RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 SPRR2AP35326 72 aa5.75□□□□□ -1.49
SNED1-204ENST00000401884 KRTAP19-7Q3SYF9 63 aa5.73□□□□□ -1.49
SNED1-204ENST00000401884 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
SNED1-204ENST00000401884 MT1MQ8N339 61 aa5.62□□□□□ -1.51
SNED1-204ENST00000401884 KRTAP4-3Q9BYR4 195 aa5.6□□□□□ -1.51
SNED1-204ENST00000401884 LOC100996750A0A140TA64 210 aa5.58□□□□□ -1.52
SNED1-204ENST00000401884 LCE3DQ9BYE3 92 aa5.57□□□□□ -1.52
SNED1-204ENST00000401884 OBSCNQ5VST9 7968 aa5.56□□□□□ -1.52
SNED1-204ENST00000401884 SPRR2DP22532 72 aa5.53□□□□□ -1.52
SNED1-204ENST00000401884 LCE3EQ5T5B0 92 aa5.48□□□□□ -1.53
SNED1-204ENST00000401884 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
SNED1-204ENST00000401884 FCGBPQ9Y6R7 5405 aaPredicted RBP5.42□□□□□ -1.54
SNED1-204ENST00000401884 USH2AO75445 5202 aa5.42□□□□□ -1.54
SNED1-204ENST00000401884 KRTAP2-3P0C7H8 128 aa5.41□□□□□ -1.54
SNED1-204ENST00000401884 KRTAP2-4Q9BYR9 128 aa5.41□□□□□ -1.54
SNED1-204ENST00000401884 KRTAP2-1Q9BYU5 128 aa5.41□□□□□ -1.54
SNED1-204ENST00000401884 DSTQ03001 7570 aaKnown RBP5.38□□□□□ -1.55
SNED1-204ENST00000401884 KMT2DO14686 5537 aa5.32□□□□□ -1.56
SNED1-204ENST00000401884 LCE2DQ5TA82 110 aaPredicted RBP5.28□□□□□ -1.56
SNED1-204ENST00000401884 KRTAP9-2Q9BYQ4 174 aa5.25□□□□□ -1.57
SNED1-204ENST00000401884 SYNE2Q8WXH0 6885 aaKnown RBP5.19□□□□□ -1.58
SNED1-204ENST00000401884 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
SNED1-204ENST00000401884 MT1AP04731 61 aa5.16□□□□□ -1.58
SNED1-204ENST00000401884 MT3P25713 68 aa5.16□□□□□ -1.58
SNED1-204ENST00000401884 PRM1P04553 51 aa5.09□□□□□ -1.59
SNED1-204ENST00000401884 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
SNED1-204ENST00000401884 KRTAP6-1Q3LI64 71 aa5□□□□□ -1.61
SNED1-204ENST00000401884 MUC12Q9UKN1 5478 aa4.99□□□□□ -1.61
SNED1-204ENST00000401884 MT4P47944 62 aa4.96□□□□□ -1.62
SNED1-204ENST00000401884 LCE1AQ5T7P2 110 aa4.9□□□□□ -1.62
SNED1-204ENST00000401884 SSPOA2VEC9 5147 aa4.9□□□□□ -1.62
SNED1-204ENST00000401884 MACF1Q9UPN3 7388 aaKnown RBP4.77□□□□□ -1.65
SNED1-204ENST00000401884 KRTAP6-2Q3LI66 62 aa4.76□□□□□ -1.65
SNED1-204ENST00000401884 KRTAP9-4Q9BYQ2 154 aa4.74□□□□□ -1.65
SNED1-204ENST00000401884 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
SNED1-204ENST00000401884 KRTAP9-6A0A140TA67 174 aa4.73□□□□□ -1.65
SNED1-204ENST00000401884 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.66
SNED1-204ENST00000401884 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
SNED1-204ENST00000401884 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
SNED1-204ENST00000401884 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.61□□□□□ -1.67
SNED1-204ENST00000401884 KRTAP5-9P26371 169 aa4.47□□□□□ -1.69
SNED1-204ENST00000401884 LCE4AQ5TA78 99 aa4.4□□□□□ -1.7
SNED1-204ENST00000401884 MDN1Q9NU22 5596 aa4.38□□□□□ -1.71
SNED1-204ENST00000401884 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
SNED1-204ENST00000401884 KRTAP2-2Q9BYT5 123 aa4.3□□□□□ -1.72
SNED1-204ENST00000401884 MUC19Q7Z5P9 8384 aa4.17□□□□□ -1.74
SNED1-204ENST00000401884 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
SNED1-204ENST00000401884 NEBP20929 6669 aa4.1□□□□□ -1.75
SNED1-204ENST00000401884 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
SNED1-204ENST00000401884 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
SNED1-204ENST00000401884 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
SNED1-204ENST00000401884 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
SNED1-204ENST00000401884 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
SNED1-204ENST00000401884 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
SNED1-204ENST00000401884 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
SNED1-204ENST00000401884 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
SNED1-204ENST00000401884 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
SNED1-204ENST00000401884 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
SNED1-204ENST00000401884 HMCN1Q96RW7 5635 aa3.53□□□□□ -1.84
SNED1-204ENST00000401884 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
SNED1-204ENST00000401884 KRTAP4-12Q9BQ66 201 aa3.36□□□□□ -1.87
SNED1-204ENST00000401884 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
SNED1-204ENST00000401884 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
SNED1-204ENST00000401884 KRTAP5-3Q6L8H2 238 aa3.23□□□□□ -1.89
SNED1-204ENST00000401884 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
SNED1-204ENST00000401884 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
SNED1-204ENST00000401884 KRTAP5-8O75690 187 aa3□□□□□ -1.93
SNED1-204ENST00000401884 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
SNED1-204ENST00000401884 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
SNED1-204ENST00000401884 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
SNED1-204ENST00000401884 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
SNED1-204ENST00000401884 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
SNED1-204ENST00000401884 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
SNED1-204ENST00000401884 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
SNED1-204ENST00000401884 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
SNED1-204ENST00000401884 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
SNED1-204ENST00000401884 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 71.5 ms