RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 MUC17Q685J3 4493 aa2.18□□□□□ -2.06
LINC00649-203ENST00000427447 KRTAP9-7A8MTY7 169 aa2.18□□□□□ -2.06
LINC00649-203ENST00000427447 KIAA1109Q2LD37 5005 aa2.18□□□□□ -2.06
LINC00649-203ENST00000427447 KRTAP2-2Q9BYT5 123 aa2.15□□□□□ -2.06
LINC00649-203ENST00000427447 LCE1DQ5T752 114 aa2.14□□□□□ -2.07
LINC00649-203ENST00000427447 MT1MQ8N339 61 aa2.14□□□□□ -2.07
LINC00649-203ENST00000427447 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
LINC00649-203ENST00000427447 HERC2O95714 4834 aa2.13□□□□□ -2.07
LINC00649-203ENST00000427447 KMT2CQ8NEZ4 4911 aaKnown RBP2.13□□□□□ -2.07
LINC00649-203ENST00000427447 KRTAP6-2Q3LI66 62 aa2.11□□□□□ -2.07
LINC00649-203ENST00000427447 KRTAP4-7Q9BYR0 210 aa2.09□□□□□ -2.08
LINC00649-203ENST00000427447 LCE4AQ5TA78 99 aa2.07□□□□□ -2.08
LINC00649-203ENST00000427447 LRP2P98164 4655 aa2.06□□□□□ -2.08
LINC00649-203ENST00000427447 ABCA13Q86UQ4 5058 aa2.04□□□□□ -2.08
LINC00649-203ENST00000427447 LOC100996750A0A140TA64 210 aa2.03□□□□□ -2.08
LINC00649-203ENST00000427447 KRTAP19-6Q3LI70 58 aa2.02□□□□□ -2.09
LINC00649-203ENST00000427447 LCE1AQ5T7P2 110 aa2.02□□□□□ -2.09
LINC00649-203ENST00000427447 SYNE2Q8WXH0 6885 aaKnown RBP2.01□□□□□ -2.09
LINC00649-203ENST00000427447 LCE5AQ5TCM9 118 aa2.01□□□□□ -2.09
LINC00649-203ENST00000427447 KRTAP19-2Q3LHN2 52 aa2□□□□□ -2.09
LINC00649-203ENST00000427447 UBR4Q5T4S7 5183 aa1.99□□□□□ -2.09
LINC00649-203ENST00000427447 EPPK1P58107 5090 aaKnown RBP1.97□□□□□ -2.09
LINC00649-203ENST00000427447 RNF213Q63HN8 5207 aa1.96□□□□□ -2.1
LINC00649-203ENST00000427447 KRTAP4-3Q9BYR4 195 aa1.95□□□□□ -2.1
LINC00649-203ENST00000427447 MUC2Q02817 5179 aa1.94□□□□□ -2.1
LINC00649-203ENST00000427447 LCE1EQ5T753 118 aa1.93□□□□□ -2.1
LINC00649-203ENST00000427447 LCE1FQ5T754 118 aa1.91□□□□□ -2.1
LINC00649-203ENST00000427447 LCE1CQ5T751 118 aa1.9□□□□□ -2.11
LINC00649-203ENST00000427447 KRTAP4-9Q9BYQ8 210 aa1.89□□□□□ -2.11
LINC00649-203ENST00000427447 HMCN2Q8NDA2 5059 aa1.88□□□□□ -2.11
LINC00649-203ENST00000427447 KRTAP19-7Q3SYF9 63 aa1.88□□□□□ -2.11
LINC00649-203ENST00000427447 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.88□□□□□ -2.11
LINC00649-203ENST00000427447 KRTAP9-4Q9BYQ2 154 aa1.87□□□□□ -2.11
LINC00649-203ENST00000427447 KRTAP9-6A8MVA2 160 aa1.86□□□□□ -2.11
LINC00649-203ENST00000427447 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
LINC00649-203ENST00000427447 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
LINC00649-203ENST00000427447 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
LINC00649-203ENST00000427447 FAT4Q6V0I7 4981 aa1.8□□□□□ -2.12
LINC00649-203ENST00000427447 KRTAP4-11Q9BYQ6 195 aa1.76□□□□□ -2.13
