RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 MT1HL1P0DM35 61 aa1.83□□□□□ -2.12
SCG2-202ENST00000421386 FAT3Q8TDW7 4589 aa1.83□□□□□ -2.12
SCG2-202ENST00000421386 FAT1Q14517 4588 aa1.78□□□□□ -2.12
SCG2-202ENST00000421386 KRTAP19-8Q3LI54 63 aa1.77□□□□□ -2.13
SCG2-202ENST00000421386 KRTAP19-5Q3LI72 72 aa1.76□□□□□ -2.13
SCG2-202ENST00000421386 KRTAP4-1Q9BYQ7 146 aa1.75□□□□□ -2.13
SCG2-202ENST00000421386 KRTAP12-4P60329 112 aa1.73□□□□□ -2.13
SCG2-202ENST00000421386 KRTAP6-3Q3LI67 103 aa1.73□□□□□ -2.13
SCG2-202ENST00000421386 MT1XP80297 61 aa1.72□□□□□ -2.13
SCG2-202ENST00000421386 HERC1Q15751 4861 aa1.67□□□□□ -2.14
SCG2-202ENST00000421386 LPAP08519 4548 aa1.66□□□□□ -2.14
SCG2-202ENST00000421386 DNHD1Q96M86 4753 aa1.65□□□□□ -2.15
SCG2-202ENST00000421386 MT1BP07438 61 aa1.64□□□□□ -2.15
SCG2-202ENST00000421386 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
SCG2-202ENST00000421386 MUC17Q685J3 4493 aa1.6□□□□□ -2.15
SCG2-202ENST00000421386 MT1AP04731 61 aa1.6□□□□□ -2.15
SCG2-202ENST00000421386 MT1EP04732 61 aa1.6□□□□□ -2.15
SCG2-202ENST00000421386 LRP2P98164 4655 aa1.6□□□□□ -2.15
SCG2-202ENST00000421386 MT2AP02795 61 aa1.58□□□□□ -2.16
SCG2-202ENST00000421386 MT1FP04733 61 aa1.57□□□□□ -2.16
SCG2-202ENST00000421386 PRM1P04553 51 aa1.56□□□□□ -2.16
SCG2-202ENST00000421386 MT1LQ93083 61 aa1.56□□□□□ -2.16
SCG2-202ENST00000421386 KRTAP19-7Q3SYF9 63 aa1.53□□□□□ -2.16
SCG2-202ENST00000421386 MT1HP80294 61 aa1.49□□□□□ -2.17
SCG2-202ENST00000421386 HYDINQ4G0P3 5121 aa1.48□□□□□ -2.17
SCG2-202ENST00000421386 KMT2CQ8NEZ4 4911 aaKnown RBP1.47□□□□□ -2.17
SCG2-202ENST00000421386 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
SCG2-202ENST00000421386 RYR2Q92736 4967 aa1.43□□□□□ -2.18
SCG2-202ENST00000421386 SPRR2FQ96RM1 72 aa1.43□□□□□ -2.18
SCG2-202ENST00000421386 HMCN2Q8NDA2 5059 aa1.43□□□□□ -2.18
SCG2-202ENST00000421386 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
SCG2-202ENST00000421386 SPRR2AP35326 72 aa1.39□□□□□ -2.19
SCG2-202ENST00000421386 KRTAP21-3Q3LHN1 58 aa1.38□□□□□ -2.19
SCG2-202ENST00000421386 MT1GP13640 62 aa1.37□□□□□ -2.19
SCG2-202ENST00000421386 RYR1P21817 5038 aa1.37□□□□□ -2.19
SCG2-202ENST00000421386 SPRR2BP35325 72 aa1.36□□□□□ -2.19
SCG2-202ENST00000421386 CRCT1Q9UGL9 99 aa1.36□□□□□ -2.19
SCG2-202ENST00000421386 MUC2Q02817 5179 aa1.35□□□□□ -2.19
SCG2-202ENST00000421386 RYR3Q15413 4870 aa1.34□□□□□ -2.19
SCG2-202ENST00000421386 MT1MQ8N339 61 aa1.34□□□□□ -2.19
SCG2-202ENST00000421386 HERC2O95714 4834 aa1.33□□□□□ -2.2
SCG2-202ENST00000421386 SPRR2EP22531 72 aa1.32□□□□□ -2.2
SCG2-202ENST00000421386 SPRR2DP22532 72 aa1.32□□□□□ -2.2
SCG2-202ENST00000421386 KRTAP19-3Q7Z4W3 81 aa1.31□□□□□ -2.2
SCG2-202ENST00000421386 FCGBPQ9Y6R7 5405 aaPredicted RBP1.31□□□□□ -2.2
SCG2-202ENST00000421386 BIRC6Q9NR09 4857 aa1.28□□□□□ -2.2
SCG2-202ENST00000421386 KRTAP6-1Q3LI64 71 aa1.26□□□□□ -2.21
SCG2-202ENST00000421386 SYNE1Q8NF91 8797 aaKnown RBP1.26□□□□□ -2.21
SCG2-202ENST00000421386 PCLOQ9Y6V0 5065 aa1.24□□□□□ -2.21
SCG2-202ENST00000421386 UBR4Q5T4S7 5183 aa1.22□□□□□ -2.21
SCG2-202ENST00000421386 ABCA13Q86UQ4 5058 aa1.2□□□□□ -2.22
SCG2-202ENST00000421386 KIAA1109Q2LD37 5005 aa1.18□□□□□ -2.22
SCG2-202ENST00000421386 EPPK1P58107 5090 aaKnown RBP1.12□□□□□ -2.23
SCG2-202ENST00000421386 KRTAP19-6Q3LI70 58 aa1.12□□□□□ -2.23
SCG2-202ENST00000421386 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
SCG2-202ENST00000421386 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
SCG2-202ENST00000421386 FAT4Q6V0I7 4981 aa1.03□□□□□ -2.25
SCG2-202ENST00000421386 SSPOA2VEC9 5147 aa1□□□□□ -2.25
SCG2-202ENST00000421386 USH2AO75445 5202 aa0.99□□□□□ -2.25
SCG2-202ENST00000421386 KMT2DO14686 5537 aa0.97□□□□□ -2.25
SCG2-202ENST00000421386 RNF213Q63HN8 5207 aa0.97□□□□□ -2.25
SCG2-202ENST00000421386 MDN1Q9NU22 5596 aa0.8□□□□□ -2.28
SCG2-202ENST00000421386 MUC5ACP98088 5654 aa0.79□□□□□ -2.28
SCG2-202ENST00000421386 MUC5BQ9HC84 5762 aaPredicted RBP0.78□□□□□ -2.29
SCG2-202ENST00000421386 KRTAP20-2Q3LI61 65 aa0.75□□□□□ -2.29
SCG2-202ENST00000421386 MUC12Q9UKN1 5478 aa0.75□□□□□ -2.29
SCG2-202ENST00000421386 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
SCG2-202ENST00000421386 AHNAKQ09666 5890 aaKnown RBP0.74□□□□□ -2.29
SCG2-202ENST00000421386 DSTQ03001 7570 aaKnown RBP0.71□□□□□ -2.3
SCG2-202ENST00000421386 AHNAK2Q8IVF2 5795 aa0.7□□□□□ -2.3
SCG2-202ENST00000421386 FSIP2Q5CZC0 6907 aa0.66□□□□□ -2.3
SCG2-202ENST00000421386 KRTAP20-1Q3LI63 56 aa0.64□□□□□ -2.31
SCG2-202ENST00000421386 NEBP20929 6669 aa0.64□□□□□ -2.31
SCG2-202ENST00000421386 SYNE2Q8WXH0 6885 aaKnown RBP0.62□□□□□ -2.31
SCG2-202ENST00000421386 GPR98Q8WXG9 6306 aa0.62□□□□□ -2.31
SCG2-202ENST00000421386 MT4P47944 62 aa0.59□□□□□ -2.31
SCG2-202ENST00000421386 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
SCG2-202ENST00000421386 MACF1Q9UPN3 7388 aaKnown RBP0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 41.2 ms