RNA–Protein interactions for RNA: ENST00000417876.1

RFC4-204, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-204ENST00000417876 KMT2CQ8NEZ4 4911 aaKnown RBP1.94□□□□□ -2.1
RFC4-204ENST00000417876 LPAP08519 4548 aa1.92□□□□□ -2.1
RFC4-204ENST00000417876 LRP2P98164 4655 aa1.91□□□□□ -2.1
RFC4-204ENST00000417876 MUC17Q685J3 4493 aa1.9□□□□□ -2.11
RFC4-204ENST00000417876 Q5VSD8 79 aa1.88□□□□□ -2.11
RFC4-204ENST00000417876 KRTAP4-1Q9BYQ7 146 aa1.88□□□□□ -2.11
RFC4-204ENST00000417876 FLGP20930 4061 aaPredicted RBP1.88□□□□□ -2.11
RFC4-204ENST00000417876 RYR3Q15413 4870 aa1.88□□□□□ -2.11
RFC4-204ENST00000417876 INE1O15225 51 aa1.85□□□□□ -2.11
RFC4-204ENST00000417876 TNP1P09430 55 aa1.85□□□□□ -2.11
RFC4-204ENST00000417876 KIAA1109Q2LD37 5005 aa1.82□□□□□ -2.12
RFC4-204ENST00000417876 ABCA13Q86UQ4 5058 aa1.79□□□□□ -2.12
RFC4-204ENST00000417876 KRTAP21-3Q3LHN1 58 aa1.79□□□□□ -2.12
RFC4-204ENST00000417876 KRTAP8-1Q8IUC2 63 aa1.79□□□□□ -2.12
RFC4-204ENST00000417876 SPRR2GQ9BYE4 73 aa1.77□□□□□ -2.13
RFC4-204ENST00000417876 BIRC6Q9NR09 4857 aa1.76□□□□□ -2.13
RFC4-204ENST00000417876 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
RFC4-204ENST00000417876 HERC2O95714 4834 aa1.71□□□□□ -2.14
RFC4-204ENST00000417876 KRTAP19-8Q3LI54 63 aa1.7□□□□□ -2.14
RFC4-204ENST00000417876 EPPK1P58107 5090 aaKnown RBP1.68□□□□□ -2.14
RFC4-204ENST00000417876 MT1XP80297 61 aa1.67□□□□□ -2.14
RFC4-204ENST00000417876 PCLOQ9Y6V0 5065 aa1.66□□□□□ -2.14
RFC4-204ENST00000417876 MT1BP07438 61 aa1.66□□□□□ -2.14
RFC4-204ENST00000417876 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
RFC4-204ENST00000417876 MT2AP02795 61 aa1.64□□□□□ -2.15
RFC4-204ENST00000417876 MT1FP04733 61 aa1.64□□□□□ -2.15
RFC4-204ENST00000417876 KRTAP2-3P0C7H8 128 aa1.63□□□□□ -2.15
RFC4-204ENST00000417876 KRTAP2-4Q9BYR9 128 aa1.63□□□□□ -2.15
RFC4-204ENST00000417876 KRTAP2-1Q9BYU5 128 aa1.63□□□□□ -2.15
RFC4-204ENST00000417876 HMCN2Q8NDA2 5059 aa1.63□□□□□ -2.15
RFC4-204ENST00000417876 UBR4Q5T4S7 5183 aa1.61□□□□□ -2.15
RFC4-204ENST00000417876 MT1HP80294 61 aa1.61□□□□□ -2.15
RFC4-204ENST00000417876 KRTAP19-5Q3LI72 72 aa1.57□□□□□ -2.16
RFC4-204ENST00000417876 MUC2Q02817 5179 aa1.57□□□□□ -2.16
RFC4-204ENST00000417876 RNF213Q63HN8 5207 aa1.55□□□□□ -2.16
RFC4-204ENST00000417876 FAT4Q6V0I7 4981 aa1.54□□□□□ -2.16
RFC4-204ENST00000417876 KRTAP19-7Q3SYF9 63 aa1.5□□□□□ -2.17
RFC4-204ENST00000417876 M0R2T5 61 aa1.47□□□□□ -2.17
RFC4-204ENST00000417876 MT1LQ93083 61 aa1.46□□□□□ -2.18
