RNA–Protein interactions for RNA: ENST00000408580.1

RNU6ATAC40P-201, Transcript of RNA, U6atac small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6ATAC40P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC40P-201ENST00000408580 KRTAP9-2Q9BYQ4 174 aa0.92□□□□□ -2.26
RNU6ATAC40P-201ENST00000408580 KRTAP9-6A0A140TA67 174 aa0.91□□□□□ -2.26
RNU6ATAC40P-201ENST00000408580 PRM1P04553 51 aa0.91□□□□□ -2.26
RNU6ATAC40P-201ENST00000408580 KRTAP19-3Q7Z4W3 81 aa0.91□□□□□ -2.26
RNU6ATAC40P-201ENST00000408580 EPPK1P58107 5090 aaKnown RBP0.91□□□□□ -2.26
RNU6ATAC40P-201ENST00000408580 KRTAP6-3Q3LI67 103 aa0.9□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 KRTAP5-5Q701N2 237 aaPredicted RBP0.9□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 LCE3DQ9BYE3 92 aa0.9□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 KRTAP2-2Q9BYT5 123 aa0.9□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 HMCN1Q96RW7 5635 aa0.89□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 KRTAP4-3Q9BYR4 195 aa0.89□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 LCE3BQ5TA77 95 aa0.88□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 LCE5AQ5TCM9 118 aa0.88□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 KRTAP9-7A8MTY7 169 aa0.87□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 KRTAP19-6Q3LI70 58 aa0.87□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 SPRR2FQ96RM1 72 aa0.87□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 KRTAP9-4Q9BYQ2 154 aa0.87□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 MT3P25713 68 aa0.86□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 KRTAP4-9Q9BYQ8 210 aa0.86□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 CRCT1Q9UGL9 99 aa0.86□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 LCE1AQ5T7P2 110 aa0.85□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 KRTAP4-6Q9BYQ5 205 aa0.85□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 RNF213Q63HN8 5207 aa0.84□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 KRTAP6-1Q3LI64 71 aa0.84□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 KRTAP6-2Q3LI66 62 aa0.84□□□□□ -2.27
RNU6ATAC40P-201ENST00000408580 FAT4Q6V0I7 4981 aa0.84□□□□□ -2.28
RNU6ATAC40P-201ENST00000408580 SYNE1Q8NF91 8797 aaKnown RBP0.83□□□□□ -2.28
RNU6ATAC40P-201ENST00000408580 SPRR2AP35326 72 aa0.82□□□□□ -2.28
RNU6ATAC40P-201ENST00000408580 KRTAP9-9Q9BYP9 154 aa0.82□□□□□ -2.28
RNU6ATAC40P-201ENST00000408580 LCE4AQ5TA78 99 aa0.81□□□□□ -2.28
RNU6ATAC40P-201ENST00000408580 USH2AO75445 5202 aa0.79□□□□□ -2.28
RNU6ATAC40P-201ENST00000408580 SPRR2EP22531 72 aa0.79□□□□□ -2.28
RNU6ATAC40P-201ENST00000408580 SPRR2BP35325 72 aa0.79□□□□□ -2.28
RNU6ATAC40P-201ENST00000408580 KMT2DO14686 5537 aa0.78□□□□□ -2.28
RNU6ATAC40P-201ENST00000408580 SSPOA2VEC9 5147 aa0.78□□□□□ -2.28
RNU6ATAC40P-201ENST00000408580 LCE1EQ5T753 118 aa0.76□□□□□ -2.29
RNU6ATAC40P-201ENST00000408580 LCE1FQ5T754 118 aa0.76□□□□□ -2.29
RNU6ATAC40P-201ENST00000408580 SPRR2DP22532 72 aa0.75□□□□□ -2.29
RNU6ATAC40P-201ENST00000408580 LCE1DQ5T752 114 aa0.74□□□□□ -2.29
RNU6ATAC40P-201ENST00000408580 KRTAP4-12Q9BQ66 201 aa0.73□□□□□ -2.29
RNU6ATAC40P-201ENST00000408580 KRTAP5-9P26371 169 aa0.7□□□□□ -2.3
RNU6ATAC40P-201ENST00000408580 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.69□□□□□ -2.3
RNU6ATAC40P-201ENST00000408580 FCGBPQ9Y6R7 5405 aaPredicted RBP0.67□□□□□ -2.3
RNU6ATAC40P-201ENST00000408580 KRTAP5-4Q6L8H1 288 aa0.67□□□□□ -2.3
RNU6ATAC40P-201ENST00000408580 KRTAP4-11Q9BYQ6 195 aa0.66□□□□□ -2.3
RNU6ATAC40P-201ENST00000408580 KRTAP5-10Q6L8G5 202 aa0.65□□□□□ -2.31
RNU6ATAC40P-201ENST00000408580 KRTAP4-4Q9BYR3 166 aa0.65□□□□□ -2.31
RNU6ATAC40P-201ENST00000408580 KRTAP4-2Q9BYR5 136 aa0.65□□□□□ -2.31
RNU6ATAC40P-201ENST00000408580 KRTAP5-1Q6L8H4 278 aa0.63□□□□□ -2.31
RNU6ATAC40P-201ENST00000408580 KRTAP5-2Q701N4 177 aa0.63□□□□□ -2.31
RNU6ATAC40P-201ENST00000408580 OBSCNQ5VST9 7968 aa0.63□□□□□ -2.31
RNU6ATAC40P-201ENST00000408580 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
RNU6ATAC40P-201ENST00000408580 MUC12Q9UKN1 5478 aa0.61□□□□□ -2.31
RNU6ATAC40P-201ENST00000408580 KRTAP20-2Q3LI61 65 aa0.59□□□□□ -2.31
RNU6ATAC40P-201ENST00000408580 GPR98Q8WXG9 6306 aa0.58□□□□□ -2.32
RNU6ATAC40P-201ENST00000408580 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.58□□□□□ -2.32
RNU6ATAC40P-201ENST00000408580 DSTQ03001 7570 aaKnown RBP0.57□□□□□ -2.32
RNU6ATAC40P-201ENST00000408580 LCE1CQ5T751 118 aa0.57□□□□□ -2.32
RNU6ATAC40P-201ENST00000408580 LCE1BQ5T7P3 118 aa0.57□□□□□ -2.32
RNU6ATAC40P-201ENST00000408580 MDN1Q9NU22 5596 aa0.56□□□□□ -2.32
RNU6ATAC40P-201ENST00000408580 SYNE2Q8WXH0 6885 aaKnown RBP0.56□□□□□ -2.32
RNU6ATAC40P-201ENST00000408580 KRTAP5-8O75690 187 aa0.56□□□□□ -2.32
RNU6ATAC40P-201ENST00000408580 MUC5BQ9HC84 5762 aaPredicted RBP0.55□□□□□ -2.32
RNU6ATAC40P-201ENST00000408580 KRTAP21-2Q3LI59 83 aa0.55□□□□□ -2.32
RNU6ATAC40P-201ENST00000408580 MT4P47944 62 aa0.54□□□□□ -2.32
RNU6ATAC40P-201ENST00000408580 KRTAP20-1Q3LI63 56 aa0.54□□□□□ -2.32
RNU6ATAC40P-201ENST00000408580 AHNAKQ09666 5890 aaKnown RBP0.53□□□□□ -2.32
RNU6ATAC40P-201ENST00000408580 MUC5ACP98088 5654 aa0.53□□□□□ -2.32
RNU6ATAC40P-201ENST00000408580 FSIP2Q5CZC0 6907 aa0.51□□□□□ -2.33
RNU6ATAC40P-201ENST00000408580 MACF1Q9UPN3 7388 aaKnown RBP0.49□□□□□ -2.33
RNU6ATAC40P-201ENST00000408580 KRTAP5-11Q6L8G4 156 aa0.48□□□□□ -2.33
RNU6ATAC40P-201ENST00000408580 KRTAP5-7Q6L8G8 165 aa0.48□□□□□ -2.33
RNU6ATAC40P-201ENST00000408580 NEBP20929 6669 aa0.42□□□□□ -2.34
RNU6ATAC40P-201ENST00000408580 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
RNU6ATAC40P-201ENST00000408580 MUC19Q7Z5P9 8384 aa0.39□□□□□ -2.35
RNU6ATAC40P-201ENST00000408580 AHNAK2Q8IVF2 5795 aa0.38□□□□□ -2.35
RNU6ATAC40P-201ENST00000408580 MUC16Q8WXI7 14507 aa0.35□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms