RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 AEBP2Q6ZN18 517 aaPredicted RBP21.08■□□□□ 0.97
SCG2-202ENST00000421386 CHIC1Q5VXU3 224 aa19.79■□□□□ 0.76
SCG2-202ENST00000421386 SENP3Q9H4L4 574 aaPredicted RBP17.79■□□□□ 0.44
SCG2-202ENST00000421386 PHF23Q9BUL5 403 aaPredicted RBP17.63■□□□□ 0.41
SCG2-202ENST00000421386 FOXD1Q16676 465 aa16.73■□□□□ 0.27
SCG2-202ENST00000421386 PLPPR3Q6T4P5 718 aa15.68■□□□□ 0.1
SCG2-202ENST00000421386 PPP6R1Q9UPN7 881 aa15.63■□□□□ 0.09
SCG2-202ENST00000421386 ADRA2BP18089 450 aa15.54■□□□□ 0.08
SCG2-202ENST00000421386 PIAS4Q8N2W9 510 aaPredicted RBP15.54■□□□□ 0.08
SCG2-202ENST00000421386 MSH5O43196 834 aa15.53■□□□□ 0.08
SCG2-202ENST00000421386 POTEDQ86YR6 584 aa15.49■□□□□ 0.07
SCG2-202ENST00000421386 MAPK8IP2Q13387 824 aaPredicted RBP14.34□□□□□ -0.11
SCG2-202ENST00000421386 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
SCG2-202ENST00000421386 SCAF1Q9H7N4 1312 aaKnown RBP13.97□□□□□ -0.17
SCG2-202ENST00000421386 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
SCG2-202ENST00000421386 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
SCG2-202ENST00000421386 DCAF8L1A6NGE4 600 aa13.55□□□□□ -0.24
SCG2-202ENST00000421386 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
SCG2-202ENST00000421386 CACNB1Q02641 598 aaPredicted RBP13.44□□□□□ -0.26
SCG2-202ENST00000421386 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
SCG2-202ENST00000421386 RNF39Q9H2S5 420 aa13.34□□□□□ -0.27
SCG2-202ENST00000421386 NPM3O75607 178 aaKnown RBP13.09□□□□□ -0.31
SCG2-202ENST00000421386 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
SCG2-202ENST00000421386 C1QBPQ07021 282 aaKnown RBP13.04□□□□□ -0.32
SCG2-202ENST00000421386 DNAJC5BQ9UF47 199 aa13.02□□□□□ -0.33
SCG2-202ENST00000421386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.89□□□□□ -0.35
SCG2-202ENST00000421386 KCNA4P22459 653 aa12.79□□□□□ -0.36
SCG2-202ENST00000421386 U3KPZ7 1027 aaPredicted RBP12.72□□□□□ -0.37
SCG2-202ENST00000421386 SPINK5Q9NQ38 1064 aaPredicted RBP12.6□□□□□ -0.39
SCG2-202ENST00000421386 SLC4A2P04920 1241 aa12.57□□□□□ -0.4
SCG2-202ENST00000421386 DSG3P32926 999 aa12.47□□□□□ -0.41
SCG2-202ENST00000421386 CAPN15O75808 1086 aa12.46□□□□□ -0.41
SCG2-202ENST00000421386 TRHP20396 242 aaPredicted RBP12.28□□□□□ -0.44
SCG2-202ENST00000421386 ABCB7O75027 752 aa12.26□□□□□ -0.45
SCG2-202ENST00000421386 ZNF219Q9P2Y4 722 aaPredicted RBP12.14□□□□□ -0.47
SCG2-202ENST00000421386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.09□□□□□ -0.47
SCG2-202ENST00000421386 HNRNPUL2Q1KMD3 747 aaKnown RBP12.09□□□□□ -0.47
SCG2-202ENST00000421386 APLP2Q06481 763 aa12.08□□□□□ -0.48
SCG2-202ENST00000421386 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
SCG2-202ENST00000421386 POTEHQ6S545 545 aa12.07□□□□□ -0.48
SCG2-202ENST00000421386 MYCNP04198 464 aaPredicted RBP12.01□□□□□ -0.49
SCG2-202ENST00000421386 SLC4A1APQ9BWU0 796 aaKnown RBP11.95□□□□□ -0.5
SCG2-202ENST00000421386 ATF5Q9Y2D1 282 aaPredicted RBP11.94□□□□□ -0.5
SCG2-202ENST00000421386 POLA2Q14181 598 aa11.92□□□□□ -0.5
SCG2-202ENST00000421386 FOXD4L1Q9NU39 408 aa11.85□□□□□ -0.51
SCG2-202ENST00000421386 ZBTB22O15209 634 aa11.83□□□□□ -0.52
SCG2-202ENST00000421386 RBM42Q9BTD8 480 aaKnown RBP11.75□□□□□ -0.53
SCG2-202ENST00000421386 CHRDL2Q6WN34 429 aa11.64□□□□□ -0.55
SCG2-202ENST00000421386 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
SCG2-202ENST00000421386 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
SCG2-202ENST00000421386 ZBTB12Q9Y330 459 aaPredicted RBP11.51□□□□□ -0.57
SCG2-202ENST00000421386 REM2Q8IYK8 340 aaPredicted RBP11.48□□□□□ -0.57
SCG2-202ENST00000421386 ATXN8OSP0DMR3 200 aa11.43□□□□□ -0.58
SCG2-202ENST00000421386 PIP4P2Q8N4L2 257 aa11.4□□□□□ -0.58
SCG2-202ENST00000421386 PITPNM1O00562 1244 aa11.39□□□□□ -0.59
SCG2-202ENST00000421386 MKRN4PQ13434 485 aaPredicted RBP11.35□□□□□ -0.59
SCG2-202ENST00000421386 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.61
SCG2-202ENST00000421386 SP7Q8TDD2 431 aaPredicted RBP11.25□□□□□ -0.61
SCG2-202ENST00000421386 FBLN2P98095 1184 aa11.23□□□□□ -0.61
SCG2-202ENST00000421386 SPDYE2BA6NHP3 402 aa11.22□□□□□ -0.61
SCG2-202ENST00000421386 SPDYE6P0CI01 402 aa11.22□□□□□ -0.61
SCG2-202ENST00000421386 SPDYE2Q495Y8 402 aa11.22□□□□□ -0.61
SCG2-202ENST00000421386 EVX2Q03828 476 aa11.18□□□□□ -0.62
SCG2-202ENST00000421386 HAX1O00165 279 aa11.15□□□□□ -0.62
SCG2-202ENST00000421386 SSUH2Q9Y2M2 353 aa11.14□□□□□ -0.63
SCG2-202ENST00000421386 CSRNP3Q8WYN3 585 aa11.12□□□□□ -0.63
SCG2-202ENST00000421386 ZNF692Q9BU19 519 aaPredicted RBP11.1□□□□□ -0.63
SCG2-202ENST00000421386 CLEC11AQ9Y240 323 aa11.09□□□□□ -0.63
SCG2-202ENST00000421386 PRKAR2AP13861 404 aaKnown RBP11.05□□□□□ -0.64
SCG2-202ENST00000421386 SPDYE1Q8NFV5 336 aaPredicted RBP11.04□□□□□ -0.64
SCG2-202ENST00000421386 CHADLQ6NUI6 762 aa10.99□□□□□ -0.65
SCG2-202ENST00000421386 PABPN1Q86U42 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
SCG2-202ENST00000421386 C19orf67A6NJJ6 358 aa10.92□□□□□ -0.66
SCG2-202ENST00000421386 EHMT2Q96KQ7 1210 aa10.9□□□□□ -0.66
SCG2-202ENST00000421386 PRR29P0C7W0 189 aa10.85□□□□□ -0.67
SCG2-202ENST00000421386 GABBR2O75899 941 aa10.8□□□□□ -0.68
SCG2-202ENST00000421386 FARP1Q9Y4F1 1045 aaPredicted RBP10.72□□□□□ -0.69
SCG2-202ENST00000421386 CD44P16070 742 aaKnown RBP10.68□□□□□ -0.7
SCG2-202ENST00000421386 POTEIP0CG38 1075 aa10.66□□□□□ -0.7
SCG2-202ENST00000421386 CREBZFQ9NS37 354 aa10.66□□□□□ -0.7
SCG2-202ENST00000421386 SPDYE4A6NLX3 237 aa10.64□□□□□ -0.71
SCG2-202ENST00000421386 LHX8Q68G74 356 aa10.55□□□□□ -0.72
SCG2-202ENST00000421386 ZRANB1Q9UGI0 708 aa10.52□□□□□ -0.73
SCG2-202ENST00000421386 ZNF579Q8NAF0 562 aaKnown RBP10.51□□□□□ -0.73
SCG2-202ENST00000421386 MNX1P50219 401 aaPredicted RBP10.5□□□□□ -0.73
SCG2-202ENST00000421386 STAG3Q9UJ98 1225 aa10.5□□□□□ -0.73
SCG2-202ENST00000421386 GALR2O43603 387 aaPredicted RBP10.47□□□□□ -0.73
SCG2-202ENST00000421386 PHF12Q96QT6 1004 aa10.45□□□□□ -0.74
SCG2-202ENST00000421386 PROM2Q8N271 834 aa10.41□□□□□ -0.74
SCG2-202ENST00000421386 DCBLD2Q96PD2 775 aa10.39□□□□□ -0.75
SCG2-202ENST00000421386 CLCN6P51797 869 aa10.37□□□□□ -0.75
SCG2-202ENST00000421386 POTEB2H3BUK9 544 aa10.32□□□□□ -0.76
SCG2-202ENST00000421386 PELP1Q8IZL8 1130 aaKnown RBP10.32□□□□□ -0.76
SCG2-202ENST00000421386 NPM1P06748 294 aaKnown RBP eCLIP10.29□□□□□ -0.76
SCG2-202ENST00000421386 PAK3O75914 559 aaPredicted RBP10.28□□□□□ -0.76
SCG2-202ENST00000421386 MS4A3Q96HJ5 214 aa10.28□□□□□ -0.76
SCG2-202ENST00000421386 OTUD5Q96G74 571 aa10.24□□□□□ -0.77
SCG2-202ENST00000421386 TSPYL2Q9H2G4 693 aaPredicted RBP10.23□□□□□ -0.77
SCG2-202ENST00000421386 CCDC61Q9Y6R9 512 aa10.21□□□□□ -0.77
SCG2-202ENST00000421386 ATMINO43313 823 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms