RNA–Protein interactions for RNA: ENST00000420881.6

PCDH19-203, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 7,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-203ENST00000420881 KRTAP6-2Q3LI66 62 aa2.56□□□□□ -2
PCDH19-203ENST00000420881 BIRC6Q9NR09 4857 aa2.56□□□□□ -2
PCDH19-203ENST00000420881 RYR3Q15413 4870 aa2.53□□□□□ -2
PCDH19-203ENST00000420881 KRTAP4-9Q9BYQ8 210 aa2.49□□□□□ -2.01
PCDH19-203ENST00000420881 LCE1AQ5T7P2 110 aa2.46□□□□□ -2.02
PCDH19-203ENST00000420881 KRTAP4-3Q9BYR4 195 aa2.46□□□□□ -2.02
PCDH19-203ENST00000420881 LPAP08519 4548 aa2.45□□□□□ -2.02
PCDH19-203ENST00000420881 KRTAP19-2Q3LHN2 52 aa2.45□□□□□ -2.02
PCDH19-203ENST00000420881 LRP2P98164 4655 aa2.45□□□□□ -2.02
PCDH19-203ENST00000420881 HERC1Q15751 4861 aa2.45□□□□□ -2.02
PCDH19-203ENST00000420881 SYNE1Q8NF91 8797 aaKnown RBP2.44□□□□□ -2.02
PCDH19-203ENST00000420881 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
PCDH19-203ENST00000420881 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
PCDH19-203ENST00000420881 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
PCDH19-203ENST00000420881 KIAA1109Q2LD37 5005 aa2.42□□□□□ -2.02
PCDH19-203ENST00000420881 FSIP2Q5CZC0 6907 aa2.41□□□□□ -2.02
PCDH19-203ENST00000420881 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.4□□□□□ -2.02
PCDH19-203ENST00000420881 KRTAP6-3Q3LI67 103 aa2.4□□□□□ -2.03
PCDH19-203ENST00000420881 KRTAP2-2Q9BYT5 123 aa2.4□□□□□ -2.03
PCDH19-203ENST00000420881 HYDINQ4G0P3 5121 aa2.38□□□□□ -2.03
PCDH19-203ENST00000420881 PCLOQ9Y6V0 5065 aa2.37□□□□□ -2.03
PCDH19-203ENST00000420881 LCE4AQ5TA78 99 aa2.37□□□□□ -2.03
PCDH19-203ENST00000420881 SYNE2Q8WXH0 6885 aaKnown RBP2.36□□□□□ -2.03
PCDH19-203ENST00000420881 LCE2AQ5TA79 106 aaPredicted RBP2.36□□□□□ -2.03
PCDH19-203ENST00000420881 HERC2O95714 4834 aa2.36□□□□□ -2.03
PCDH19-203ENST00000420881 KRTAP9-4Q9BYQ2 154 aa2.36□□□□□ -2.03
PCDH19-203ENST00000420881 KRTAP19-7Q3SYF9 63 aa2.35□□□□□ -2.03
PCDH19-203ENST00000420881 MUC17Q685J3 4493 aa2.34□□□□□ -2.03
PCDH19-203ENST00000420881 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.04
PCDH19-203ENST00000420881 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
PCDH19-203ENST00000420881 EPPK1P58107 5090 aaKnown RBP2.28□□□□□ -2.04
PCDH19-203ENST00000420881 KMT2CQ8NEZ4 4911 aaKnown RBP2.26□□□□□ -2.05
PCDH19-203ENST00000420881 ABCA13Q86UQ4 5058 aa2.26□□□□□ -2.05
PCDH19-203ENST00000420881 KRTAP4-11Q9BYQ6 195 aa2.16□□□□□ -2.06
PCDH19-203ENST00000420881 KRTAP9-9Q9BYP9 154 aa2.14□□□□□ -2.07
PCDH19-203ENST00000420881 HMCN2Q8NDA2 5059 aa2.13□□□□□ -2.07
PCDH19-203ENST00000420881 RNF213Q63HN8 5207 aa2.09□□□□□ -2.07
PCDH19-203ENST00000420881 MUC2Q02817 5179 aa2.08□□□□□ -2.08
PCDH19-203ENST00000420881 FAT4Q6V0I7 4981 aa2.01□□□□□ -2.09
PCDH19-203ENST00000420881 OBSCNQ5VST9 7968 aa2.01□□□□□ -2.09
PCDH19-203ENST00000420881 UBR4Q5T4S7 5183 aa1.99□□□□□ -2.09
PCDH19-203ENST00000420881 MACF1Q9UPN3 7388 aaKnown RBP1.99□□□□□ -2.09
PCDH19-203ENST00000420881 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
PCDH19-203ENST00000420881 DSTQ03001 7570 aaKnown RBP1.96□□□□□ -2.1
PCDH19-203ENST00000420881 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
PCDH19-203ENST00000420881 KRTAP5-9P26371 169 aa1.92□□□□□ -2.1
PCDH19-203ENST00000420881 NEBP20929 6669 aa1.9□□□□□ -2.11
PCDH19-203ENST00000420881 KRTAP4-6Q9BYQ5 205 aa1.84□□□□□ -2.11
PCDH19-203ENST00000420881 KRTAP4-12Q9BQ66 201 aa1.81□□□□□ -2.12
PCDH19-203ENST00000420881 KRTAP4-2Q9BYR5 136 aa1.81□□□□□ -2.12
PCDH19-203ENST00000420881 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
PCDH19-203ENST00000420881 GPR98Q8WXG9 6306 aa1.77□□□□□ -2.13
PCDH19-203ENST00000420881 USH2AO75445 5202 aa1.73□□□□□ -2.13
PCDH19-203ENST00000420881 KRTAP5-4Q6L8H1 288 aa1.73□□□□□ -2.13
PCDH19-203ENST00000420881 SSPOA2VEC9 5147 aa1.73□□□□□ -2.13
PCDH19-203ENST00000420881 KMT2DO14686 5537 aa1.71□□□□□ -2.14
PCDH19-203ENST00000420881 FCGBPQ9Y6R7 5405 aaPredicted RBP1.7□□□□□ -2.14
PCDH19-203ENST00000420881 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
PCDH19-203ENST00000420881 MDN1Q9NU22 5596 aa1.67□□□□□ -2.14
PCDH19-203ENST00000420881 KRTAP5-3Q6L8H2 238 aa1.57□□□□□ -2.16
PCDH19-203ENST00000420881 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
PCDH19-203ENST00000420881 MUC5ACP98088 5654 aa1.49□□□□□ -2.17
PCDH19-203ENST00000420881 MUC12Q9UKN1 5478 aa1.42□□□□□ -2.18
PCDH19-203ENST00000420881 HMCN1Q96RW7 5635 aa1.42□□□□□ -2.18
PCDH19-203ENST00000420881 KRTAP5-10Q6L8G5 202 aa1.4□□□□□ -2.19
PCDH19-203ENST00000420881 KRTAP5-8O75690 187 aa1.39□□□□□ -2.19
PCDH19-203ENST00000420881 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
PCDH19-203ENST00000420881 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.19
PCDH19-203ENST00000420881 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.2
PCDH19-203ENST00000420881 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
PCDH19-203ENST00000420881 KRTAP5-11Q6L8G4 156 aa1.24□□□□□ -2.21
PCDH19-203ENST00000420881 KRTAP5-7Q6L8G8 165 aa1.2□□□□□ -2.22
PCDH19-203ENST00000420881 AHNAKQ09666 5890 aaKnown RBP1.18□□□□□ -2.22
PCDH19-203ENST00000420881 KRTAP5-1Q6L8H4 278 aa1.18□□□□□ -2.22
PCDH19-203ENST00000420881 KRTAP21-2Q3LI59 83 aa1.1□□□□□ -2.23
PCDH19-203ENST00000420881 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.1□□□□□ -2.23
PCDH19-203ENST00000420881 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 152 ms