LINC00649-203ENST00000427447 KRTAP9-9Q9BYP9 154 aa1.74□□□□□ -2.13
LINC00649-203ENST00000427447 USH2AO75445 5202 aa1.69□□□□□ -2.14
LINC00649-203ENST00000427447 FSIP2Q5CZC0 6907 aa1.66□□□□□ -2.14
LINC00649-203ENST00000427447 KRTAP5-9P26371 169 aa1.66□□□□□ -2.14
LINC00649-203ENST00000427447 KMT2DO14686 5537 aa1.65□□□□□ -2.14
LINC00649-203ENST00000427447 SSPOA2VEC9 5147 aa1.62□□□□□ -2.15
LINC00649-203ENST00000427447 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
LINC00649-203ENST00000427447 NEBP20929 6669 aa1.58□□□□□ -2.16
LINC00649-203ENST00000427447 KRTAP4-6Q9BYQ5 205 aa1.57□□□□□ -2.16
LINC00649-203ENST00000427447 KRTAP4-2Q9BYR5 136 aa1.57□□□□□ -2.16
LINC00649-203ENST00000427447 KRTAP20-2Q3LI61 65 aa1.49□□□□□ -2.17
LINC00649-203ENST00000427447 FCGBPQ9Y6R7 5405 aaPredicted RBP1.49□□□□□ -2.17
LINC00649-203ENST00000427447 DSTQ03001 7570 aaKnown RBP1.49□□□□□ -2.17
LINC00649-203ENST00000427447 MDN1Q9NU22 5596 aa1.49□□□□□ -2.17
LINC00649-203ENST00000427447 KRTAP5-5Q701N2 237 aaPredicted RBP1.46□□□□□ -2.18
LINC00649-203ENST00000427447 GPR98Q8WXG9 6306 aa1.44□□□□□ -2.18
LINC00649-203ENST00000427447 KRTAP4-4Q9BYR3 166 aa1.41□□□□□ -2.18
LINC00649-203ENST00000427447 MACF1Q9UPN3 7388 aaKnown RBP1.4□□□□□ -2.19
LINC00649-203ENST00000427447 AHNAK2Q8IVF2 5795 aa1.39□□□□□ -2.19
LINC00649-203ENST00000427447 KRTAP4-12Q9BQ66 201 aa1.38□□□□□ -2.19
LINC00649-203ENST00000427447 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
LINC00649-203ENST00000427447 KRTAP5-4Q6L8H1 288 aa1.36□□□□□ -2.19
LINC00649-203ENST00000427447 HMCN1Q96RW7 5635 aa1.35□□□□□ -2.19
LINC00649-203ENST00000427447 MUC12Q9UKN1 5478 aa1.32□□□□□ -2.2
LINC00649-203ENST00000427447 KRTAP5-3Q6L8H2 238 aa1.29□□□□□ -2.2
LINC00649-203ENST00000427447 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
LINC00649-203ENST00000427447 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
LINC00649-203ENST00000427447 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
LINC00649-203ENST00000427447 KRTAP5-2Q701N4 177 aa1.2□□□□□ -2.22
LINC00649-203ENST00000427447 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
LINC00649-203ENST00000427447 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.22
LINC00649-203ENST00000427447 KRTAP5-8O75690 187 aa1.15□□□□□ -2.23
LINC00649-203ENST00000427447 KRTAP5-7Q6L8G8 165 aa1.07□□□□□ -2.24
LINC00649-203ENST00000427447 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.05□□□□□ -2.24
LINC00649-203ENST00000427447 KRTAP5-11Q6L8G4 156 aa1.01□□□□□ -2.25
LINC00649-203ENST00000427447 KRTAP5-1Q6L8H4 278 aa1□□□□□ -2.25
LINC00649-203ENST00000427447 KRTAP21-2Q3LI59 83 aa0.91□□□□□ -2.26
LINC00649-203ENST00000427447 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 102 ms