RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 FAT4Q6V0I7 4981 aa5.43□□□□□ -1.54
PCDHA13-202ENST00000409494 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
PCDHA13-202ENST00000409494 UBR4Q5T4S7 5183 aa5.38□□□□□ -1.55
PCDHA13-202ENST00000409494 LCE3DQ9BYE3 92 aa5.36□□□□□ -1.55
PCDHA13-202ENST00000409494 HMCN2Q8NDA2 5059 aa5.32□□□□□ -1.56
PCDHA13-202ENST00000409494 LCE3EQ5T5B0 92 aa5.29□□□□□ -1.56
PCDHA13-202ENST00000409494 LCE1AQ5T7P2 110 aa5.27□□□□□ -1.57
PCDHA13-202ENST00000409494 MT3P25713 68 aa5.26□□□□□ -1.57
PCDHA13-202ENST00000409494 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
PCDHA13-202ENST00000409494 KRTAP6-3Q3LI67 103 aa5.22□□□□□ -1.57
PCDHA13-202ENST00000409494 MUC2Q02817 5179 aa5.1□□□□□ -1.59
PCDHA13-202ENST00000409494 MT1AP04731 61 aa5.09□□□□□ -1.59
PCDHA13-202ENST00000409494 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
PCDHA13-202ENST00000409494 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
PCDHA13-202ENST00000409494 KRTAP4-3Q9BYR4 195 aa5.05□□□□□ -1.6
PCDHA13-202ENST00000409494 FSIP2Q5CZC0 6907 aa5.04□□□□□ -1.6
PCDHA13-202ENST00000409494 KRTAP2-3P0C7H8 128 aa5.02□□□□□ -1.61
PCDHA13-202ENST00000409494 MT4P47944 62 aa5.02□□□□□ -1.61
PCDHA13-202ENST00000409494 KRTAP2-4Q9BYR9 128 aa5.02□□□□□ -1.61
PCDHA13-202ENST00000409494 KRTAP2-1Q9BYU5 128 aa5.02□□□□□ -1.61
PCDHA13-202ENST00000409494 KRTAP20-1Q3LI63 56 aa5.02□□□□□ -1.61
PCDHA13-202ENST00000409494 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
PCDHA13-202ENST00000409494 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
PCDHA13-202ENST00000409494 LCE5AQ5TCM9 118 aa4.92□□□□□ -1.62
PCDHA13-202ENST00000409494 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
PCDHA13-202ENST00000409494 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
PCDHA13-202ENST00000409494 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
PCDHA13-202ENST00000409494 PRM1P04553 51 aa4.8□□□□□ -1.64
PCDHA13-202ENST00000409494 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
PCDHA13-202ENST00000409494 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
PCDHA13-202ENST00000409494 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
PCDHA13-202ENST00000409494 LCE1BQ5T7P3 118 aa4.65□□□□□ -1.66
PCDHA13-202ENST00000409494 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
PCDHA13-202ENST00000409494 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
PCDHA13-202ENST00000409494 KRTAP5-9P26371 169 aa4.59□□□□□ -1.68
PCDHA13-202ENST00000409494 USH2AO75445 5202 aa4.55□□□□□ -1.68
PCDHA13-202ENST00000409494 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
PCDHA13-202ENST00000409494 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
PCDHA13-202ENST00000409494 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
PCDHA13-202ENST00000409494 KMT2DO14686 5537 aa4.45□□□□□ -1.7
PCDHA13-202ENST00000409494 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
PCDHA13-202ENST00000409494 SSPOA2VEC9 5147 aa4.31□□□□□ -1.72
PCDHA13-202ENST00000409494 NEBP20929 6669 aa4.16□□□□□ -1.74
PCDHA13-202ENST00000409494 MUC12Q9UKN1 5478 aa4.13□□□□□ -1.75
PCDHA13-202ENST00000409494 MACF1Q9UPN3 7388 aaKnown RBP4.1□□□□□ -1.75
PCDHA13-202ENST00000409494 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
PCDHA13-202ENST00000409494 KRTAP9-9Q9BYP9 154 aa4.04□□□□□ -1.76
PCDHA13-202ENST00000409494 KRTAP4-6Q9BYQ5 205 aa3.93□□□□□ -1.78
PCDHA13-202ENST00000409494 LCE1CQ5T751 118 aa3.91□□□□□ -1.78
PCDHA13-202ENST00000409494 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
PCDHA13-202ENST00000409494 LCE1FQ5T754 118 aa3.91□□□□□ -1.78
PCDHA13-202ENST00000409494 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
PCDHA13-202ENST00000409494 MDN1Q9NU22 5596 aa3.86□□□□□ -1.79
PCDHA13-202ENST00000409494 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
PCDHA13-202ENST00000409494 GPR98Q8WXG9 6306 aa3.72□□□□□ -1.81
PCDHA13-202ENST00000409494 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
PCDHA13-202ENST00000409494 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
PCDHA13-202ENST00000409494 KRTAP5-3Q6L8H2 238 aa3.41□□□□□ -1.86
PCDHA13-202ENST00000409494 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
PCDHA13-202ENST00000409494 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
PCDHA13-202ENST00000409494 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
PCDHA13-202ENST00000409494 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
PCDHA13-202ENST00000409494 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.9
PCDHA13-202ENST00000409494 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
PCDHA13-202ENST00000409494 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
PCDHA13-202ENST00000409494 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
PCDHA13-202ENST00000409494 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
PCDHA13-202ENST00000409494 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
PCDHA13-202ENST00000409494 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
PCDHA13-202ENST00000409494 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
PCDHA13-202ENST00000409494 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
PCDHA13-202ENST00000409494 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
PCDHA13-202ENST00000409494 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
PCDHA13-202ENST00000409494 PHGR1C9JFL3 82 aa2.54□□□□□ -2
PCDHA13-202ENST00000409494 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
PCDHA13-202ENST00000409494 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
PCDHA13-202ENST00000409494 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 75.2 ms