RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
USP47-203ENST00000399455 PCLOQ9Y6V0 5065 aa2.53□□□□□ -2
USP47-203ENST00000399455 LPAP08519 4548 aa2.52□□□□□ -2.01
USP47-203ENST00000399455 RNF213Q63HN8 5207 aa2.52□□□□□ -2.01
USP47-203ENST00000399455 EPPK1P58107 5090 aaKnown RBP2.51□□□□□ -2.01
USP47-203ENST00000399455 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.48□□□□□ -2.01
USP47-203ENST00000399455 LCE1AQ5T7P2 110 aa2.46□□□□□ -2.02
USP47-203ENST00000399455 LCE4AQ5TA78 99 aa2.45□□□□□ -2.02
USP47-203ENST00000399455 UBR4Q5T4S7 5183 aa2.44□□□□□ -2.02
USP47-203ENST00000399455 LRP2P98164 4655 aa2.43□□□□□ -2.02
USP47-203ENST00000399455 KRTAP2-2Q9BYT5 123 aa2.43□□□□□ -2.02
USP47-203ENST00000399455 KRTAP2-1Q9BYU5 128 aa2.43□□□□□ -2.02
USP47-203ENST00000399455 LCE1DQ5T752 114 aa2.43□□□□□ -2.02
USP47-203ENST00000399455 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
USP47-203ENST00000399455 KMT2CQ8NEZ4 4911 aaKnown RBP2.42□□□□□ -2.02
USP47-203ENST00000399455 KRTAP4-7Q9BYR0 210 aa2.4□□□□□ -2.02
USP47-203ENST00000399455 KIAA1109Q2LD37 5005 aa2.39□□□□□ -2.03
USP47-203ENST00000399455 MT1AP04731 61 aa2.37□□□□□ -2.03
USP47-203ENST00000399455 LCE5AQ5TCM9 118 aa2.36□□□□□ -2.03
USP47-203ENST00000399455 LOC100996750A0A140TA64 210 aa2.33□□□□□ -2.04
USP47-203ENST00000399455 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
USP47-203ENST00000399455 ABCA13Q86UQ4 5058 aa2.31□□□□□ -2.04
USP47-203ENST00000399455 KRTAP19-7Q3SYF9 63 aa2.27□□□□□ -2.05
USP47-203ENST00000399455 KRTAP4-9Q9BYQ8 210 aa2.27□□□□□ -2.05
USP47-203ENST00000399455 HMCN2Q8NDA2 5059 aa2.26□□□□□ -2.05
USP47-203ENST00000399455 FAT4Q6V0I7 4981 aa2.25□□□□□ -2.05
USP47-203ENST00000399455 KRTAP9-4Q9BYQ2 154 aa2.23□□□□□ -2.05
USP47-203ENST00000399455 PRM1P04553 51 aa2.22□□□□□ -2.05
USP47-203ENST00000399455 MUC2Q02817 5179 aa2.21□□□□□ -2.06
USP47-203ENST00000399455 SYNE2Q8WXH0 6885 aaKnown RBP2.2□□□□□ -2.06
USP47-203ENST00000399455 KRTAP9-9Q9BYP9 154 aa2.19□□□□□ -2.06
USP47-203ENST00000399455 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
USP47-203ENST00000399455 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
USP47-203ENST00000399455 LCE1EQ5T753 118 aa2.17□□□□□ -2.06
USP47-203ENST00000399455 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
USP47-203ENST00000399455 OBSCNQ5VST9 7968 aa2.15□□□□□ -2.06
USP47-203ENST00000399455 USH2AO75445 5202 aa2.14□□□□□ -2.07
USP47-203ENST00000399455 KRTAP6-1Q3LI64 71 aa2.13□□□□□ -2.07
USP47-203ENST00000399455 KRTAP5-9P26371 169 aa2.06□□□□□ -2.08
