RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 KRTAP9-6A0A140TA67 174 aa3.41□□□□□ -1.86
PRPF40A-202ENST00000410080 MT1MQ8N339 61 aa3.41□□□□□ -1.86
PRPF40A-202ENST00000410080 KRTAP19-2Q3LHN2 52 aa3.38□□□□□ -1.87
PRPF40A-202ENST00000410080 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
PRPF40A-202ENST00000410080 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
PRPF40A-202ENST00000410080 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
PRPF40A-202ENST00000410080 LCE1AQ5T7P2 110 aa3.37□□□□□ -1.87
PRPF40A-202ENST00000410080 HERC1Q15751 4861 aa3.34□□□□□ -1.87
PRPF40A-202ENST00000410080 KMT2CQ8NEZ4 4911 aaKnown RBP3.34□□□□□ -1.88
PRPF40A-202ENST00000410080 HERC2O95714 4834 aa3.3□□□□□ -1.88
PRPF40A-202ENST00000410080 KRTAP4-9Q9BYQ8 210 aa3.27□□□□□ -1.89
PRPF40A-202ENST00000410080 KIAA1109Q2LD37 5005 aa3.26□□□□□ -1.89
PRPF40A-202ENST00000410080 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
PRPF40A-202ENST00000410080 BIRC6Q9NR09 4857 aa3.22□□□□□ -1.89
PRPF40A-202ENST00000410080 PCLOQ9Y6V0 5065 aa3.2□□□□□ -1.9
PRPF40A-202ENST00000410080 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
PRPF40A-202ENST00000410080 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
PRPF40A-202ENST00000410080 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
PRPF40A-202ENST00000410080 LCE2AQ5TA79 106 aaPredicted RBP3.12□□□□□ -1.91
PRPF40A-202ENST00000410080 KRTAP6-2Q3LI66 62 aa3.11□□□□□ -1.91
PRPF40A-202ENST00000410080 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
PRPF40A-202ENST00000410080 LCE4AQ5TA78 99 aa3.1□□□□□ -1.91
PRPF40A-202ENST00000410080 MT1AP04731 61 aa3.09□□□□□ -1.91
PRPF40A-202ENST00000410080 HMCN2Q8NDA2 5059 aa3.04□□□□□ -1.92
PRPF40A-202ENST00000410080 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
PRPF40A-202ENST00000410080 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
PRPF40A-202ENST00000410080 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
PRPF40A-202ENST00000410080 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.99□□□□□ -1.93
PRPF40A-202ENST00000410080 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
PRPF40A-202ENST00000410080 EPPK1P58107 5090 aaKnown RBP2.97□□□□□ -1.93
PRPF40A-202ENST00000410080 FSIP2Q5CZC0 6907 aa2.95□□□□□ -1.94
PRPF40A-202ENST00000410080 KRTAP9-4Q9BYQ2 154 aa2.95□□□□□ -1.94
PRPF40A-202ENST00000410080 FAT4Q6V0I7 4981 aa2.91□□□□□ -1.94
PRPF40A-202ENST00000410080 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
PRPF40A-202ENST00000410080 ABCA13Q86UQ4 5058 aa2.77□□□□□ -1.97
PRPF40A-202ENST00000410080 RNF213Q63HN8 5207 aa2.76□□□□□ -1.97
PRPF40A-202ENST00000410080 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
PRPF40A-202ENST00000410080 MUC2Q02817 5179 aa2.73□□□□□ -1.97
PRPF40A-202ENST00000410080 UBR4Q5T4S7 5183 aa2.66□□□□□ -1.98
PRPF40A-202ENST00000410080 KRTAP4-11Q9BYQ6 195 aa2.64□□□□□ -1.99
PRPF40A-202ENST00000410080 KRTAP4-6Q9BYQ5 205 aa2.61□□□□□ -1.99
PRPF40A-202ENST00000410080 KMT2DO14686 5537 aa2.59□□□□□ -1.99
PRPF40A-202ENST00000410080 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
PRPF40A-202ENST00000410080 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
PRPF40A-202ENST00000410080 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
PRPF40A-202ENST00000410080 SYNE1Q8NF91 8797 aaKnown RBP2.48□□□□□ -2.01
PRPF40A-202ENST00000410080 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
PRPF40A-202ENST00000410080 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.02
PRPF40A-202ENST00000410080 NEBP20929 6669 aa2.4□□□□□ -2.02
PRPF40A-202ENST00000410080 KRTAP5-9P26371 169 aa2.4□□□□□ -2.03
PRPF40A-202ENST00000410080 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
PRPF40A-202ENST00000410080 SSPOA2VEC9 5147 aa2.28□□□□□ -2.04
PRPF40A-202ENST00000410080 FCGBPQ9Y6R7 5405 aaPredicted RBP2.28□□□□□ -2.04
PRPF40A-202ENST00000410080 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
PRPF40A-202ENST00000410080 USH2AO75445 5202 aa2.24□□□□□ -2.05
PRPF40A-202ENST00000410080 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
PRPF40A-202ENST00000410080 MUC12Q9UKN1 5478 aa2.07□□□□□ -2.08
PRPF40A-202ENST00000410080 PHGR1C9JFL3 82 aa2□□□□□ -2.09
PRPF40A-202ENST00000410080 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
PRPF40A-202ENST00000410080 KRTAP5-3Q6L8H2 238 aa1.93□□□□□ -2.1
PRPF40A-202ENST00000410080 MDN1Q9NU22 5596 aa1.9□□□□□ -2.11
PRPF40A-202ENST00000410080 KRTAP5-8O75690 187 aa1.84□□□□□ -2.12
PRPF40A-202ENST00000410080 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
PRPF40A-202ENST00000410080 GPR98Q8WXG9 6306 aa1.68□□□□□ -2.14
PRPF40A-202ENST00000410080 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
PRPF40A-202ENST00000410080 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.15
PRPF40A-202ENST00000410080 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.16
PRPF40A-202ENST00000410080 KRTAP5-2Q701N4 177 aa1.58□□□□□ -2.16
PRPF40A-202ENST00000410080 KRTAP5-1Q6L8H4 278 aa1.55□□□□□ -2.16
PRPF40A-202ENST00000410080 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
PRPF40A-202ENST00000410080 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
PRPF40A-202ENST00000410080 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
PRPF40A-202ENST00000410080 AHNAK2Q8IVF2 5795 aa1.35□□□□□ -2.19
PRPF40A-202ENST00000410080 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
PRPF40A-202ENST00000410080 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
PRPF40A-202ENST00000410080 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.23□□□□□ -2.21
PRPF40A-202ENST00000410080 KRTAP5-7Q6L8G8 165 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms