RNA–Protein interactions for RNA: ENST00000409078.7

CLASP1-203, Transcript of cytoplasmic linker associated protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLASP1, Length 8,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-203ENST00000409078 KRTAP4-7Q9BYR0 210 aa2.7□□□□□ -1.98
CLASP1-203ENST00000409078 FAT3Q8TDW7 4589 aa2.68□□□□□ -1.98
CLASP1-203ENST00000409078 PCLOQ9Y6V0 5065 aa2.67□□□□□ -1.98
CLASP1-203ENST00000409078 KRTAP9-7A8MTY7 169 aa2.64□□□□□ -1.99
CLASP1-203ENST00000409078 LOC100996750A0A140TA64 210 aa2.63□□□□□ -1.99
CLASP1-203ENST00000409078 KRTAP2-3P0C7H8 128 aa2.62□□□□□ -1.99
CLASP1-203ENST00000409078 KRTAP2-4Q9BYR9 128 aa2.62□□□□□ -1.99
CLASP1-203ENST00000409078 EPPK1P58107 5090 aaKnown RBP2.6□□□□□ -1.99
CLASP1-203ENST00000409078 SYNE2Q8WXH0 6885 aaKnown RBP2.59□□□□□ -1.99
CLASP1-203ENST00000409078 KMT2CQ8NEZ4 4911 aaKnown RBP2.58□□□□□ -2
CLASP1-203ENST00000409078 UBR4Q5T4S7 5183 aa2.58□□□□□ -2
CLASP1-203ENST00000409078 HSPG2P98160 4391 aa2.58□□□□□ -2
CLASP1-203ENST00000409078 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
CLASP1-203ENST00000409078 TNXBP22105 4242 aa2.56□□□□□ -2
CLASP1-203ENST00000409078 MYCBP2O75592 4640 aa2.55□□□□□ -2
CLASP1-203ENST00000409078 LCE4AQ5TA78 99 aa2.54□□□□□ -2
CLASP1-203ENST00000409078 MT1AP04731 61 aa2.53□□□□□ -2
CLASP1-203ENST00000409078 LPAP08519 4548 aa2.53□□□□□ -2
CLASP1-203ENST00000409078 KRTAP4-9Q9BYQ8 210 aa2.52□□□□□ -2.01
CLASP1-203ENST00000409078 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
CLASP1-203ENST00000409078 RNF213Q63HN8 5207 aa2.51□□□□□ -2.01
CLASP1-203ENST00000409078 HMCN2Q8NDA2 5059 aa2.49□□□□□ -2.01
CLASP1-203ENST00000409078 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
CLASP1-203ENST00000409078 KRTAP2-2Q9BYT5 123 aa2.48□□□□□ -2.01
CLASP1-203ENST00000409078 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
CLASP1-203ENST00000409078 KRTAP6-2Q3LI66 62 aa2.45□□□□□ -2.02
CLASP1-203ENST00000409078 SYNE1Q8NF91 8797 aaKnown RBP2.39□□□□□ -2.03
CLASP1-203ENST00000409078 LRP2P98164 4655 aa2.38□□□□□ -2.03
CLASP1-203ENST00000409078 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.38□□□□□ -2.03
CLASP1-203ENST00000409078 LCE2AQ5TA79 106 aaPredicted RBP2.38□□□□□ -2.03
CLASP1-203ENST00000409078 KRTAP9-4Q9BYQ2 154 aa2.37□□□□□ -2.03
CLASP1-203ENST00000409078 MUC17Q685J3 4493 aa2.35□□□□□ -2.03
CLASP1-203ENST00000409078 FAT4Q6V0I7 4981 aa2.33□□□□□ -2.04
CLASP1-203ENST00000409078 FSIP2Q5CZC0 6907 aa2.32□□□□□ -2.04
CLASP1-203ENST00000409078 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
CLASP1-203ENST00000409078 KRTAP19-7Q3SYF9 63 aa2.31□□□□□ -2.04
CLASP1-203ENST00000409078 KRTAP19-2Q3LHN2 52 aa2.28□□□□□ -2.04
CLASP1-203ENST00000409078 MUC2Q02817 5179 aa2.23□□□□□ -2.05
