RNA–Protein interactions for RNA: ENST00000398637.9

SLC38A1-201, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 8,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-201ENST00000398637 LOC100996750A0A140TA64 210 aa3.47□□□□□ -1.85
SLC38A1-201ENST00000398637 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
SLC38A1-201ENST00000398637 SYNE2Q8WXH0 6885 aaKnown RBP3.41□□□□□ -1.86
SLC38A1-201ENST00000398637 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
SLC38A1-201ENST00000398637 RYR3Q15413 4870 aa3.38□□□□□ -1.87
SLC38A1-201ENST00000398637 MYCBP2O75592 4640 aa3.38□□□□□ -1.87
SLC38A1-201ENST00000398637 HYDINQ4G0P3 5121 aa3.33□□□□□ -1.88
SLC38A1-201ENST00000398637 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
SLC38A1-201ENST00000398637 KRTAP2-1Q9BYU5 128 aa3.3□□□□□ -1.88
SLC38A1-201ENST00000398637 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
SLC38A1-201ENST00000398637 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
SLC38A1-201ENST00000398637 LCE4AQ5TA78 99 aa3.24□□□□□ -1.89
SLC38A1-201ENST00000398637 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
SLC38A1-201ENST00000398637 MT1AP04731 61 aa3.18□□□□□ -1.9
SLC38A1-201ENST00000398637 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
SLC38A1-201ENST00000398637 LCE2AQ5TA79 106 aaPredicted RBP3.15□□□□□ -1.91
SLC38A1-201ENST00000398637 LRP2P98164 4655 aa3.13□□□□□ -1.91
SLC38A1-201ENST00000398637 FSIP2Q5CZC0 6907 aa3.13□□□□□ -1.91
SLC38A1-201ENST00000398637 KIAA1109Q2LD37 5005 aa3.12□□□□□ -1.91
SLC38A1-201ENST00000398637 HERC2O95714 4834 aa3.1□□□□□ -1.91
SLC38A1-201ENST00000398637 MUC17Q685J3 4493 aa3.1□□□□□ -1.91
SLC38A1-201ENST00000398637 RYR2Q92736 4967 aa3.09□□□□□ -1.92
SLC38A1-201ENST00000398637 PCLOQ9Y6V0 5065 aa3.08□□□□□ -1.92
SLC38A1-201ENST00000398637 KRTAP19-2Q3LHN2 52 aa3.01□□□□□ -1.93
SLC38A1-201ENST00000398637 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
SLC38A1-201ENST00000398637 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
SLC38A1-201ENST00000398637 KMT2CQ8NEZ4 4911 aaKnown RBP2.97□□□□□ -1.93
SLC38A1-201ENST00000398637 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
SLC38A1-201ENST00000398637 EPPK1P58107 5090 aaKnown RBP2.91□□□□□ -1.94
SLC38A1-201ENST00000398637 BIRC6Q9NR09 4857 aa2.91□□□□□ -1.94
SLC38A1-201ENST00000398637 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
SLC38A1-201ENST00000398637 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
SLC38A1-201ENST00000398637 ABCA13Q86UQ4 5058 aa2.83□□□□□ -1.96
SLC38A1-201ENST00000398637 HERC1Q15751 4861 aa2.83□□□□□ -1.96
SLC38A1-201ENST00000398637 MUC2Q02817 5179 aa2.78□□□□□ -1.96
SLC38A1-201ENST00000398637 KRTAP4-6Q9BYQ5 205 aa2.71□□□□□ -1.98
SLC38A1-201ENST00000398637 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
SLC38A1-201ENST00000398637 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
SLC38A1-201ENST00000398637 HMCN2Q8NDA2 5059 aa2.65□□□□□ -1.99
SLC38A1-201ENST00000398637 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
SLC38A1-201ENST00000398637 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
SLC38A1-201ENST00000398637 MACF1Q9UPN3 7388 aaKnown RBP2.62□□□□□ -1.99
SLC38A1-201ENST00000398637 RNF213Q63HN8 5207 aa2.6□□□□□ -1.99
SLC38A1-201ENST00000398637 KRTAP4-11Q9BYQ6 195 aa2.59□□□□□ -1.99
SLC38A1-201ENST00000398637 UBR4Q5T4S7 5183 aa2.57□□□□□ -2
SLC38A1-201ENST00000398637 FAT4Q6V0I7 4981 aa2.56□□□□□ -2
SLC38A1-201ENST00000398637 NEBP20929 6669 aa2.53□□□□□ -2
SLC38A1-201ENST00000398637 DSTQ03001 7570 aaKnown RBP2.52□□□□□ -2.01
SLC38A1-201ENST00000398637 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
SLC38A1-201ENST00000398637 KMT2DO14686 5537 aa2.44□□□□□ -2.02
SLC38A1-201ENST00000398637 KRTAP5-9P26371 169 aa2.36□□□□□ -2.03
SLC38A1-201ENST00000398637 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
SLC38A1-201ENST00000398637 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
SLC38A1-201ENST00000398637 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
SLC38A1-201ENST00000398637 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
SLC38A1-201ENST00000398637 USH2AO75445 5202 aa2.21□□□□□ -2.06
SLC38A1-201ENST00000398637 FCGBPQ9Y6R7 5405 aaPredicted RBP2.21□□□□□ -2.06
SLC38A1-201ENST00000398637 KRTAP5-3Q6L8H2 238 aa2.12□□□□□ -2.07
SLC38A1-201ENST00000398637 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
SLC38A1-201ENST00000398637 SSPOA2VEC9 5147 aa2.11□□□□□ -2.07
SLC38A1-201ENST00000398637 MDN1Q9NU22 5596 aa1.98□□□□□ -2.09
SLC38A1-201ENST00000398637 MUC12Q9UKN1 5478 aa1.95□□□□□ -2.1
SLC38A1-201ENST00000398637 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
SLC38A1-201ENST00000398637 MUC5ACP98088 5654 aa1.84□□□□□ -2.11
SLC38A1-201ENST00000398637 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.15
SLC38A1-201ENST00000398637 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.16
SLC38A1-201ENST00000398637 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
SLC38A1-201ENST00000398637 KRTAP5-2Q701N4 177 aa1.48□□□□□ -2.17
SLC38A1-201ENST00000398637 KRTAP5-10Q6L8G5 202 aa1.48□□□□□ -2.17
SLC38A1-201ENST00000398637 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
SLC38A1-201ENST00000398637 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
SLC38A1-201ENST00000398637 KRTAP5-1Q6L8H4 278 aa1.43□□□□□ -2.18
SLC38A1-201ENST00000398637 KRTAP5-11Q6L8G4 156 aa1.43□□□□□ -2.18
SLC38A1-201ENST00000398637 KRTAP21-2Q3LI59 83 aa1.38□□□□□ -2.19
SLC38A1-201ENST00000398637 KRTAP5-7Q6L8G8 165 aa1.29□□□□□ -2.2
SLC38A1-201ENST00000398637 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.26□□□□□ -2.21
SLC38A1-201ENST00000398637 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms