RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 SPRR2EP22531 72 aa3.25□□□□□ -1.89
PKNOX1-203ENST00000432907 SPRR2BP35325 72 aa3.25□□□□□ -1.89
PKNOX1-203ENST00000432907 SPRR2AP35326 72 aa3.25□□□□□ -1.89
PKNOX1-203ENST00000432907 KRTAP9-2Q9BYQ4 174 aa3.25□□□□□ -1.89
PKNOX1-203ENST00000432907 MT1EP04732 61 aa3.23□□□□□ -1.89
PKNOX1-203ENST00000432907 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
PKNOX1-203ENST00000432907 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
PKNOX1-203ENST00000432907 KRTAP2-1Q9BYU5 128 aa3.22□□□□□ -1.89
PKNOX1-203ENST00000432907 UBR4Q5T4S7 5183 aa3.2□□□□□ -1.9
PKNOX1-203ENST00000432907 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
PKNOX1-203ENST00000432907 LOC100996750A0A140TA64 210 aa3.18□□□□□ -1.9
PKNOX1-203ENST00000432907 SPRR2DP22532 72 aa3.15□□□□□ -1.9
PKNOX1-203ENST00000432907 MT1MQ8N339 61 aa3.1□□□□□ -1.91
PKNOX1-203ENST00000432907 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
PKNOX1-203ENST00000432907 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
PKNOX1-203ENST00000432907 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
PKNOX1-203ENST00000432907 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
PKNOX1-203ENST00000432907 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
PKNOX1-203ENST00000432907 MT3P25713 68 aa3.04□□□□□ -1.92
PKNOX1-203ENST00000432907 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
PKNOX1-203ENST00000432907 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
PKNOX1-203ENST00000432907 KRTAP6-3Q3LI67 103 aa2.92□□□□□ -1.94
PKNOX1-203ENST00000432907 FSIP2Q5CZC0 6907 aa2.92□□□□□ -1.94
PKNOX1-203ENST00000432907 KRTAP9-7A8MTY7 169 aa2.92□□□□□ -1.94
PKNOX1-203ENST00000432907 MT1AP04731 61 aa2.92□□□□□ -1.94
PKNOX1-203ENST00000432907 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
PKNOX1-203ENST00000432907 LCE1DQ5T752 114 aa2.89□□□□□ -1.95
PKNOX1-203ENST00000432907 LCE1AQ5T7P2 110 aa2.89□□□□□ -1.95
PKNOX1-203ENST00000432907 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.86□□□□□ -1.95
PKNOX1-203ENST00000432907 USH2AO75445 5202 aa2.85□□□□□ -1.95
PKNOX1-203ENST00000432907 KMT2DO14686 5537 aa2.85□□□□□ -1.95
PKNOX1-203ENST00000432907 MT4P47944 62 aa2.81□□□□□ -1.96
PKNOX1-203ENST00000432907 FCGBPQ9Y6R7 5405 aaPredicted RBP2.8□□□□□ -1.96
PKNOX1-203ENST00000432907 LCE5AQ5TCM9 118 aa2.79□□□□□ -1.96
PKNOX1-203ENST00000432907 KRTAP6-1Q3LI64 71 aa2.79□□□□□ -1.96
PKNOX1-203ENST00000432907 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
PKNOX1-203ENST00000432907 SYNE2Q8WXH0 6885 aaKnown RBP2.77□□□□□ -1.97
PKNOX1-203ENST00000432907 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
PKNOX1-203ENST00000432907 KRTAP5-9P26371 169 aa2.68□□□□□ -1.98
PKNOX1-203ENST00000432907 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
PKNOX1-203ENST00000432907 KRTAP9-4Q9BYQ2 154 aa2.65□□□□□ -1.98
PKNOX1-203ENST00000432907 LCE4AQ5TA78 99 aa2.64□□□□□ -1.99
PKNOX1-203ENST00000432907 SSPOA2VEC9 5147 aa2.64□□□□□ -1.99
PKNOX1-203ENST00000432907 MACF1Q9UPN3 7388 aaKnown RBP2.56□□□□□ -2
PKNOX1-203ENST00000432907 NEBP20929 6669 aa2.46□□□□□ -2.02
PKNOX1-203ENST00000432907 KRTAP4-11Q9BYQ6 195 aa2.45□□□□□ -2.02
PKNOX1-203ENST00000432907 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
PKNOX1-203ENST00000432907 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
PKNOX1-203ENST00000432907 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
PKNOX1-203ENST00000432907 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
PKNOX1-203ENST00000432907 MUC12Q9UKN1 5478 aa2.4□□□□□ -2.03
PKNOX1-203ENST00000432907 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
PKNOX1-203ENST00000432907 MDN1Q9NU22 5596 aa2.32□□□□□ -2.04
PKNOX1-203ENST00000432907 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.04
PKNOX1-203ENST00000432907 KRTAP4-6Q9BYQ5 205 aa2.27□□□□□ -2.05
PKNOX1-203ENST00000432907 KRTAP5-4Q6L8H1 288 aa2.23□□□□□ -2.05
PKNOX1-203ENST00000432907 KRTAP9-9Q9BYP9 154 aa2.15□□□□□ -2.06
PKNOX1-203ENST00000432907 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
PKNOX1-203ENST00000432907 KRTAP4-12Q9BQ66 201 aa1.94□□□□□ -2.1
PKNOX1-203ENST00000432907 KRTAP4-2Q9BYR5 136 aa1.94□□□□□ -2.1
PKNOX1-203ENST00000432907 KRTAP5-3Q6L8H2 238 aa1.93□□□□□ -2.1
PKNOX1-203ENST00000432907 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
PKNOX1-203ENST00000432907 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
PKNOX1-203ENST00000432907 HMCN1Q96RW7 5635 aa1.88□□□□□ -2.11
PKNOX1-203ENST00000432907 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
PKNOX1-203ENST00000432907 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
PKNOX1-203ENST00000432907 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
PKNOX1-203ENST00000432907 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
PKNOX1-203ENST00000432907 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
PKNOX1-203ENST00000432907 MUC5BQ9HC84 5762 aaPredicted RBP1.66□□□□□ -2.14
PKNOX1-203ENST00000432907 KRTAP5-1Q6L8H4 278 aa1.66□□□□□ -2.14
PKNOX1-203ENST00000432907 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
PKNOX1-203ENST00000432907 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
PKNOX1-203ENST00000432907 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.53□□□□□ -2.16
PKNOX1-203ENST00000432907 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
PKNOX1-203ENST00000432907 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
PKNOX1-203ENST00000432907 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 10.4 ms