RFC4-204ENST00000417876 CRCT1Q9UGL9 99 aa1.46□□□□□ -2.18
RFC4-204ENST00000417876 MT1EP04732 61 aa1.43□□□□□ -2.18
RFC4-204ENST00000417876 USH2AO75445 5202 aa1.35□□□□□ -2.19
RFC4-204ENST00000417876 KMT2DO14686 5537 aa1.35□□□□□ -2.19
RFC4-204ENST00000417876 MT1AP04731 61 aa1.33□□□□□ -2.2
RFC4-204ENST00000417876 FCGBPQ9Y6R7 5405 aaPredicted RBP1.32□□□□□ -2.2
RFC4-204ENST00000417876 MT1MQ8N339 61 aa1.32□□□□□ -2.2
RFC4-204ENST00000417876 SSPOA2VEC9 5147 aa1.31□□□□□ -2.2
RFC4-204ENST00000417876 MT1GP13640 62 aa1.31□□□□□ -2.2
RFC4-204ENST00000417876 KRTAP19-3Q7Z4W3 81 aa1.28□□□□□ -2.2
RFC4-204ENST00000417876 KRTAP19-6Q3LI70 58 aa1.26□□□□□ -2.21
RFC4-204ENST00000417876 PRM1P04553 51 aa1.25□□□□□ -2.21
RFC4-204ENST00000417876 KRTAP6-1Q3LI64 71 aa1.23□□□□□ -2.21
RFC4-204ENST00000417876 KRTAP6-2Q3LI66 62 aa1.19□□□□□ -2.22
RFC4-204ENST00000417876 SPRR2FQ96RM1 72 aa1.19□□□□□ -2.22
RFC4-204ENST00000417876 MUC12Q9UKN1 5478 aa1.18□□□□□ -2.22
RFC4-204ENST00000417876 SYNE1Q8NF91 8797 aaKnown RBP1.17□□□□□ -2.22
RFC4-204ENST00000417876 SPRR2AP35326 72 aa1.09□□□□□ -2.23
RFC4-204ENST00000417876 SPRR2EP22531 72 aa1.07□□□□□ -2.24
RFC4-204ENST00000417876 FSIP2Q5CZC0 6907 aa1.05□□□□□ -2.24
RFC4-204ENST00000417876 SPRR2BP35325 72 aa1.04□□□□□ -2.24
RFC4-204ENST00000417876 SPRR2DP22532 72 aa1□□□□□ -2.25
RFC4-204ENST00000417876 DSTQ03001 7570 aaKnown RBP0.99□□□□□ -2.25
RFC4-204ENST00000417876 MDN1Q9NU22 5596 aa0.98□□□□□ -2.25
RFC4-204ENST00000417876 MUC5ACP98088 5654 aa0.94□□□□□ -2.26
RFC4-204ENST00000417876 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
RFC4-204ENST00000417876 MACF1Q9UPN3 7388 aaKnown RBP0.92□□□□□ -2.26
RFC4-204ENST00000417876 SYNE2Q8WXH0 6885 aaKnown RBP0.9□□□□□ -2.27
RFC4-204ENST00000417876 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
RFC4-204ENST00000417876 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
RFC4-204ENST00000417876 KRTAP20-2Q3LI61 65 aa0.86□□□□□ -2.27
RFC4-204ENST00000417876 NEBP20929 6669 aa0.83□□□□□ -2.28
RFC4-204ENST00000417876 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
RFC4-204ENST00000417876 GPR98Q8WXG9 6306 aa0.78□□□□□ -2.28
RFC4-204ENST00000417876 KRTAP20-1Q3LI63 56 aa0.77□□□□□ -2.29
RFC4-204ENST00000417876 MT4P47944 62 aa0.76□□□□□ -2.29
RFC4-204ENST00000417876 MUC5BQ9HC84 5762 aaPredicted RBP0.72□□□□□ -2.29
RFC4-204ENST00000417876 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
RFC4-204ENST00000417876 PHGR1C9JFL3 82 aa0.59□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 8.2 ms