RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
TNC-203ENST00000423613 LCE5AQ5TCM9 118 aa3.38□□□□□ -1.87
TNC-203ENST00000423613 MT1MQ8N339 61 aa3.38□□□□□ -1.87
TNC-203ENST00000423613 TNXBP22105 4242 aa3.35□□□□□ -1.87
TNC-203ENST00000423613 KRTAP19-6Q3LI70 58 aa3.34□□□□□ -1.88
TNC-203ENST00000423613 KMT2CQ8NEZ4 4911 aaKnown RBP3.34□□□□□ -1.88
TNC-203ENST00000423613 MUC17Q685J3 4493 aa3.28□□□□□ -1.88
TNC-203ENST00000423613 FLGP20930 4061 aaPredicted RBP3.27□□□□□ -1.89
TNC-203ENST00000423613 KRTAP4-9Q9BYQ8 210 aa3.27□□□□□ -1.89
TNC-203ENST00000423613 EPPK1P58107 5090 aaKnown RBP3.24□□□□□ -1.89
TNC-203ENST00000423613 KRTAP9-7A8MTY7 169 aa3.22□□□□□ -1.89
TNC-203ENST00000423613 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
TNC-203ENST00000423613 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
TNC-203ENST00000423613 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
TNC-203ENST00000423613 LCE1AQ5T7P2 110 aa3.19□□□□□ -1.9
TNC-203ENST00000423613 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
TNC-203ENST00000423613 ABCA13Q86UQ4 5058 aa3.17□□□□□ -1.9
TNC-203ENST00000423613 MT1AP04731 61 aa3.15□□□□□ -1.91
TNC-203ENST00000423613 SYNE2Q8WXH0 6885 aaKnown RBP3.13□□□□□ -1.91
TNC-203ENST00000423613 KRTAP2-3P0C7H8 128 aa3.13□□□□□ -1.91
TNC-203ENST00000423613 KRTAP2-4Q9BYR9 128 aa3.13□□□□□ -1.91
TNC-203ENST00000423613 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
TNC-203ENST00000423613 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
TNC-203ENST00000423613 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.91
TNC-203ENST00000423613 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
TNC-203ENST00000423613 LCE2AQ5TA79 106 aaPredicted RBP3.06□□□□□ -1.92
TNC-203ENST00000423613 RNF213Q63HN8 5207 aa3.04□□□□□ -1.92
TNC-203ENST00000423613 FAT4Q6V0I7 4981 aa3.04□□□□□ -1.92
TNC-203ENST00000423613 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
TNC-203ENST00000423613 FSIP2Q5CZC0 6907 aa3.03□□□□□ -1.92
TNC-203ENST00000423613 HMCN2Q8NDA2 5059 aa3.03□□□□□ -1.92
TNC-203ENST00000423613 UBR4Q5T4S7 5183 aa3□□□□□ -1.93
TNC-203ENST00000423613 KRTAP2-2Q9BYT5 123 aa2.98□□□□□ -1.93
TNC-203ENST00000423613 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.98□□□□□ -1.93
TNC-203ENST00000423613 KRTAP6-1Q3LI64 71 aa2.96□□□□□ -1.93
TNC-203ENST00000423613 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
TNC-203ENST00000423613 MUC2Q02817 5179 aa2.92□□□□□ -1.94
TNC-203ENST00000423613 KRTAP9-4Q9BYQ2 154 aa2.9□□□□□ -1.95
TNC-203ENST00000423613 OBSCNQ5VST9 7968 aa2.88□□□□□ -1.95
TNC-203ENST00000423613 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.95
TNC-203ENST00000423613 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
TNC-203ENST00000423613 USH2AO75445 5202 aa2.61□□□□□ -1.99
TNC-203ENST00000423613 FCGBPQ9Y6R7 5405 aaPredicted RBP2.58□□□□□ -2
TNC-203ENST00000423613 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
TNC-203ENST00000423613 KMT2DO14686 5537 aa2.51□□□□□ -2.01
TNC-203ENST00000423613 DSTQ03001 7570 aaKnown RBP2.49□□□□□ -2.01
TNC-203ENST00000423613 KRTAP4-6Q9BYQ5 205 aa2.46□□□□□ -2.02
TNC-203ENST00000423613 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
TNC-203ENST00000423613 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
TNC-203ENST00000423613 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
TNC-203ENST00000423613 NEBP20929 6669 aa2.39□□□□□ -2.03
TNC-203ENST00000423613 MACF1Q9UPN3 7388 aaKnown RBP2.37□□□□□ -2.03
TNC-203ENST00000423613 KRTAP5-9P26371 169 aa2.37□□□□□ -2.03
TNC-203ENST00000423613 SSPOA2VEC9 5147 aa2.37□□□□□ -2.03
TNC-203ENST00000423613 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
TNC-203ENST00000423613 MUC12Q9UKN1 5478 aa2.22□□□□□ -2.05
TNC-203ENST00000423613 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
TNC-203ENST00000423613 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
TNC-203ENST00000423613 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
TNC-203ENST00000423613 MDN1Q9NU22 5596 aa2.17□□□□□ -2.06
TNC-203ENST00000423613 KRTAP5-3Q6L8H2 238 aa1.94□□□□□ -2.1
TNC-203ENST00000423613 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
TNC-203ENST00000423613 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
TNC-203ENST00000423613 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
TNC-203ENST00000423613 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
TNC-203ENST00000423613 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
TNC-203ENST00000423613 KRTAP5-10Q6L8G5 202 aa1.74□□□□□ -2.13
TNC-203ENST00000423613 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.13
TNC-203ENST00000423613 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
TNC-203ENST00000423613 MUC5BQ9HC84 5762 aaPredicted RBP1.58□□□□□ -2.16
TNC-203ENST00000423613 KRTAP5-1Q6L8H4 278 aa1.55□□□□□ -2.16
TNC-203ENST00000423613 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
TNC-203ENST00000423613 KRTAP5-11Q6L8G4 156 aa1.51□□□□□ -2.17
TNC-203ENST00000423613 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
TNC-203ENST00000423613 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
TNC-203ENST00000423613 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.28□□□□□ -2.2
TNC-203ENST00000423613 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 77.2 ms