RNA–Protein interactions for RNA: ENST00000413366.7

PRKCA-202, Transcript of protein kinase C alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCA, Length 8,751 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-202ENST00000413366 KRTAP9-7A8MTY7 169 aa2.37□□□□□ -2.03
PRKCA-202ENST00000413366 MT1MQ8N339 61 aa2.34□□□□□ -2.03
PRKCA-202ENST00000413366 KRTAP19-2Q3LHN2 52 aa2.33□□□□□ -2.04
PRKCA-202ENST00000413366 KMT2CQ8NEZ4 4911 aaKnown RBP2.33□□□□□ -2.04
PRKCA-202ENST00000413366 LRP2P98164 4655 aa2.33□□□□□ -2.04
PRKCA-202ENST00000413366 KRTAP4-7Q9BYR0 210 aa2.31□□□□□ -2.04
PRKCA-202ENST00000413366 LCE5AQ5TCM9 118 aa2.31□□□□□ -2.04
PRKCA-202ENST00000413366 SYNE1Q8NF91 8797 aaKnown RBP2.3□□□□□ -2.04
PRKCA-202ENST00000413366 HERC2O95714 4834 aa2.27□□□□□ -2.05
PRKCA-202ENST00000413366 BIRC6Q9NR09 4857 aa2.27□□□□□ -2.05
PRKCA-202ENST00000413366 KRTAP6-3Q3LI67 103 aa2.27□□□□□ -2.05
PRKCA-202ENST00000413366 LOC100996750A0A140TA64 210 aa2.25□□□□□ -2.05
PRKCA-202ENST00000413366 PCLOQ9Y6V0 5065 aa2.24□□□□□ -2.05
PRKCA-202ENST00000413366 KRTAP4-3Q9BYR4 195 aa2.21□□□□□ -2.06
PRKCA-202ENST00000413366 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.21□□□□□ -2.06
PRKCA-202ENST00000413366 LCE4AQ5TA78 99 aa2.21□□□□□ -2.06
PRKCA-202ENST00000413366 LCE2AQ5TA79 106 aaPredicted RBP2.2□□□□□ -2.06
PRKCA-202ENST00000413366 MT1AP04731 61 aa2.2□□□□□ -2.06
PRKCA-202ENST00000413366 KRTAP2-2Q9BYT5 123 aa2.19□□□□□ -2.06
PRKCA-202ENST00000413366 ABCA13Q86UQ4 5058 aa2.18□□□□□ -2.06
PRKCA-202ENST00000413366 KRTAP4-9Q9BYQ8 210 aa2.18□□□□□ -2.06
PRKCA-202ENST00000413366 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
PRKCA-202ENST00000413366 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
PRKCA-202ENST00000413366 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
PRKCA-202ENST00000413366 LCE1AQ5T7P2 110 aa2.16□□□□□ -2.06
PRKCA-202ENST00000413366 KRTAP19-7Q3SYF9 63 aa2.14□□□□□ -2.07
PRKCA-202ENST00000413366 EPPK1P58107 5090 aaKnown RBP2.09□□□□□ -2.07
PRKCA-202ENST00000413366 HMCN2Q8NDA2 5059 aa2.09□□□□□ -2.07
PRKCA-202ENST00000413366 RNF213Q63HN8 5207 aa2.07□□□□□ -2.08
PRKCA-202ENST00000413366 KRTAP6-2Q3LI66 62 aa2.06□□□□□ -2.08
PRKCA-202ENST00000413366 KRTAP9-4Q9BYQ2 154 aa2.06□□□□□ -2.08
PRKCA-202ENST00000413366 KRTAP9-9Q9BYP9 154 aa2.05□□□□□ -2.08
PRKCA-202ENST00000413366 KRTAP9-6A8MVA2 160 aa2.04□□□□□ -2.08
PRKCA-202ENST00000413366 SYNE2Q8WXH0 6885 aaKnown RBP2.03□□□□□ -2.08
PRKCA-202ENST00000413366 UBR4Q5T4S7 5183 aa2.02□□□□□ -2.09
PRKCA-202ENST00000413366 FSIP2Q5CZC0 6907 aa2□□□□□ -2.09
PRKCA-202ENST00000413366 KRTAP6-1Q3LI64 71 aa1.99□□□□□ -2.09
PRKCA-202ENST00000413366 MUC2Q02817 5179 aa1.99□□□□□ -2.09
PRKCA-202ENST00000413366 FAT4Q6V0I7 4981 aa1.96□□□□□ -2.1
PRKCA-202ENST00000413366 MUC12Q9UKN1 5478 aa1.81□□□□□ -2.12
PRKCA-202ENST00000413366 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
PRKCA-202ENST00000413366 KRTAP5-9P26371 169 aa1.74□□□□□ -2.13
PRKCA-202ENST00000413366 USH2AO75445 5202 aa1.74□□□□□ -2.13
PRKCA-202ENST00000413366 NEBP20929 6669 aa1.73□□□□□ -2.13
PRKCA-202ENST00000413366 KRTAP4-6Q9BYQ5 205 aa1.73□□□□□ -2.13
PRKCA-202ENST00000413366 KRTAP20-2Q3LI61 65 aa1.72□□□□□ -2.13
PRKCA-202ENST00000413366 KMT2DO14686 5537 aa1.72□□□□□ -2.13
PRKCA-202ENST00000413366 KRTAP4-11Q9BYQ6 195 aa1.7□□□□□ -2.14
PRKCA-202ENST00000413366 SSPOA2VEC9 5147 aa1.68□□□□□ -2.14
PRKCA-202ENST00000413366 KRTAP5-4Q6L8H1 288 aa1.67□□□□□ -2.14
PRKCA-202ENST00000413366 KRTAP5-5Q701N2 237 aaPredicted RBP1.66□□□□□ -2.14
PRKCA-202ENST00000413366 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
PRKCA-202ENST00000413366 KRTAP4-12Q9BQ66 201 aa1.63□□□□□ -2.15
PRKCA-202ENST00000413366 KRTAP4-2Q9BYR5 136 aa1.63□□□□□ -2.15
PRKCA-202ENST00000413366 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
PRKCA-202ENST00000413366 MDN1Q9NU22 5596 aa1.59□□□□□ -2.15
PRKCA-202ENST00000413366 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.15
PRKCA-202ENST00000413366 MACF1Q9UPN3 7388 aaKnown RBP1.56□□□□□ -2.16
PRKCA-202ENST00000413366 DSTQ03001 7570 aaKnown RBP1.56□□□□□ -2.16
PRKCA-202ENST00000413366 GPR98Q8WXG9 6306 aa1.52□□□□□ -2.17
PRKCA-202ENST00000413366 KRTAP5-3Q6L8H2 238 aa1.42□□□□□ -2.18
PRKCA-202ENST00000413366 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
PRKCA-202ENST00000413366 AHNAK2Q8IVF2 5795 aa1.3□□□□□ -2.2
PRKCA-202ENST00000413366 KRTAP5-8O75690 187 aa1.3□□□□□ -2.2
PRKCA-202ENST00000413366 HMCN1Q96RW7 5635 aa1.28□□□□□ -2.2
PRKCA-202ENST00000413366 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
PRKCA-202ENST00000413366 MUC5ACP98088 5654 aa1.26□□□□□ -2.21
PRKCA-202ENST00000413366 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
PRKCA-202ENST00000413366 KRTAP5-2Q701N4 177 aa1.17□□□□□ -2.22
PRKCA-202ENST00000413366 MUC5BQ9HC84 5762 aaPredicted RBP1.11□□□□□ -2.23
PRKCA-202ENST00000413366 KRTAP5-11Q6L8G4 156 aa1.06□□□□□ -2.24
PRKCA-202ENST00000413366 KRTAP5-1Q6L8H4 278 aa1.05□□□□□ -2.24
PRKCA-202ENST00000413366 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.03□□□□□ -2.24
PRKCA-202ENST00000413366 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
PRKCA-202ENST00000413366 AHNAKQ09666 5890 aaKnown RBP1.02□□□□□ -2.25
PRKCA-202ENST00000413366 KRTAP5-7Q6L8G8 165 aa0.99□□□□□ -2.25
PRKCA-202ENST00000413366 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 117.3 ms