RNA–Protein interactions for RNA: ENST00000426467.1

LINC02554-201, Transcript of long intergenic non-protein coding RNA 2554, humanhuman

TSL 1 (best) BASIC

Gene LINC02554, Length 5,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02554-201ENST00000426467 LCE2DQ5TA82 110 aaPredicted RBP3.45□□□□□ -1.86
LINC02554-201ENST00000426467 LCE3BQ5TA77 95 aa3.44□□□□□ -1.86
LINC02554-201ENST00000426467 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
LINC02554-201ENST00000426467 MT1MQ8N339 61 aa3.43□□□□□ -1.86
LINC02554-201ENST00000426467 USH2AO75445 5202 aa3.42□□□□□ -1.86
LINC02554-201ENST00000426467 KRTAP9-2Q9BYQ4 174 aa3.4□□□□□ -1.87
LINC02554-201ENST00000426467 SPRR2DP22532 72 aa3.39□□□□□ -1.87
LINC02554-201ENST00000426467 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
LINC02554-201ENST00000426467 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
LINC02554-201ENST00000426467 LOC100996750A0A140TA64 210 aa3.33□□□□□ -1.88
LINC02554-201ENST00000426467 KMT2DO14686 5537 aa3.29□□□□□ -1.88
LINC02554-201ENST00000426467 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
LINC02554-201ENST00000426467 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
LINC02554-201ENST00000426467 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
LINC02554-201ENST00000426467 DSTQ03001 7570 aaKnown RBP3.24□□□□□ -1.89
LINC02554-201ENST00000426467 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
LINC02554-201ENST00000426467 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
LINC02554-201ENST00000426467 KRTAP2-1Q9BYU5 128 aa3.23□□□□□ -1.89
LINC02554-201ENST00000426467 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
LINC02554-201ENST00000426467 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
LINC02554-201ENST00000426467 LCE5AQ5TCM9 118 aa3.17□□□□□ -1.9
LINC02554-201ENST00000426467 SSPOA2VEC9 5147 aa3.17□□□□□ -1.9
LINC02554-201ENST00000426467 MT3P25713 68 aa3.16□□□□□ -1.9
LINC02554-201ENST00000426467 MT1AP04731 61 aa3.13□□□□□ -1.91
LINC02554-201ENST00000426467 MUC12Q9UKN1 5478 aa3.11□□□□□ -1.91
LINC02554-201ENST00000426467 SYNE2Q8WXH0 6885 aaKnown RBP3.1□□□□□ -1.91
LINC02554-201ENST00000426467 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
LINC02554-201ENST00000426467 KRTAP9-6A0A140TA67 174 aa3.1□□□□□ -1.91
LINC02554-201ENST00000426467 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
LINC02554-201ENST00000426467 MACF1Q9UPN3 7388 aaKnown RBP3.03□□□□□ -1.92
LINC02554-201ENST00000426467 KRTAP4-9Q9BYQ8 210 aa3.03□□□□□ -1.92
LINC02554-201ENST00000426467 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
LINC02554-201ENST00000426467 MT4P47944 62 aa3□□□□□ -1.93
LINC02554-201ENST00000426467 KRTAP9-1A8MXZ3 250 aaPredicted RBP3□□□□□ -1.93
LINC02554-201ENST00000426467 KRTAP9-7A8MTY7 169 aa2.94□□□□□ -1.94
LINC02554-201ENST00000426467 PRM1P04553 51 aa2.91□□□□□ -1.94
LINC02554-201ENST00000426467 KRTAP5-9P26371 169 aa2.9□□□□□ -1.94
LINC02554-201ENST00000426467 KRTAP9-4Q9BYQ2 154 aa2.89□□□□□ -1.95
LINC02554-201ENST00000426467 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
LINC02554-201ENST00000426467 MDN1Q9NU22 5596 aa2.8□□□□□ -1.96
LINC02554-201ENST00000426467 LCE1DQ5T752 114 aa2.79□□□□□ -1.96
LINC02554-201ENST00000426467 LCE4AQ5TA78 99 aa2.77□□□□□ -1.97
LINC02554-201ENST00000426467 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
LINC02554-201ENST00000426467 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
LINC02554-201ENST00000426467 KRTAP2-2Q9BYT5 123 aa2.74□□□□□ -1.97
LINC02554-201ENST00000426467 NEBP20929 6669 aa2.6□□□□□ -1.99
LINC02554-201ENST00000426467 KRTAP4-6Q9BYQ5 205 aa2.58□□□□□ -2
LINC02554-201ENST00000426467 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
LINC02554-201ENST00000426467 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
LINC02554-201ENST00000426467 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
LINC02554-201ENST00000426467 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
LINC02554-201ENST00000426467 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
LINC02554-201ENST00000426467 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
LINC02554-201ENST00000426467 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
LINC02554-201ENST00000426467 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
LINC02554-201ENST00000426467 KRTAP9-9Q9BYP9 154 aa2.24□□□□□ -2.05
LINC02554-201ENST00000426467 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
LINC02554-201ENST00000426467 KRTAP4-11Q9BYQ6 195 aa2.22□□□□□ -2.05
LINC02554-201ENST00000426467 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
LINC02554-201ENST00000426467 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
LINC02554-201ENST00000426467 KRTAP5-3Q6L8H2 238 aa2.11□□□□□ -2.07
LINC02554-201ENST00000426467 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
LINC02554-201ENST00000426467 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
LINC02554-201ENST00000426467 KRTAP4-2Q9BYR5 136 aa2□□□□□ -2.09
LINC02554-201ENST00000426467 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
LINC02554-201ENST00000426467 KRTAP5-10Q6L8G5 202 aa1.94□□□□□ -2.1
LINC02554-201ENST00000426467 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
LINC02554-201ENST00000426467 KRTAP5-1Q6L8H4 278 aa1.86□□□□□ -2.11
LINC02554-201ENST00000426467 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
LINC02554-201ENST00000426467 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
LINC02554-201ENST00000426467 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
LINC02554-201ENST00000426467 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
LINC02554-201ENST00000426467 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
LINC02554-201ENST00000426467 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
LINC02554-201ENST00000426467 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
LINC02554-201ENST00000426467 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
LINC02554-201ENST00000426467 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 67.4 ms