RNA–Protein interactions for RNA: ENST00000422281.6

CACNA1D-203, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1D, Length 6,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-203ENST00000422281 MT1MQ8N339 61 aa2.8□□□□□ -1.96
CACNA1D-203ENST00000422281 MT3P25713 68 aa2.77□□□□□ -1.97
CACNA1D-203ENST00000422281 LCE2DQ5TA82 110 aaPredicted RBP2.73□□□□□ -1.97
CACNA1D-203ENST00000422281 MT4P47944 62 aa2.72□□□□□ -1.97
CACNA1D-203ENST00000422281 LCE2AQ5TA79 106 aaPredicted RBP2.72□□□□□ -1.97
CACNA1D-203ENST00000422281 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.97
CACNA1D-203ENST00000422281 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.97
CACNA1D-203ENST00000422281 KRTAP2-1Q9BYU5 128 aa2.71□□□□□ -1.97
CACNA1D-203ENST00000422281 HMCN2Q8NDA2 5059 aa2.68□□□□□ -1.98
CACNA1D-203ENST00000422281 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
CACNA1D-203ENST00000422281 KRTAP9-2Q9BYQ4 174 aa2.66□□□□□ -1.98
CACNA1D-203ENST00000422281 KRTAP19-7Q3SYF9 63 aa2.66□□□□□ -1.98
CACNA1D-203ENST00000422281 KRTAP19-6Q3LI70 58 aa2.65□□□□□ -1.99
CACNA1D-203ENST00000422281 LCE1DQ5T752 114 aa2.64□□□□□ -1.99
CACNA1D-203ENST00000422281 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
CACNA1D-203ENST00000422281 RNF213Q63HN8 5207 aa2.63□□□□□ -1.99
CACNA1D-203ENST00000422281 FAT4Q6V0I7 4981 aa2.6□□□□□ -1.99
CACNA1D-203ENST00000422281 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
CACNA1D-203ENST00000422281 KRTAP9-7A8MTY7 169 aa2.58□□□□□ -2
CACNA1D-203ENST00000422281 MT1AP04731 61 aa2.56□□□□□ -2
CACNA1D-203ENST00000422281 KRTAP9-6A0A140TA67 174 aa2.55□□□□□ -2
CACNA1D-203ENST00000422281 SYNE2Q8WXH0 6885 aaKnown RBP2.54□□□□□ -2
CACNA1D-203ENST00000422281 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
CACNA1D-203ENST00000422281 LCE4AQ5TA78 99 aa2.48□□□□□ -2.01
CACNA1D-203ENST00000422281 LCE5AQ5TCM9 118 aa2.44□□□□□ -2.02
CACNA1D-203ENST00000422281 KRTAP9-4Q9BYQ2 154 aa2.42□□□□□ -2.02
CACNA1D-203ENST00000422281 UBR4Q5T4S7 5183 aa2.42□□□□□ -2.02
CACNA1D-203ENST00000422281 KRTAP6-3Q3LI67 103 aa2.4□□□□□ -2.03
CACNA1D-203ENST00000422281 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
CACNA1D-203ENST00000422281 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
CACNA1D-203ENST00000422281 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
CACNA1D-203ENST00000422281 LCE1AQ5T7P2 110 aa2.38□□□□□ -2.03
CACNA1D-203ENST00000422281 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.34□□□□□ -2.03
CACNA1D-203ENST00000422281 MUC2Q02817 5179 aa2.3□□□□□ -2.04
CACNA1D-203ENST00000422281 KRTAP20-1Q3LI63 56 aa2.29□□□□□ -2.04
CACNA1D-203ENST00000422281 KRTAP2-2Q9BYT5 123 aa2.28□□□□□ -2.04
CACNA1D-203ENST00000422281 KMT2DO14686 5537 aa2.26□□□□□ -2.05
CACNA1D-203ENST00000422281 FSIP2Q5CZC0 6907 aa2.26□□□□□ -2.05
CACNA1D-203ENST00000422281 KRTAP4-11Q9BYQ6 195 aa2.21□□□□□ -2.05
CACNA1D-203ENST00000422281 USH2AO75445 5202 aa2.18□□□□□ -2.06
CACNA1D-203ENST00000422281 KRTAP5-9P26371 169 aa2.15□□□□□ -2.07
CACNA1D-203ENST00000422281 SYNE1Q8NF91 8797 aaKnown RBP2.12□□□□□ -2.07
CACNA1D-203ENST00000422281 SSPOA2VEC9 5147 aa2.11□□□□□ -2.07
CACNA1D-203ENST00000422281 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
CACNA1D-203ENST00000422281 NEBP20929 6669 aa2.08□□□□□ -2.08
CACNA1D-203ENST00000422281 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
CACNA1D-203ENST00000422281 FCGBPQ9Y6R7 5405 aaPredicted RBP2□□□□□ -2.09
CACNA1D-203ENST00000422281 MACF1Q9UPN3 7388 aaKnown RBP1.99□□□□□ -2.09
CACNA1D-203ENST00000422281 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
CACNA1D-203ENST00000422281 KRTAP4-6Q9BYQ5 205 aa1.99□□□□□ -2.09
CACNA1D-203ENST00000422281 KRTAP20-2Q3LI61 65 aa1.97□□□□□ -2.09
CACNA1D-203ENST00000422281 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
CACNA1D-203ENST00000422281 KRTAP9-9Q9BYP9 154 aa1.87□□□□□ -2.11
CACNA1D-203ENST00000422281 KRTAP4-12Q9BQ66 201 aa1.87□□□□□ -2.11
CACNA1D-203ENST00000422281 KRTAP4-2Q9BYR5 136 aa1.87□□□□□ -2.11
CACNA1D-203ENST00000422281 KRTAP5-4Q6L8H1 288 aa1.83□□□□□ -2.12
CACNA1D-203ENST00000422281 MUC12Q9UKN1 5478 aa1.79□□□□□ -2.12
CACNA1D-203ENST00000422281 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
CACNA1D-203ENST00000422281 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
CACNA1D-203ENST00000422281 KRTAP5-3Q6L8H2 238 aa1.57□□□□□ -2.16
CACNA1D-203ENST00000422281 KRTAP5-2Q701N4 177 aa1.52□□□□□ -2.17
CACNA1D-203ENST00000422281 KRTAP5-10Q6L8G5 202 aa1.51□□□□□ -2.17
CACNA1D-203ENST00000422281 GPR98Q8WXG9 6306 aa1.45□□□□□ -2.18
CACNA1D-203ENST00000422281 KRTAP5-8O75690 187 aa1.4□□□□□ -2.18
CACNA1D-203ENST00000422281 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
CACNA1D-203ENST00000422281 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
CACNA1D-203ENST00000422281 AHNAK2Q8IVF2 5795 aa1.37□□□□□ -2.19
CACNA1D-203ENST00000422281 KRTAP5-1Q6L8H4 278 aa1.34□□□□□ -2.2
CACNA1D-203ENST00000422281 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
CACNA1D-203ENST00000422281 KRTAP5-7Q6L8G8 165 aa1.28□□□□□ -2.2
CACNA1D-203ENST00000422281 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
CACNA1D-203ENST00000422281 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
CACNA1D-203ENST00000422281 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
CACNA1D-203ENST00000422281 MUC5BQ9HC84 5762 aaPredicted RBP1.24□□□□□ -2.21
CACNA1D-203ENST00000422281 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
CACNA1D-203ENST00000422281 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.2□□□□□ -2.22
CACNA1D-203ENST00000422281 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 168.9 ms