RNA–Protein interactions for RNA: ENST00000409556.5

KDM3A-203, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene KDM3A, Length 4,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-203ENST00000409556 MT1LQ93083 61 aa5.05□□□□□ -1.6
KDM3A-203ENST00000409556 KRTAP9-6A0A140TA67 174 aa5.04□□□□□ -1.6
KDM3A-203ENST00000409556 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
KDM3A-203ENST00000409556 SPRR5A0A1B0GTR4 108 aa4.92□□□□□ -1.62
KDM3A-203ENST00000409556 MT1MQ8N339 61 aa4.9□□□□□ -1.63
KDM3A-203ENST00000409556 MUC2Q02817 5179 aa4.82□□□□□ -1.64
KDM3A-203ENST00000409556 KRTAP19-7Q3SYF9 63 aa4.77□□□□□ -1.65
KDM3A-203ENST00000409556 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
KDM3A-203ENST00000409556 SYNE1Q8NF91 8797 aaKnown RBP4.73□□□□□ -1.65
KDM3A-203ENST00000409556 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
KDM3A-203ENST00000409556 MT4P47944 62 aa4.7□□□□□ -1.66
KDM3A-203ENST00000409556 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
KDM3A-203ENST00000409556 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
KDM3A-203ENST00000409556 LCE3EQ5T5B0 92 aa4.64□□□□□ -1.67
KDM3A-203ENST00000409556 LOC100996750A0A140TA64 210 aa4.63□□□□□ -1.67
KDM3A-203ENST00000409556 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.63□□□□□ -1.67
KDM3A-203ENST00000409556 MT3P25713 68 aa4.63□□□□□ -1.67
KDM3A-203ENST00000409556 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
KDM3A-203ENST00000409556 LCE1AQ5T7P2 110 aa4.61□□□□□ -1.67
KDM3A-203ENST00000409556 KRTAP20-1Q3LI63 56 aa4.58□□□□□ -1.68
KDM3A-203ENST00000409556 MT1AP04731 61 aa4.5□□□□□ -1.69
KDM3A-203ENST00000409556 USH2AO75445 5202 aa4.49□□□□□ -1.69
KDM3A-203ENST00000409556 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
KDM3A-203ENST00000409556 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
KDM3A-203ENST00000409556 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
KDM3A-203ENST00000409556 KRTAP2-2Q9BYT5 123 aa4.34□□□□□ -1.72
KDM3A-203ENST00000409556 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.72
KDM3A-203ENST00000409556 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
KDM3A-203ENST00000409556 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
KDM3A-203ENST00000409556 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
KDM3A-203ENST00000409556 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
KDM3A-203ENST00000409556 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
KDM3A-203ENST00000409556 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.74
KDM3A-203ENST00000409556 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
KDM3A-203ENST00000409556 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
KDM3A-203ENST00000409556 MACF1Q9UPN3 7388 aaKnown RBP4.17□□□□□ -1.74
KDM3A-203ENST00000409556 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
KDM3A-203ENST00000409556 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
KDM3A-203ENST00000409556 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
KDM3A-203ENST00000409556 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
KDM3A-203ENST00000409556 PRM1P04553 51 aa4.1□□□□□ -1.75
KDM3A-203ENST00000409556 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
KDM3A-203ENST00000409556 KMT2DO14686 5537 aa4.1□□□□□ -1.75
KDM3A-203ENST00000409556 NEBP20929 6669 aa4.02□□□□□ -1.77
KDM3A-203ENST00000409556 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
KDM3A-203ENST00000409556 MDN1Q9NU22 5596 aa3.84□□□□□ -1.8
KDM3A-203ENST00000409556 KRTAP4-6Q9BYQ5 205 aa3.71□□□□□ -1.81
KDM3A-203ENST00000409556 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
KDM3A-203ENST00000409556 KRTAP9-9Q9BYP9 154 aa3.62□□□□□ -1.83
KDM3A-203ENST00000409556 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
KDM3A-203ENST00000409556 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
KDM3A-203ENST00000409556 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
KDM3A-203ENST00000409556 GPR98Q8WXG9 6306 aa3.54□□□□□ -1.84
KDM3A-203ENST00000409556 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
KDM3A-203ENST00000409556 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
KDM3A-203ENST00000409556 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
KDM3A-203ENST00000409556 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
KDM3A-203ENST00000409556 KRTAP5-3Q6L8H2 238 aa3.14□□□□□ -1.91
KDM3A-203ENST00000409556 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
KDM3A-203ENST00000409556 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
KDM3A-203ENST00000409556 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
KDM3A-203ENST00000409556 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
KDM3A-203ENST00000409556 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
KDM3A-203ENST00000409556 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
KDM3A-203ENST00000409556 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
KDM3A-203ENST00000409556 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
KDM3A-203ENST00000409556 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
KDM3A-203ENST00000409556 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
KDM3A-203ENST00000409556 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
KDM3A-203ENST00000409556 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
KDM3A-203ENST00000409556 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
KDM3A-203ENST00000409556 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
KDM3A-203ENST00000409556 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
KDM3A-203ENST00000409556 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
KDM3A-203ENST00000409556 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
KDM3A-203ENST00000409556 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
KDM3A-203ENST00000409556 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms