RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 HERC1Q15751 4861 aa3.35□□□□□ -1.87
RGPD2-201ENST00000398146 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
RGPD2-201ENST00000398146 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
RGPD2-201ENST00000398146 HSPG2P98160 4391 aa3.28□□□□□ -1.88
RGPD2-201ENST00000398146 MYCBP2O75592 4640 aa3.26□□□□□ -1.89
RGPD2-201ENST00000398146 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
RGPD2-201ENST00000398146 KMT2CQ8NEZ4 4911 aaKnown RBP3.23□□□□□ -1.89
RGPD2-201ENST00000398146 HERC2O95714 4834 aa3.2□□□□□ -1.9
RGPD2-201ENST00000398146 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
RGPD2-201ENST00000398146 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.16□□□□□ -1.9
RGPD2-201ENST00000398146 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
RGPD2-201ENST00000398146 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
RGPD2-201ENST00000398146 MT1AP04731 61 aa3.15□□□□□ -1.91
RGPD2-201ENST00000398146 KRTAP6-3Q3LI67 103 aa3.14□□□□□ -1.91
RGPD2-201ENST00000398146 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
RGPD2-201ENST00000398146 PCLOQ9Y6V0 5065 aa3.1□□□□□ -1.91
RGPD2-201ENST00000398146 LCE2AQ5TA79 106 aaPredicted RBP3.09□□□□□ -1.91
RGPD2-201ENST00000398146 LRP2P98164 4655 aa3.09□□□□□ -1.92
RGPD2-201ENST00000398146 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.92
RGPD2-201ENST00000398146 BIRC6Q9NR09 4857 aa3.07□□□□□ -1.92
RGPD2-201ENST00000398146 ABCA13Q86UQ4 5058 aa3.05□□□□□ -1.92
RGPD2-201ENST00000398146 RYR2Q92736 4967 aa3.04□□□□□ -1.92
RGPD2-201ENST00000398146 EPPK1P58107 5090 aaKnown RBP3.02□□□□□ -1.93
RGPD2-201ENST00000398146 TNXBP22105 4242 aa3.02□□□□□ -1.93
RGPD2-201ENST00000398146 FSIP2Q5CZC0 6907 aa3.01□□□□□ -1.93
RGPD2-201ENST00000398146 MUC17Q685J3 4493 aa3□□□□□ -1.93
RGPD2-201ENST00000398146 FLGP20930 4061 aaPredicted RBP2.99□□□□□ -1.93
RGPD2-201ENST00000398146 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
RGPD2-201ENST00000398146 KRTAP19-2Q3LHN2 52 aa2.98□□□□□ -1.93
RGPD2-201ENST00000398146 MUC2Q02817 5179 aa2.98□□□□□ -1.93
RGPD2-201ENST00000398146 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
RGPD2-201ENST00000398146 KIAA1109Q2LD37 5005 aa2.94□□□□□ -1.94
RGPD2-201ENST00000398146 KRTAP19-7Q3SYF9 63 aa2.92□□□□□ -1.94
RGPD2-201ENST00000398146 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
RGPD2-201ENST00000398146 FAT4Q6V0I7 4981 aa2.76□□□□□ -1.97
RGPD2-201ENST00000398146 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
RGPD2-201ENST00000398146 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
RGPD2-201ENST00000398146 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
RGPD2-201ENST00000398146 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
RGPD2-201ENST00000398146 RNF213Q63HN8 5207 aa2.69□□□□□ -1.98
RGPD2-201ENST00000398146 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
RGPD2-201ENST00000398146 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
RGPD2-201ENST00000398146 KRTAP4-11Q9BYQ6 195 aa2.63□□□□□ -1.99
RGPD2-201ENST00000398146 HMCN2Q8NDA2 5059 aa2.63□□□□□ -1.99
RGPD2-201ENST00000398146 UBR4Q5T4S7 5183 aa2.61□□□□□ -1.99
RGPD2-201ENST00000398146 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
RGPD2-201ENST00000398146 MACF1Q9UPN3 7388 aaKnown RBP2.51□□□□□ -2.01
RGPD2-201ENST00000398146 NEBP20929 6669 aa2.5□□□□□ -2.01
RGPD2-201ENST00000398146 USH2AO75445 5202 aa2.48□□□□□ -2.01
RGPD2-201ENST00000398146 KMT2DO14686 5537 aa2.41□□□□□ -2.02
RGPD2-201ENST00000398146 DSTQ03001 7570 aaKnown RBP2.38□□□□□ -2.03
RGPD2-201ENST00000398146 KRTAP5-9P26371 169 aa2.24□□□□□ -2.05
RGPD2-201ENST00000398146 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.05
RGPD2-201ENST00000398146 FCGBPQ9Y6R7 5405 aaPredicted RBP2.21□□□□□ -2.06
RGPD2-201ENST00000398146 KRTAP5-5Q701N2 237 aaPredicted RBP2.17□□□□□ -2.06
RGPD2-201ENST00000398146 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
RGPD2-201ENST00000398146 SSPOA2VEC9 5147 aa2.15□□□□□ -2.07
RGPD2-201ENST00000398146 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
RGPD2-201ENST00000398146 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
RGPD2-201ENST00000398146 KRTAP5-3Q6L8H2 238 aa2.03□□□□□ -2.08
RGPD2-201ENST00000398146 MUC12Q9UKN1 5478 aa2.01□□□□□ -2.09
RGPD2-201ENST00000398146 MDN1Q9NU22 5596 aa1.92□□□□□ -2.1
RGPD2-201ENST00000398146 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
RGPD2-201ENST00000398146 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
RGPD2-201ENST00000398146 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
RGPD2-201ENST00000398146 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
RGPD2-201ENST00000398146 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
RGPD2-201ENST00000398146 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.52□□□□□ -2.17
RGPD2-201ENST00000398146 MUC5BQ9HC84 5762 aaPredicted RBP1.5□□□□□ -2.17
RGPD2-201ENST00000398146 KRTAP5-10Q6L8G5 202 aa1.47□□□□□ -2.17
RGPD2-201ENST00000398146 KRTAP5-1Q6L8H4 278 aa1.44□□□□□ -2.18
RGPD2-201ENST00000398146 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
RGPD2-201ENST00000398146 KRTAP5-11Q6L8G4 156 aa1.36□□□□□ -2.19
RGPD2-201ENST00000398146 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
RGPD2-201ENST00000398146 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
RGPD2-201ENST00000398146 KRTAP5-7Q6L8G8 165 aa1.16□□□□□ -2.22
RGPD2-201ENST00000398146 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 53.2 ms