RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 SPRR2BP35325 72 aa3.02□□□□□ -1.93
PTPRM-203ENST00000400060 SPRR2AP35326 72 aa3.02□□□□□ -1.93
PTPRM-203ENST00000400060 KRTAP4-7Q9BYR0 210 aa3.02□□□□□ -1.93
PTPRM-203ENST00000400060 KRTAP19-6Q3LI70 58 aa2.99□□□□□ -1.93
PTPRM-203ENST00000400060 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
PTPRM-203ENST00000400060 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
PTPRM-203ENST00000400060 RNF213Q63HN8 5207 aa2.97□□□□□ -1.93
PTPRM-203ENST00000400060 LCE2AQ5TA79 106 aaPredicted RBP2.97□□□□□ -1.93
PTPRM-203ENST00000400060 UBR4Q5T4S7 5183 aa2.97□□□□□ -1.93
PTPRM-203ENST00000400060 KRTAP19-7Q3SYF9 63 aa2.95□□□□□ -1.94
PTPRM-203ENST00000400060 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
PTPRM-203ENST00000400060 MT1MQ8N339 61 aa2.94□□□□□ -1.94
PTPRM-203ENST00000400060 SPRR2DP22532 72 aa2.92□□□□□ -1.94
PTPRM-203ENST00000400060 MT3P25713 68 aa2.92□□□□□ -1.94
PTPRM-203ENST00000400060 KRTAP9-6A0A140TA67 174 aa2.89□□□□□ -1.95
PTPRM-203ENST00000400060 FSIP2Q5CZC0 6907 aa2.85□□□□□ -1.95
PTPRM-203ENST00000400060 LOC100996750A0A140TA64 210 aa2.82□□□□□ -1.96
PTPRM-203ENST00000400060 KRTAP4-3Q9BYR4 195 aa2.82□□□□□ -1.96
PTPRM-203ENST00000400060 KRTAP9-2Q9BYQ4 174 aa2.79□□□□□ -1.96
PTPRM-203ENST00000400060 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
PTPRM-203ENST00000400060 KRTAP9-7A8MTY7 169 aa2.72□□□□□ -1.97
PTPRM-203ENST00000400060 KRTAP2-2Q9BYT5 123 aa2.69□□□□□ -1.98
PTPRM-203ENST00000400060 KRTAP4-9Q9BYQ8 210 aa2.68□□□□□ -1.98
PTPRM-203ENST00000400060 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
PTPRM-203ENST00000400060 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
PTPRM-203ENST00000400060 LCE5AQ5TCM9 118 aa2.65□□□□□ -1.98
PTPRM-203ENST00000400060 LCE1AQ5T7P2 110 aa2.63□□□□□ -1.99
PTPRM-203ENST00000400060 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
PTPRM-203ENST00000400060 USH2AO75445 5202 aa2.59□□□□□ -2
PTPRM-203ENST00000400060 KRTAP9-4Q9BYQ2 154 aa2.58□□□□□ -2
PTPRM-203ENST00000400060 KRTAP6-3Q3LI67 103 aa2.58□□□□□ -2
PTPRM-203ENST00000400060 MT4P47944 62 aa2.54□□□□□ -2
PTPRM-203ENST00000400060 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
PTPRM-203ENST00000400060 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
PTPRM-203ENST00000400060 KMT2DO14686 5537 aa2.47□□□□□ -2.01
PTPRM-203ENST00000400060 LCE1DQ5T752 114 aa2.45□□□□□ -2.02
PTPRM-203ENST00000400060 FCGBPQ9Y6R7 5405 aaPredicted RBP2.44□□□□□ -2.02
PTPRM-203ENST00000400060 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
PTPRM-203ENST00000400060 SYNE2Q8WXH0 6885 aaKnown RBP2.42□□□□□ -2.02
PTPRM-203ENST00000400060 DSTQ03001 7570 aaKnown RBP2.39□□□□□ -2.03
PTPRM-203ENST00000400060 LCE4AQ5TA78 99 aa2.39□□□□□ -2.03
PTPRM-203ENST00000400060 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.38□□□□□ -2.03
PTPRM-203ENST00000400060 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
PTPRM-203ENST00000400060 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
PTPRM-203ENST00000400060 KRTAP5-9P26371 169 aa2.34□□□□□ -2.04
PTPRM-203ENST00000400060 GPR98Q8WXG9 6306 aa2.31□□□□□ -2.04
PTPRM-203ENST00000400060 MACF1Q9UPN3 7388 aaKnown RBP2.27□□□□□ -2.05
PTPRM-203ENST00000400060 MUC12Q9UKN1 5478 aa2.26□□□□□ -2.05
PTPRM-203ENST00000400060 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
PTPRM-203ENST00000400060 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
PTPRM-203ENST00000400060 KRTAP4-11Q9BYQ6 195 aa2.2□□□□□ -2.06
PTPRM-203ENST00000400060 KRTAP9-9Q9BYP9 154 aa2.13□□□□□ -2.07
PTPRM-203ENST00000400060 NEBP20929 6669 aa2.1□□□□□ -2.07
PTPRM-203ENST00000400060 KRTAP20-2Q3LI61 65 aa2.09□□□□□ -2.07
PTPRM-203ENST00000400060 KRTAP4-6Q9BYQ5 205 aa2.08□□□□□ -2.08
PTPRM-203ENST00000400060 MDN1Q9NU22 5596 aa2.07□□□□□ -2.08
PTPRM-203ENST00000400060 KRTAP5-4Q6L8H1 288 aa1.97□□□□□ -2.09
PTPRM-203ENST00000400060 KRTAP4-12Q9BQ66 201 aa1.85□□□□□ -2.11
PTPRM-203ENST00000400060 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
PTPRM-203ENST00000400060 AHNAK2Q8IVF2 5795 aa1.76□□□□□ -2.13
PTPRM-203ENST00000400060 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
PTPRM-203ENST00000400060 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
PTPRM-203ENST00000400060 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
PTPRM-203ENST00000400060 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
PTPRM-203ENST00000400060 KRTAP5-3Q6L8H2 238 aa1.71□□□□□ -2.14
PTPRM-203ENST00000400060 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
PTPRM-203ENST00000400060 KRTAP4-2Q9BYR5 136 aa1.67□□□□□ -2.14
PTPRM-203ENST00000400060 KRTAP5-1Q6L8H4 278 aa1.62□□□□□ -2.15
PTPRM-203ENST00000400060 KRTAP5-8O75690 187 aa1.52□□□□□ -2.17
PTPRM-203ENST00000400060 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
PTPRM-203ENST00000400060 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
PTPRM-203ENST00000400060 KRTAP21-2Q3LI59 83 aa1.47□□□□□ -2.17
PTPRM-203ENST00000400060 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
PTPRM-203ENST00000400060 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
PTPRM-203ENST00000400060 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
PTPRM-203ENST00000400060 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
PTPRM-203ENST00000400060 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 63 ms