RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 KRTAP19-3Q7Z4W3 81 aa5.62□□□□□ -1.51
TRAPPC10-203ENST00000422875 HMCN2Q8NDA2 5059 aa5.55□□□□□ -1.52
TRAPPC10-203ENST00000422875 SPRR2DP22532 72 aa5.54□□□□□ -1.52
TRAPPC10-203ENST00000422875 FAT4Q6V0I7 4981 aa5.53□□□□□ -1.52
TRAPPC10-203ENST00000422875 LOC100996750A0A140TA64 210 aa5.53□□□□□ -1.52
TRAPPC10-203ENST00000422875 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
TRAPPC10-203ENST00000422875 RNF213Q63HN8 5207 aa5.48□□□□□ -1.53
TRAPPC10-203ENST00000422875 MT1MQ8N339 61 aa5.44□□□□□ -1.54
TRAPPC10-203ENST00000422875 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
TRAPPC10-203ENST00000422875 PRM1P04553 51 aa5.35□□□□□ -1.55
TRAPPC10-203ENST00000422875 FCGBPQ9Y6R7 5405 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC10-203ENST00000422875 KRTAP4-9Q9BYQ8 210 aa5.24□□□□□ -1.57
TRAPPC10-203ENST00000422875 KRTAP2-3P0C7H8 128 aa5.22□□□□□ -1.57
TRAPPC10-203ENST00000422875 KRTAP2-4Q9BYR9 128 aa5.22□□□□□ -1.57
TRAPPC10-203ENST00000422875 KRTAP2-1Q9BYU5 128 aa5.22□□□□□ -1.57
TRAPPC10-203ENST00000422875 KRTAP19-6Q3LI70 58 aa5.22□□□□□ -1.57
TRAPPC10-203ENST00000422875 SYNE2Q8WXH0 6885 aaKnown RBP5.2□□□□□ -1.58
TRAPPC10-203ENST00000422875 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
TRAPPC10-203ENST00000422875 MT3P25713 68 aa5.18□□□□□ -1.58
TRAPPC10-203ENST00000422875 DSTQ03001 7570 aaKnown RBP5.16□□□□□ -1.58
TRAPPC10-203ENST00000422875 LCE2DQ5TA82 110 aaPredicted RBP5.1□□□□□ -1.59
TRAPPC10-203ENST00000422875 LCE2AQ5TA79 106 aaPredicted RBP5.08□□□□□ -1.6
TRAPPC10-203ENST00000422875 MT4P47944 62 aa5.04□□□□□ -1.6
TRAPPC10-203ENST00000422875 USH2AO75445 5202 aa5.04□□□□□ -1.6
TRAPPC10-203ENST00000422875 MT1AP04731 61 aa5.01□□□□□ -1.61
TRAPPC10-203ENST00000422875 KMT2DO14686 5537 aa4.96□□□□□ -1.62
TRAPPC10-203ENST00000422875 LCE1BQ5T7P3 118 aa4.95□□□□□ -1.62
TRAPPC10-203ENST00000422875 LCE1DQ5T752 114 aa4.94□□□□□ -1.62
TRAPPC10-203ENST00000422875 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
TRAPPC10-203ENST00000422875 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.63
TRAPPC10-203ENST00000422875 MACF1Q9UPN3 7388 aaKnown RBP4.75□□□□□ -1.65
TRAPPC10-203ENST00000422875 KRTAP6-2Q3LI66 62 aa4.75□□□□□ -1.65
TRAPPC10-203ENST00000422875 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
TRAPPC10-203ENST00000422875 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
TRAPPC10-203ENST00000422875 KRTAP9-4Q9BYQ2 154 aa4.58□□□□□ -1.68
TRAPPC10-203ENST00000422875 MUC12Q9UKN1 5478 aa4.58□□□□□ -1.68
TRAPPC10-203ENST00000422875 MUC19Q7Z5P9 8384 aa4.58□□□□□ -1.68
TRAPPC10-203ENST00000422875 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
TRAPPC10-203ENST00000422875 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
TRAPPC10-203ENST00000422875 KRTAP9-6A0A140TA67 174 aa4.35□□□□□ -1.71
TRAPPC10-203ENST00000422875 KRTAP6-3Q3LI67 103 aa4.3□□□□□ -1.72
TRAPPC10-203ENST00000422875 MDN1Q9NU22 5596 aa4.29□□□□□ -1.72
TRAPPC10-203ENST00000422875 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
TRAPPC10-203ENST00000422875 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC10-203ENST00000422875 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
TRAPPC10-203ENST00000422875 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
TRAPPC10-203ENST00000422875 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
TRAPPC10-203ENST00000422875 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
TRAPPC10-203ENST00000422875 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
TRAPPC10-203ENST00000422875 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
TRAPPC10-203ENST00000422875 NEBP20929 6669 aa3.93□□□□□ -1.78
TRAPPC10-203ENST00000422875 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
TRAPPC10-203ENST00000422875 KRTAP5-9P26371 169 aa3.88□□□□□ -1.79
TRAPPC10-203ENST00000422875 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC10-203ENST00000422875 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
TRAPPC10-203ENST00000422875 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
TRAPPC10-203ENST00000422875 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
TRAPPC10-203ENST00000422875 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
TRAPPC10-203ENST00000422875 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
TRAPPC10-203ENST00000422875 HMCN1Q96RW7 5635 aa3.52□□□□□ -1.85
TRAPPC10-203ENST00000422875 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
TRAPPC10-203ENST00000422875 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
TRAPPC10-203ENST00000422875 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
TRAPPC10-203ENST00000422875 AHNAK2Q8IVF2 5795 aa3.16□□□□□ -1.9
TRAPPC10-203ENST00000422875 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
TRAPPC10-203ENST00000422875 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
TRAPPC10-203ENST00000422875 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
TRAPPC10-203ENST00000422875 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
TRAPPC10-203ENST00000422875 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
TRAPPC10-203ENST00000422875 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
TRAPPC10-203ENST00000422875 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
TRAPPC10-203ENST00000422875 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
TRAPPC10-203ENST00000422875 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
TRAPPC10-203ENST00000422875 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
TRAPPC10-203ENST00000422875 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
TRAPPC10-203ENST00000422875 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
TRAPPC10-203ENST00000422875 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
TRAPPC10-203ENST00000422875 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms