RNA–Protein interactions for RNA: ENST00000431877.6

SSFA2-205, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 5,150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-205ENST00000431877 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
SSFA2-205ENST00000431877 SPRR2DP22532 72 aa5.17□□□□□ -1.58
SSFA2-205ENST00000431877 KRTAP19-6Q3LI70 58 aa5.15□□□□□ -1.58
SSFA2-205ENST00000431877 KRTAP12-4P60329 112 aa5.13□□□□□ -1.59
SSFA2-205ENST00000431877 MT1MQ8N339 61 aa5.02□□□□□ -1.61
SSFA2-205ENST00000431877 KRTAP19-7Q3SYF9 63 aa5.01□□□□□ -1.61
SSFA2-205ENST00000431877 KRTAP9-2Q9BYQ4 174 aa4.98□□□□□ -1.61
SSFA2-205ENST00000431877 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
SSFA2-205ENST00000431877 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
SSFA2-205ENST00000431877 LCE3DQ9BYE3 92 aa4.93□□□□□ -1.62
SSFA2-205ENST00000431877 LCE2DQ5TA82 110 aaPredicted RBP4.91□□□□□ -1.62
SSFA2-205ENST00000431877 LCE3EQ5T5B0 92 aa4.84□□□□□ -1.63
SSFA2-205ENST00000431877 USH2AO75445 5202 aa4.74□□□□□ -1.65
SSFA2-205ENST00000431877 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
SSFA2-205ENST00000431877 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.66
SSFA2-205ENST00000431877 SYNE2Q8WXH0 6885 aaKnown RBP4.65□□□□□ -1.66
SSFA2-205ENST00000431877 FCGBPQ9Y6R7 5405 aaPredicted RBP4.65□□□□□ -1.66
SSFA2-205ENST00000431877 MT4P47944 62 aa4.62□□□□□ -1.67
SSFA2-205ENST00000431877 KRTAP2-3P0C7H8 128 aa4.61□□□□□ -1.67
SSFA2-205ENST00000431877 KRTAP2-4Q9BYR9 128 aa4.61□□□□□ -1.67
SSFA2-205ENST00000431877 KRTAP2-1Q9BYU5 128 aa4.61□□□□□ -1.67
SSFA2-205ENST00000431877 KMT2DO14686 5537 aa4.61□□□□□ -1.67
SSFA2-205ENST00000431877 MT1AP04731 61 aa4.59□□□□□ -1.67
SSFA2-205ENST00000431877 DSTQ03001 7570 aaKnown RBP4.59□□□□□ -1.67
SSFA2-205ENST00000431877 KRTAP9-6A0A140TA67 174 aa4.58□□□□□ -1.68
SSFA2-205ENST00000431877 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
SSFA2-205ENST00000431877 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
SSFA2-205ENST00000431877 PRM1P04553 51 aa4.47□□□□□ -1.69
SSFA2-205ENST00000431877 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
SSFA2-205ENST00000431877 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
SSFA2-205ENST00000431877 KRTAP6-3Q3LI67 103 aa4.4□□□□□ -1.7
SSFA2-205ENST00000431877 SSPOA2VEC9 5147 aa4.36□□□□□ -1.71
SSFA2-205ENST00000431877 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
SSFA2-205ENST00000431877 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.35□□□□□ -1.71
SSFA2-205ENST00000431877 MUC12Q9UKN1 5478 aa4.34□□□□□ -1.72
SSFA2-205ENST00000431877 LCE1DQ5T752 114 aa4.34□□□□□ -1.72
SSFA2-205ENST00000431877 MACF1Q9UPN3 7388 aaKnown RBP4.32□□□□□ -1.72
SSFA2-205ENST00000431877 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
SSFA2-205ENST00000431877 KRTAP6-2Q3LI66 62 aa4.26□□□□□ -1.73
SSFA2-205ENST00000431877 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
SSFA2-205ENST00000431877 KRTAP20-1Q3LI63 56 aa4.18□□□□□ -1.74
SSFA2-205ENST00000431877 LCE4AQ5TA78 99 aa4.08□□□□□ -1.76
SSFA2-205ENST00000431877 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
SSFA2-205ENST00000431877 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
SSFA2-205ENST00000431877 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
SSFA2-205ENST00000431877 NEBP20929 6669 aa3.87□□□□□ -1.79
SSFA2-205ENST00000431877 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
SSFA2-205ENST00000431877 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
SSFA2-205ENST00000431877 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
SSFA2-205ENST00000431877 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
SSFA2-205ENST00000431877 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
SSFA2-205ENST00000431877 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
SSFA2-205ENST00000431877 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
SSFA2-205ENST00000431877 GPR98Q8WXG9 6306 aa3.4□□□□□ -1.86
SSFA2-205ENST00000431877 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
SSFA2-205ENST00000431877 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
SSFA2-205ENST00000431877 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
SSFA2-205ENST00000431877 MUC5ACP98088 5654 aa3.27□□□□□ -1.89
SSFA2-205ENST00000431877 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
SSFA2-205ENST00000431877 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
SSFA2-205ENST00000431877 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
SSFA2-205ENST00000431877 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
SSFA2-205ENST00000431877 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
SSFA2-205ENST00000431877 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
SSFA2-205ENST00000431877 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
SSFA2-205ENST00000431877 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
SSFA2-205ENST00000431877 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
SSFA2-205ENST00000431877 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
SSFA2-205ENST00000431877 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2.01
SSFA2-205ENST00000431877 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
SSFA2-205ENST00000431877 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
SSFA2-205ENST00000431877 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
SSFA2-205ENST00000431877 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
SSFA2-205ENST00000431877 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
SSFA2-205ENST00000431877 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.08
SSFA2-205ENST00000431877 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
SSFA2-205ENST00000431877 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms