RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 SPRR2DP22532 72 aa2.36□□□□□ -2.03
SYNPO2-202ENST00000429713 KRTAP4-7Q9BYR0 210 aa2.36□□□□□ -2.03
SYNPO2-202ENST00000429713 HMCN2Q8NDA2 5059 aa2.35□□□□□ -2.03
SYNPO2-202ENST00000429713 KRTAP19-6Q3LI70 58 aa2.31□□□□□ -2.04
SYNPO2-202ENST00000429713 KRTAP19-3Q7Z4W3 81 aa2.29□□□□□ -2.04
SYNPO2-202ENST00000429713 KIAA1109Q2LD37 5005 aa2.27□□□□□ -2.05
SYNPO2-202ENST00000429713 SYNE2Q8WXH0 6885 aaKnown RBP2.27□□□□□ -2.05
SYNPO2-202ENST00000429713 LOC100996750A0A140TA64 210 aa2.26□□□□□ -2.05
SYNPO2-202ENST00000429713 PRM1P04553 51 aa2.25□□□□□ -2.05
SYNPO2-202ENST00000429713 ABCA13Q86UQ4 5058 aa2.22□□□□□ -2.05
SYNPO2-202ENST00000429713 MT1MQ8N339 61 aa2.21□□□□□ -2.06
SYNPO2-202ENST00000429713 KRTAP19-7Q3SYF9 63 aa2.21□□□□□ -2.06
SYNPO2-202ENST00000429713 KRTAP4-3Q9BYR4 195 aa2.19□□□□□ -2.06
SYNPO2-202ENST00000429713 KRTAP9-7A8MTY7 169 aa2.18□□□□□ -2.06
SYNPO2-202ENST00000429713 KMT2DO14686 5537 aa2.18□□□□□ -2.06
SYNPO2-202ENST00000429713 KRTAP9-6A8MVA2 160 aa2.17□□□□□ -2.06
SYNPO2-202ENST00000429713 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.14□□□□□ -2.07
SYNPO2-202ENST00000429713 LCE1AQ5T7P2 110 aa2.13□□□□□ -2.07
SYNPO2-202ENST00000429713 PCLOQ9Y6V0 5065 aa2.12□□□□□ -2.07
SYNPO2-202ENST00000429713 KRTAP20-1Q3LI63 56 aa2.11□□□□□ -2.07
SYNPO2-202ENST00000429713 KRTAP6-3Q3LI67 103 aa2.11□□□□□ -2.07
SYNPO2-202ENST00000429713 KRTAP4-9Q9BYQ8 210 aa2.09□□□□□ -2.07
SYNPO2-202ENST00000429713 FAT4Q6V0I7 4981 aa2.09□□□□□ -2.08
SYNPO2-202ENST00000429713 KRTAP2-2Q9BYT5 123 aa2.08□□□□□ -2.08
SYNPO2-202ENST00000429713 MT4P47944 62 aa2.06□□□□□ -2.08
SYNPO2-202ENST00000429713 MACF1Q9UPN3 7388 aaKnown RBP2.01□□□□□ -2.09
SYNPO2-202ENST00000429713 LCE4AQ5TA78 99 aa2.01□□□□□ -2.09
SYNPO2-202ENST00000429713 FSIP2Q5CZC0 6907 aa1.99□□□□□ -2.09
SYNPO2-202ENST00000429713 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
SYNPO2-202ENST00000429713 LCE5AQ5TCM9 118 aa1.99□□□□□ -2.09
SYNPO2-202ENST00000429713 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
SYNPO2-202ENST00000429713 KRTAP6-1Q3LI64 71 aa1.98□□□□□ -2.09
SYNPO2-202ENST00000429713 UBR4Q5T4S7 5183 aa1.98□□□□□ -2.09
SYNPO2-202ENST00000429713 RNF213Q63HN8 5207 aa1.93□□□□□ -2.1
SYNPO2-202ENST00000429713 LCE1DQ5T752 114 aa1.91□□□□□ -2.1
SYNPO2-202ENST00000429713 KRTAP9-4Q9BYQ2 154 aa1.91□□□□□ -2.1
SYNPO2-202ENST00000429713 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
SYNPO2-202ENST00000429713 DSTQ03001 7570 aaKnown RBP1.88□□□□□ -2.11
SYNPO2-202ENST00000429713 KRTAP5-9P26371 169 aa1.88□□□□□ -2.11
SYNPO2-202ENST00000429713 FCGBPQ9Y6R7 5405 aaPredicted RBP1.76□□□□□ -2.13
SYNPO2-202ENST00000429713 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
SYNPO2-202ENST00000429713 USH2AO75445 5202 aa1.72□□□□□ -2.13
SYNPO2-202ENST00000429713 SSPOA2VEC9 5147 aa1.72□□□□□ -2.13
SYNPO2-202ENST00000429713 MUC12Q9UKN1 5478 aa1.72□□□□□ -2.13
SYNPO2-202ENST00000429713 NEBP20929 6669 aa1.71□□□□□ -2.14
SYNPO2-202ENST00000429713 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
SYNPO2-202ENST00000429713 KRTAP9-9Q9BYP9 154 aa1.67□□□□□ -2.14
SYNPO2-202ENST00000429713 LCE1EQ5T753 118 aa1.66□□□□□ -2.14
SYNPO2-202ENST00000429713 OBSCNQ5VST9 7968 aa1.65□□□□□ -2.14
SYNPO2-202ENST00000429713 KRTAP4-6Q9BYQ5 205 aa1.65□□□□□ -2.14
SYNPO2-202ENST00000429713 KRTAP4-11Q9BYQ6 195 aa1.62□□□□□ -2.15
SYNPO2-202ENST00000429713 LCE1CQ5T751 118 aa1.6□□□□□ -2.15
SYNPO2-202ENST00000429713 LCE1FQ5T754 118 aa1.6□□□□□ -2.15
SYNPO2-202ENST00000429713 KRTAP20-2Q3LI61 65 aa1.6□□□□□ -2.15
SYNPO2-202ENST00000429713 KRTAP5-4Q6L8H1 288 aa1.6□□□□□ -2.15
SYNPO2-202ENST00000429713 GPR98Q8WXG9 6306 aa1.53□□□□□ -2.16
SYNPO2-202ENST00000429713 KRTAP5-3Q6L8H2 238 aa1.39□□□□□ -2.19
SYNPO2-202ENST00000429713 KRTAP4-4Q9BYR3 166 aa1.38□□□□□ -2.19
SYNPO2-202ENST00000429713 KRTAP5-10Q6L8G5 202 aa1.37□□□□□ -2.19
SYNPO2-202ENST00000429713 AHNAK2Q8IVF2 5795 aa1.33□□□□□ -2.2
SYNPO2-202ENST00000429713 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
SYNPO2-202ENST00000429713 KRTAP5-2Q701N4 177 aa1.29□□□□□ -2.2
SYNPO2-202ENST00000429713 MUC5BQ9HC84 5762 aaPredicted RBP1.29□□□□□ -2.2
SYNPO2-202ENST00000429713 KRTAP4-12Q9BQ66 201 aa1.28□□□□□ -2.2
SYNPO2-202ENST00000429713 KRTAP4-2Q9BYR5 136 aa1.28□□□□□ -2.2
SYNPO2-202ENST00000429713 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.27□□□□□ -2.21
SYNPO2-202ENST00000429713 HMCN1Q96RW7 5635 aa1.27□□□□□ -2.21
SYNPO2-202ENST00000429713 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
SYNPO2-202ENST00000429713 KRTAP5-8O75690 187 aa1.26□□□□□ -2.21
SYNPO2-202ENST00000429713 MUC5ACP98088 5654 aa1.26□□□□□ -2.21
SYNPO2-202ENST00000429713 KRTAP5-1Q6L8H4 278 aa1.24□□□□□ -2.21
SYNPO2-202ENST00000429713 KRTAP5-11Q6L8G4 156 aa1.18□□□□□ -2.22
SYNPO2-202ENST00000429713 KRTAP5-7Q6L8G8 165 aa1.14□□□□□ -2.23
SYNPO2-202ENST00000429713 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
SYNPO2-202ENST00000429713 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.23
SYNPO2-202ENST00000429713 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
SYNPO2-202ENST00000429713 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 199.2 ms