RNA–Protein interactions for RNA: ENST00000433419.2

CCDC144CP-202, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

BASIC

Gene CCDC144CP, Length 5,227 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-202ENST00000433419 LCE2AQ5TA79 106 aaPredicted RBP3.58□□□□□ -1.84
CCDC144CP-202ENST00000433419 MT1LQ93083 61 aa3.58□□□□□ -1.84
CCDC144CP-202ENST00000433419 FAT4Q6V0I7 4981 aa3.57□□□□□ -1.84
CCDC144CP-202ENST00000433419 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
CCDC144CP-202ENST00000433419 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
CCDC144CP-202ENST00000433419 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
CCDC144CP-202ENST00000433419 MT1MQ8N339 61 aa3.48□□□□□ -1.85
CCDC144CP-202ENST00000433419 HMCN2Q8NDA2 5059 aa3.46□□□□□ -1.85
CCDC144CP-202ENST00000433419 MT3P25713 68 aa3.44□□□□□ -1.86
CCDC144CP-202ENST00000433419 MT4P47944 62 aa3.44□□□□□ -1.86
CCDC144CP-202ENST00000433419 KRTAP9-7A8MTY7 169 aa3.37□□□□□ -1.87
CCDC144CP-202ENST00000433419 MUC2Q02817 5179 aa3.35□□□□□ -1.87
CCDC144CP-202ENST00000433419 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
CCDC144CP-202ENST00000433419 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
CCDC144CP-202ENST00000433419 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
CCDC144CP-202ENST00000433419 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
CCDC144CP-202ENST00000433419 KRTAP19-7Q3SYF9 63 aa3.29□□□□□ -1.88
CCDC144CP-202ENST00000433419 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
CCDC144CP-202ENST00000433419 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.88
CCDC144CP-202ENST00000433419 MT1AP04731 61 aa3.25□□□□□ -1.89
CCDC144CP-202ENST00000433419 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
CCDC144CP-202ENST00000433419 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
CCDC144CP-202ENST00000433419 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.23□□□□□ -1.89
CCDC144CP-202ENST00000433419 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
CCDC144CP-202ENST00000433419 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
CCDC144CP-202ENST00000433419 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.9
CCDC144CP-202ENST00000433419 KRTAP2-2Q9BYT5 123 aa3.14□□□□□ -1.91
CCDC144CP-202ENST00000433419 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
CCDC144CP-202ENST00000433419 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
CCDC144CP-202ENST00000433419 PRM1P04553 51 aa3.12□□□□□ -1.91
CCDC144CP-202ENST00000433419 LCE5AQ5TCM9 118 aa3.08□□□□□ -1.92
CCDC144CP-202ENST00000433419 KRTAP4-9Q9BYQ8 210 aa3.04□□□□□ -1.92
CCDC144CP-202ENST00000433419 USH2AO75445 5202 aa3.02□□□□□ -1.93
CCDC144CP-202ENST00000433419 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
CCDC144CP-202ENST00000433419 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
CCDC144CP-202ENST00000433419 KRTAP6-1Q3LI64 71 aa2.96□□□□□ -1.93
CCDC144CP-202ENST00000433419 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.93
CCDC144CP-202ENST00000433419 MACF1Q9UPN3 7388 aaKnown RBP2.95□□□□□ -1.94
CCDC144CP-202ENST00000433419 DSTQ03001 7570 aaKnown RBP2.9□□□□□ -1.94
CCDC144CP-202ENST00000433419 FCGBPQ9Y6R7 5405 aaPredicted RBP2.89□□□□□ -1.95
CCDC144CP-202ENST00000433419 KMT2DO14686 5537 aa2.85□□□□□ -1.95
CCDC144CP-202ENST00000433419 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
CCDC144CP-202ENST00000433419 NEBP20929 6669 aa2.8□□□□□ -1.96
CCDC144CP-202ENST00000433419 GPR98Q8WXG9 6306 aa2.79□□□□□ -1.96
CCDC144CP-202ENST00000433419 SSPOA2VEC9 5147 aa2.77□□□□□ -1.97
CCDC144CP-202ENST00000433419 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
CCDC144CP-202ENST00000433419 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
CCDC144CP-202ENST00000433419 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
CCDC144CP-202ENST00000433419 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
CCDC144CP-202ENST00000433419 MDN1Q9NU22 5596 aa2.72□□□□□ -1.97
CCDC144CP-202ENST00000433419 MUC12Q9UKN1 5478 aa2.71□□□□□ -1.98
CCDC144CP-202ENST00000433419 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
CCDC144CP-202ENST00000433419 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
CCDC144CP-202ENST00000433419 KRTAP4-6Q9BYQ5 205 aa2.57□□□□□ -2
CCDC144CP-202ENST00000433419 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
CCDC144CP-202ENST00000433419 KRTAP4-11Q9BYQ6 195 aa2.36□□□□□ -2.03
CCDC144CP-202ENST00000433419 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
CCDC144CP-202ENST00000433419 KRTAP4-12Q9BQ66 201 aa2.22□□□□□ -2.05
CCDC144CP-202ENST00000433419 KRTAP4-2Q9BYR5 136 aa2.22□□□□□ -2.05
CCDC144CP-202ENST00000433419 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
CCDC144CP-202ENST00000433419 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
CCDC144CP-202ENST00000433419 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
CCDC144CP-202ENST00000433419 MUC5ACP98088 5654 aa2.15□□□□□ -2.07
CCDC144CP-202ENST00000433419 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
CCDC144CP-202ENST00000433419 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
CCDC144CP-202ENST00000433419 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
CCDC144CP-202ENST00000433419 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
CCDC144CP-202ENST00000433419 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
CCDC144CP-202ENST00000433419 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
CCDC144CP-202ENST00000433419 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
CCDC144CP-202ENST00000433419 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
CCDC144CP-202ENST00000433419 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
CCDC144CP-202ENST00000433419 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
CCDC144CP-202ENST00000433419 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
CCDC144CP-202ENST00000433419 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.16
CCDC144CP-202ENST00000433419 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
CCDC144CP-202ENST00000433419 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 90.2 ms