RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.41
HCG18-235ENST00000426882 LCE3EQ5T5B0 92 aa6.25□□□□□ -1.41
HCG18-235ENST00000426882 KRTAP19-6Q3LI70 58 aa6.25□□□□□ -1.41
HCG18-235ENST00000426882 MT1MQ8N339 61 aa6.24□□□□□ -1.41
HCG18-235ENST00000426882 LCE2AQ5TA79 106 aaPredicted RBP6.18□□□□□ -1.42
HCG18-235ENST00000426882 KRTAP19-7Q3SYF9 63 aa6.16□□□□□ -1.42
HCG18-235ENST00000426882 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.43
HCG18-235ENST00000426882 KRTAP4-3Q9BYR4 195 aa6.14□□□□□ -1.43
HCG18-235ENST00000426882 MUC2Q02817 5179 aa6.07□□□□□ -1.44
HCG18-235ENST00000426882 MT3P25713 68 aa5.9□□□□□ -1.47
HCG18-235ENST00000426882 KRTAP9-2Q9BYQ4 174 aa5.89□□□□□ -1.47
HCG18-235ENST00000426882 LCE2DQ5TA82 110 aaPredicted RBP5.87□□□□□ -1.47
HCG18-235ENST00000426882 KRTAP2-3P0C7H8 128 aa5.85□□□□□ -1.47
HCG18-235ENST00000426882 KRTAP2-4Q9BYR9 128 aa5.85□□□□□ -1.47
HCG18-235ENST00000426882 KRTAP2-1Q9BYU5 128 aa5.85□□□□□ -1.47
HCG18-235ENST00000426882 PRM1P04553 51 aa5.78□□□□□ -1.48
HCG18-235ENST00000426882 KRTAP9-6A8MVA2 160 aa5.78□□□□□ -1.48
HCG18-235ENST00000426882 MT1AP04731 61 aa5.76□□□□□ -1.49
HCG18-235ENST00000426882 MT4P47944 62 aa5.74□□□□□ -1.49
HCG18-235ENST00000426882 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
HCG18-235ENST00000426882 OBSCNQ5VST9 7968 aa5.66□□□□□ -1.5
HCG18-235ENST00000426882 SYNE2Q8WXH0 6885 aaKnown RBP5.6□□□□□ -1.51
HCG18-235ENST00000426882 FCGBPQ9Y6R7 5405 aaPredicted RBP5.52□□□□□ -1.53
HCG18-235ENST00000426882 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
HCG18-235ENST00000426882 KRTAP6-1Q3LI64 71 aa5.49□□□□□ -1.53
HCG18-235ENST00000426882 LCE1DQ5T752 114 aa5.49□□□□□ -1.53
HCG18-235ENST00000426882 LCE1BQ5T7P3 118 aa5.48□□□□□ -1.53
HCG18-235ENST00000426882 USH2AO75445 5202 aa5.47□□□□□ -1.53
HCG18-235ENST00000426882 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
HCG18-235ENST00000426882 KRTAP9-6A0A140TA67 174 aa5.41□□□□□ -1.54
HCG18-235ENST00000426882 DSTQ03001 7570 aaKnown RBP5.36□□□□□ -1.55
HCG18-235ENST00000426882 KMT2DO14686 5537 aa5.32□□□□□ -1.56
HCG18-235ENST00000426882 KRTAP6-2Q3LI66 62 aa5.32□□□□□ -1.56
HCG18-235ENST00000426882 KRTAP6-3Q3LI67 103 aa5.29□□□□□ -1.56
HCG18-235ENST00000426882 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
HCG18-235ENST00000426882 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
HCG18-235ENST00000426882 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.15□□□□□ -1.59
HCG18-235ENST00000426882 KRTAP20-1Q3LI63 56 aa5.07□□□□□ -1.6
HCG18-235ENST00000426882 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
HCG18-235ENST00000426882 MUC12Q9UKN1 5478 aa5□□□□□ -1.61
HCG18-235ENST00000426882 SSPOA2VEC9 5147 aa4.95□□□□□ -1.62
HCG18-235ENST00000426882 MACF1Q9UPN3 7388 aaKnown RBP4.94□□□□□ -1.62
HCG18-235ENST00000426882 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
HCG18-235ENST00000426882 KRTAP5-9P26371 169 aa4.79□□□□□ -1.64
HCG18-235ENST00000426882 MDN1Q9NU22 5596 aa4.63□□□□□ -1.67
HCG18-235ENST00000426882 NEBP20929 6669 aa4.56□□□□□ -1.68
HCG18-235ENST00000426882 KRTAP4-6Q9BYQ5 205 aa4.53□□□□□ -1.68
HCG18-235ENST00000426882 MUC19Q7Z5P9 8384 aa4.48□□□□□ -1.69
HCG18-235ENST00000426882 LCE1CQ5T751 118 aa4.47□□□□□ -1.69
HCG18-235ENST00000426882 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
HCG18-235ENST00000426882 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
HCG18-235ENST00000426882 KRTAP20-2Q3LI61 65 aa4.43□□□□□ -1.7
HCG18-235ENST00000426882 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
HCG18-235ENST00000426882 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
HCG18-235ENST00000426882 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
HCG18-235ENST00000426882 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
HCG18-235ENST00000426882 GPR98Q8WXG9 6306 aa3.97□□□□□ -1.77
HCG18-235ENST00000426882 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
HCG18-235ENST00000426882 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
HCG18-235ENST00000426882 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
HCG18-235ENST00000426882 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
HCG18-235ENST00000426882 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
HCG18-235ENST00000426882 KRTAP5-3Q6L8H2 238 aa3.56□□□□□ -1.84
HCG18-235ENST00000426882 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
HCG18-235ENST00000426882 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
HCG18-235ENST00000426882 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
HCG18-235ENST00000426882 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
HCG18-235ENST00000426882 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
HCG18-235ENST00000426882 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
HCG18-235ENST00000426882 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
HCG18-235ENST00000426882 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
HCG18-235ENST00000426882 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
HCG18-235ENST00000426882 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
HCG18-235ENST00000426882 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
HCG18-235ENST00000426882 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
HCG18-235ENST00000426882 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
HCG18-235ENST00000426882 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 126.1 ms