RNA–Protein interactions for RNA: ENST00000409825.5

TTC7A-204, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 4,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-204ENST00000409825 MT1EP04732 61 aa5.1□□□□□ -1.59
TTC7A-204ENST00000409825 MT1LQ93083 61 aa5.06□□□□□ -1.6
TTC7A-204ENST00000409825 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
TTC7A-204ENST00000409825 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
TTC7A-204ENST00000409825 KRTAP6-3Q3LI67 103 aa4.95□□□□□ -1.62
TTC7A-204ENST00000409825 MT1MQ8N339 61 aa4.93□□□□□ -1.62
TTC7A-204ENST00000409825 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
TTC7A-204ENST00000409825 MUC2Q02817 5179 aa4.86□□□□□ -1.63
TTC7A-204ENST00000409825 KRTAP20-1Q3LI63 56 aa4.85□□□□□ -1.63
TTC7A-204ENST00000409825 LCE1AQ5T7P2 110 aa4.83□□□□□ -1.64
TTC7A-204ENST00000409825 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
TTC7A-204ENST00000409825 KRTAP4-7Q9BYR0 210 aa4.81□□□□□ -1.64
TTC7A-204ENST00000409825 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
TTC7A-204ENST00000409825 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
TTC7A-204ENST00000409825 MT4P47944 62 aa4.78□□□□□ -1.64
TTC7A-204ENST00000409825 SYNE2Q8WXH0 6885 aaKnown RBP4.74□□□□□ -1.65
TTC7A-204ENST00000409825 KRTAP2-3P0C7H8 128 aa4.73□□□□□ -1.65
TTC7A-204ENST00000409825 KRTAP2-4Q9BYR9 128 aa4.73□□□□□ -1.65
TTC7A-204ENST00000409825 MT3P25713 68 aa4.7□□□□□ -1.66
TTC7A-204ENST00000409825 LCE3DQ9BYE3 92 aa4.69□□□□□ -1.66
TTC7A-204ENST00000409825 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
TTC7A-204ENST00000409825 LCE3EQ5T5B0 92 aa4.6□□□□□ -1.67
TTC7A-204ENST00000409825 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
TTC7A-204ENST00000409825 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
TTC7A-204ENST00000409825 MT1AP04731 61 aa4.55□□□□□ -1.68
TTC7A-204ENST00000409825 LOC100996750A0A140TA64 210 aa4.52□□□□□ -1.69
TTC7A-204ENST00000409825 LCE5AQ5TCM9 118 aa4.51□□□□□ -1.69
TTC7A-204ENST00000409825 USH2AO75445 5202 aa4.5□□□□□ -1.69
TTC7A-204ENST00000409825 LCE4AQ5TA78 99 aa4.49□□□□□ -1.69
TTC7A-204ENST00000409825 LCE1DQ5T752 114 aa4.34□□□□□ -1.72
TTC7A-204ENST00000409825 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
TTC7A-204ENST00000409825 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
TTC7A-204ENST00000409825 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
TTC7A-204ENST00000409825 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
TTC7A-204ENST00000409825 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
TTC7A-204ENST00000409825 SSPOA2VEC9 5147 aa4.25□□□□□ -1.73
TTC7A-204ENST00000409825 MACF1Q9UPN3 7388 aaKnown RBP4.22□□□□□ -1.73
TTC7A-204ENST00000409825 KMT2DO14686 5537 aa4.21□□□□□ -1.74
TTC7A-204ENST00000409825 NEBP20929 6669 aa4.2□□□□□ -1.74
TTC7A-204ENST00000409825 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
TTC7A-204ENST00000409825 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
TTC7A-204ENST00000409825 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
TTC7A-204ENST00000409825 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
TTC7A-204ENST00000409825 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
TTC7A-204ENST00000409825 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
TTC7A-204ENST00000409825 PRM1P04553 51 aa3.95□□□□□ -1.78
TTC7A-204ENST00000409825 MUC12Q9UKN1 5478 aa3.86□□□□□ -1.79
TTC7A-204ENST00000409825 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.8
TTC7A-204ENST00000409825 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
TTC7A-204ENST00000409825 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.81
TTC7A-204ENST00000409825 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
TTC7A-204ENST00000409825 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
TTC7A-204ENST00000409825 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
TTC7A-204ENST00000409825 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
TTC7A-204ENST00000409825 KRTAP5-4Q6L8H1 288 aa3.62□□□□□ -1.83
TTC7A-204ENST00000409825 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
TTC7A-204ENST00000409825 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
TTC7A-204ENST00000409825 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
TTC7A-204ENST00000409825 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
TTC7A-204ENST00000409825 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.89
TTC7A-204ENST00000409825 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
TTC7A-204ENST00000409825 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
TTC7A-204ENST00000409825 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
TTC7A-204ENST00000409825 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
TTC7A-204ENST00000409825 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
TTC7A-204ENST00000409825 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
TTC7A-204ENST00000409825 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
TTC7A-204ENST00000409825 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
TTC7A-204ENST00000409825 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
TTC7A-204ENST00000409825 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
TTC7A-204ENST00000409825 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
TTC7A-204ENST00000409825 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
TTC7A-204ENST00000409825 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
TTC7A-204ENST00000409825 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
TTC7A-204ENST00000409825 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
TTC7A-204ENST00000409825 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
TTC7A-204ENST00000409825 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
TTC7A-204ENST00000409825 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 99.6 ms