RNA–Protein interactions for RNA: ENST00000398645.6

KDM2A-202, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-202ENST00000398645 HERC2O95714 4834 aa5.64□□□□□ -1.51
KDM2A-202ENST00000398645 HERC1Q15751 4861 aa5.58□□□□□ -1.52
KDM2A-202ENST00000398645 RYR2Q92736 4967 aa5.58□□□□□ -1.52
KDM2A-202ENST00000398645 KRTAP19-2Q3LHN2 52 aa5.56□□□□□ -1.52
KDM2A-202ENST00000398645 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
KDM2A-202ENST00000398645 KRTAP9-6A0A140TA67 174 aa5.5□□□□□ -1.53
KDM2A-202ENST00000398645 KRTAP2-3P0C7H8 128 aa5.49□□□□□ -1.53
KDM2A-202ENST00000398645 KRTAP2-4Q9BYR9 128 aa5.49□□□□□ -1.53
KDM2A-202ENST00000398645 KRTAP2-1Q9BYU5 128 aa5.49□□□□□ -1.53
KDM2A-202ENST00000398645 KRTAP20-1Q3LI63 56 aa5.47□□□□□ -1.53
KDM2A-202ENST00000398645 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
KDM2A-202ENST00000398645 KIAA1109Q2LD37 5005 aa5.41□□□□□ -1.54
KDM2A-202ENST00000398645 LCE1CQ5T751 118 aa5.4□□□□□ -1.55
KDM2A-202ENST00000398645 LCE1EQ5T753 118 aa5.4□□□□□ -1.55
KDM2A-202ENST00000398645 LCE1FQ5T754 118 aa5.4□□□□□ -1.55
KDM2A-202ENST00000398645 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.55
KDM2A-202ENST00000398645 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
KDM2A-202ENST00000398645 MT1AP04731 61 aa5.36□□□□□ -1.55
KDM2A-202ENST00000398645 KRTAP19-7Q3SYF9 63 aa5.36□□□□□ -1.55
KDM2A-202ENST00000398645 KRTAP6-1Q3LI64 71 aa5.33□□□□□ -1.56
KDM2A-202ENST00000398645 PCLOQ9Y6V0 5065 aa5.24□□□□□ -1.57
KDM2A-202ENST00000398645 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
KDM2A-202ENST00000398645 FSIP2Q5CZC0 6907 aa5.15□□□□□ -1.59
KDM2A-202ENST00000398645 HMCN2Q8NDA2 5059 aa5.14□□□□□ -1.59
KDM2A-202ENST00000398645 BIRC6Q9NR09 4857 aa5.12□□□□□ -1.59
KDM2A-202ENST00000398645 LCE4AQ5TA78 99 aa5.08□□□□□ -1.6
KDM2A-202ENST00000398645 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
KDM2A-202ENST00000398645 LCE2AQ5TA79 106 aaPredicted RBP4.83□□□□□ -1.64
KDM2A-202ENST00000398645 KRTAP2-2Q9BYT5 123 aa4.82□□□□□ -1.64
KDM2A-202ENST00000398645 FAT4Q6V0I7 4981 aa4.82□□□□□ -1.64
KDM2A-202ENST00000398645 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
KDM2A-202ENST00000398645 MUC2Q02817 5179 aa4.8□□□□□ -1.64
KDM2A-202ENST00000398645 EPPK1P58107 5090 aaKnown RBP4.79□□□□□ -1.64
KDM2A-202ENST00000398645 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
KDM2A-202ENST00000398645 ABCA13Q86UQ4 5058 aa4.7□□□□□ -1.66
KDM2A-202ENST00000398645 UBR4Q5T4S7 5183 aa4.69□□□□□ -1.66
KDM2A-202ENST00000398645 SYNE1Q8NF91 8797 aaKnown RBP4.66□□□□□ -1.66
KDM2A-202ENST00000398645 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.67
KDM2A-202ENST00000398645 KRTAP6-3Q3LI67 103 aa4.64□□□□□ -1.67
KDM2A-202ENST00000398645 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
KDM2A-202ENST00000398645 RNF213Q63HN8 5207 aa4.57□□□□□ -1.68
KDM2A-202ENST00000398645 KMT2DO14686 5537 aa4.56□□□□□ -1.68
KDM2A-202ENST00000398645 KRTAP4-4Q9BYR3 166 aa4.54□□□□□ -1.68
KDM2A-202ENST00000398645 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
KDM2A-202ENST00000398645 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.71
KDM2A-202ENST00000398645 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
KDM2A-202ENST00000398645 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
KDM2A-202ENST00000398645 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
KDM2A-202ENST00000398645 FCGBPQ9Y6R7 5405 aaPredicted RBP4.28□□□□□ -1.72
KDM2A-202ENST00000398645 SSPOA2VEC9 5147 aa4.13□□□□□ -1.75
KDM2A-202ENST00000398645 USH2AO75445 5202 aa4.06□□□□□ -1.76
KDM2A-202ENST00000398645 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
KDM2A-202ENST00000398645 KRTAP5-5Q701N2 237 aaPredicted RBP3.89□□□□□ -1.79
KDM2A-202ENST00000398645 NEBP20929 6669 aa3.81□□□□□ -1.8
KDM2A-202ENST00000398645 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
KDM2A-202ENST00000398645 MUC12Q9UKN1 5478 aa3.61□□□□□ -1.83
KDM2A-202ENST00000398645 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
KDM2A-202ENST00000398645 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
KDM2A-202ENST00000398645 PHGR1C9JFL3 82 aa3.21□□□□□ -1.89
KDM2A-202ENST00000398645 MDN1Q9NU22 5596 aa3.2□□□□□ -1.9
KDM2A-202ENST00000398645 KRTAP5-3Q6L8H2 238 aa3.05□□□□□ -1.92
KDM2A-202ENST00000398645 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
KDM2A-202ENST00000398645 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
KDM2A-202ENST00000398645 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
KDM2A-202ENST00000398645 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
KDM2A-202ENST00000398645 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
KDM2A-202ENST00000398645 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
KDM2A-202ENST00000398645 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
KDM2A-202ENST00000398645 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
KDM2A-202ENST00000398645 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
KDM2A-202ENST00000398645 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
KDM2A-202ENST00000398645 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
KDM2A-202ENST00000398645 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
KDM2A-202ENST00000398645 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
KDM2A-202ENST00000398645 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
KDM2A-202ENST00000398645 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
KDM2A-202ENST00000398645 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 59.6 ms