CLASP1-203ENST00000409078 USH2AO75445 5202 aa2.18□□□□□ -2.06
CLASP1-203ENST00000409078 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
CLASP1-203ENST00000409078 SSPOA2VEC9 5147 aa2.1□□□□□ -2.07
CLASP1-203ENST00000409078 KRTAP4-11Q9BYQ6 195 aa2.04□□□□□ -2.08
CLASP1-203ENST00000409078 OBSCNQ5VST9 7968 aa2□□□□□ -2.09
CLASP1-203ENST00000409078 KRTAP4-6Q9BYQ5 205 aa1.99□□□□□ -2.09
CLASP1-203ENST00000409078 KRTAP9-6A8MVA2 160 aa1.98□□□□□ -2.09
CLASP1-203ENST00000409078 KRTAP4-12Q9BQ66 201 aa1.96□□□□□ -2.1
CLASP1-203ENST00000409078 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
CLASP1-203ENST00000409078 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.1
CLASP1-203ENST00000409078 MACF1Q9UPN3 7388 aaKnown RBP1.96□□□□□ -2.1
CLASP1-203ENST00000409078 DSTQ03001 7570 aaKnown RBP1.9□□□□□ -2.11
CLASP1-203ENST00000409078 KMT2DO14686 5537 aa1.88□□□□□ -2.11
CLASP1-203ENST00000409078 FCGBPQ9Y6R7 5405 aaPredicted RBP1.85□□□□□ -2.11
CLASP1-203ENST00000409078 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
CLASP1-203ENST00000409078 MUC12Q9UKN1 5478 aa1.81□□□□□ -2.12
CLASP1-203ENST00000409078 KRTAP5-9P26371 169 aa1.81□□□□□ -2.12
CLASP1-203ENST00000409078 NEBP20929 6669 aa1.81□□□□□ -2.12
CLASP1-203ENST00000409078 MDN1Q9NU22 5596 aa1.8□□□□□ -2.12
CLASP1-203ENST00000409078 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.13
CLASP1-203ENST00000409078 KRTAP5-5Q701N2 237 aaPredicted RBP1.68□□□□□ -2.14
CLASP1-203ENST00000409078 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
CLASP1-203ENST00000409078 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
CLASP1-203ENST00000409078 KRTAP5-3Q6L8H2 238 aa1.55□□□□□ -2.16
CLASP1-203ENST00000409078 HMCN1Q96RW7 5635 aa1.47□□□□□ -2.17
CLASP1-203ENST00000409078 MUC5ACP98088 5654 aa1.45□□□□□ -2.18
CLASP1-203ENST00000409078 KRTAP5-8O75690 187 aa1.41□□□□□ -2.18
CLASP1-203ENST00000409078 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
CLASP1-203ENST00000409078 MUC5BQ9HC84 5762 aaPredicted RBP1.39□□□□□ -2.19
CLASP1-203ENST00000409078 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
CLASP1-203ENST00000409078 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
CLASP1-203ENST00000409078 KRTAP5-2Q701N4 177 aa1.18□□□□□ -2.22
CLASP1-203ENST00000409078 KRTAP5-11Q6L8G4 156 aa1.16□□□□□ -2.22
CLASP1-203ENST00000409078 KRTAP5-7Q6L8G8 165 aa1.13□□□□□ -2.23
CLASP1-203ENST00000409078 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
CLASP1-203ENST00000409078 KRTAP5-1Q6L8H4 278 aa1.11□□□□□ -2.23
CLASP1-203ENST00000409078 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.06□□□□□ -2.24
CLASP1-203ENST00000409078 KRTAP21-2Q3LI59 83 aa1.06□□□□□ -2.24
CLASP1-203ENST00000409078 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 371 ms