.1
HDAC9-213ENST00000433709 KRTAP19-5Q3LI72 72 aa1.93□□□□□ -2.1
HDAC9-213ENST00000433709 LINC01558Q9Y6Z2 57 aa1.93□□□□□ -2.1
HDAC9-213ENST00000433709 TMEM258P61165 79 aa1.92□□□□□ -2.1
HDAC9-213ENST00000433709 MT1LQ93083 61 aa1.89□□□□□ -2.11
HDAC9-213ENST00000433709 CCDC179H3BU77 68 aa1.88□□□□□ -2.11
HDAC9-213ENST00000433709 MT1MQ8N339 61 aa1.88□□□□□ -2.11
HDAC9-213ENST00000433709 MIR22HGQ0VDD5 57 aa1.86□□□□□ -2.11
HDAC9-213ENST00000433709 KTN1-AS1Q86SY8 53 aa1.83□□□□□ -2.12
HDAC9-213ENST00000433709 MT4P47944 62 aa1.82□□□□□ -2.12
HDAC9-213ENST00000433709 Q1T7F1 81 aa1.79□□□□□ -2.12
HDAC9-213ENST00000433709 DSTQ03001 7570 aaKnown RBP1.78□□□□□ -2.13
HDAC9-213ENST00000433709 CDC42SE1Q9NRR8 79 aa1.77□□□□□ -2.13
HDAC9-213ENST00000433709 RPS28P62857 69 aaKnown RBP1.76□□□□□ -2.13
HDAC9-213ENST00000433709 BRK1Q8WUW1 75 aa1.75□□□□□ -2.13
HDAC9-213ENST00000433709 KRTAP5-10Q6L8G5 202 aa1.73□□□□□ -2.13
HDAC9-213ENST00000433709 KRTAP20-2Q3LI61 65 aa1.71□□□□□ -2.14
HDAC9-213ENST00000433709 ROMO1P60602 79 aa1.7□□□□□ -2.14
HDAC9-213ENST00000433709 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
HDAC9-213ENST00000433709 GPR98Q8WXG9 6306 aa1.64□□□□□ -2.15
HDAC9-213ENST00000433709 MT1AP04731 61 aa1.63□□□□□ -2.15
HDAC9-213ENST00000433709 KRTAP6-1Q3LI64 71 aa1.56□□□□□ -2.16
HDAC9-213ENST00000433709 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
HDAC9-213ENST00000433709 KRTAP6-2Q3LI66 62 aa1.52□□□□□ -2.17
HDAC9-213ENST00000433709 SYNE1Q8NF91 8797 aaKnown RBP1.47□□□□□ -2.17
HDAC9-213ENST00000433709 INE1O15225 51 aa1.35□□□□□ -2.19
HDAC9-213ENST00000433709 MUC5ACP98088 5654 aa1.34□□□□□ -2.2
HDAC9-213ENST00000433709 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.21
HDAC9-213ENST00000433709 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
HDAC9-213ENST00000433709 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
HDAC9-213ENST00000433709 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
HDAC9-213ENST00000433709 PRM1P04553 51 aa0.82□□□□□ -2.28
HDAC9-213ENST00000433709 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 47.3 ms