USP47-203ENST00000399455 NEBP20929 6669 aa2.01□□□□□ -2.09
USP47-203ENST00000399455 FSIP2Q5CZC0 6907 aa2□□□□□ -2.09
USP47-203ENST00000399455 SSPOA2VEC9 5147 aa1.99□□□□□ -2.09
USP47-203ENST00000399455 KMT2DO14686 5537 aa1.91□□□□□ -2.1
USP47-203ENST00000399455 KRTAP20-2Q3LI61 65 aa1.91□□□□□ -2.1
USP47-203ENST00000399455 KRTAP5-4Q6L8H1 288 aa1.9□□□□□ -2.11
USP47-203ENST00000399455 MDN1Q9NU22 5596 aa1.87□□□□□ -2.11
USP47-203ENST00000399455 KRTAP4-6Q9BYQ5 205 aa1.87□□□□□ -2.11
USP47-203ENST00000399455 KRTAP9-6A8MVA2 160 aa1.87□□□□□ -2.11
USP47-203ENST00000399455 SYNE1Q8NF91 8797 aaKnown RBP1.78□□□□□ -2.12
USP47-203ENST00000399455 DSTQ03001 7570 aaKnown RBP1.74□□□□□ -2.13
USP47-203ENST00000399455 KRTAP4-11Q9BYQ6 195 aa1.74□□□□□ -2.13
USP47-203ENST00000399455 MACF1Q9UPN3 7388 aaKnown RBP1.72□□□□□ -2.13
USP47-203ENST00000399455 FCGBPQ9Y6R7 5405 aaPredicted RBP1.69□□□□□ -2.14
USP47-203ENST00000399455 MUC12Q9UKN1 5478 aa1.67□□□□□ -2.14
USP47-203ENST00000399455 KRTAP4-12Q9BQ66 201 aa1.65□□□□□ -2.15
USP47-203ENST00000399455 KRTAP4-2Q9BYR5 136 aa1.65□□□□□ -2.15
USP47-203ENST00000399455 KRTAP5-3Q6L8H2 238 aa1.63□□□□□ -2.15
USP47-203ENST00000399455 KRTAP4-4Q9BYR3 166 aa1.58□□□□□ -2.16
USP47-203ENST00000399455 KRTAP5-5Q701N2 237 aaPredicted RBP1.58□□□□□ -2.16
USP47-203ENST00000399455 MUC5ACP98088 5654 aa1.48□□□□□ -2.17
USP47-203ENST00000399455 KRTAP5-8O75690 187 aa1.44□□□□□ -2.18
USP47-203ENST00000399455 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
USP47-203ENST00000399455 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
USP47-203ENST00000399455 GPR98Q8WXG9 6306 aa1.4□□□□□ -2.19
USP47-203ENST00000399455 HMCN1Q96RW7 5635 aa1.35□□□□□ -2.19
USP47-203ENST00000399455 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.19
USP47-203ENST00000399455 AHNAK2Q8IVF2 5795 aa1.31□□□□□ -2.2
USP47-203ENST00000399455 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
USP47-203ENST00000399455 KRTAP5-7Q6L8G8 165 aa1.24□□□□□ -2.21
USP47-203ENST00000399455 KRTAP5-11Q6L8G4 156 aa1.23□□□□□ -2.21
USP47-203ENST00000399455 KRTAP5-10Q6L8G5 202 aa1.21□□□□□ -2.22
USP47-203ENST00000399455 KRTAP5-1Q6L8H4 278 aa1.15□□□□□ -2.23
USP47-203ENST00000399455 KRTAP21-2Q3LI59 83 aa1.09□□□□□ -2.23
USP47-203ENST00000399455 AHNAKQ09666 5890 aaKnown RBP1.08□□□□□ -2.24
USP47-203ENST00000399455 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
USP47-203ENST00000399455 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.06□□□□□ -2.24
USP47-203ENST00000399455 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 169.3 ms